Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.035 1.3e+02 2.5 0.1 23 29 35 41 33 41 0.87

2 4 1.4e-19 5e-16 58.2 8.3 1 29 54 82 54 82 0.98

3 4 7.5e-18 2.7e-14 52.6 5.2 1 29 99 127 99 127 0.97

4 4 6.1e-20 2.2e-16 59.3 5.1 1 29 160 188 160 188 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.035	1.3e+02	2.5	0.1	23	29	35	41	33	41	0.87
2	4	1.4e-19	5e-16	58.2	8.3	1	29	54	82	54	82	0.98
3	4	7.5e-18	2.7e-14	52.6	5.2	1	29	99	127	99	127	0.97
4	4	6.1e-20	2.2e-16	59.3	5.1	1	29	160	188	160	188	0.97

Coding Sequence: ATGgatatatcgaagaaaatgaagcGCTTGGAAGCGCTCATCGAGGTCTATCCTATTAGATCACAGAGAACTAATGATGGATCCTGCATTGAAAATTCGATCCTCTCTGGTTGTCCGCGAGCCGATCGTTCACAAATTCAAGCGCACTCTCAAGAACTGAAGTGTCCAACACCGGGATGCGATGGATCAGGACACGTCACTGGAAACTATTCGTCTCACAGAAGTTTGTCCGGCTGTCCGCGAGCTAATAAACCGAAAAGCAAACCCAGGGATGGACAGGATTCTGAACCATTAAGATGTCCCATCCCAGGTTGTGATGGATCTGGCCATGCTACTGGCAAATTCTTGTCGCATCGCAGTGCATCCGGATGCCCGATCGCAAATAGGAACAAGGCGCGAGTCTTGGAGTCTGGTGGAACAATTGAACAACACAAAGCAGCAATCGCAGCGACGACAGCGATGAAATTTGAAGGTGTCAATTGTCCTACACCAGGCTGCGATGGTATCGGTCATATAAATGGCTCATTCTCAACGCATAGATCTCTATCGGGTTGTCCTATAGCCGGACATGCTGTCAAGAAACCAAAGTTCGAGGATATGTCAAGCATGTACAGCAAAGGAATCCCCGGTGAGGATCTGACAGTTGCTTCTGTCTTTTCATGCGTAACACTACCTCCTATCAAATTATTGATGGAAGagtaa
Protein Sequence: MDISKKMKRLEALIEVYPIRSQRTNDGSCIENSILSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKARVLESGGTIEQHKAAIAATTAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHAVKKPKFEDMSSMYSKGIPGEDLTVASVFSCVTLPPIKLLMEE

Sequence clustering based on sequence similarity using MMseqs2