Basic Information

Insect: Polistes dorsalis
Gene Symbol: -
Assembly: GCA_010416905.1
Location: QUOG01000051.1:54178-56248[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.5 1.7e+02 2.6 0.0 2 16 4 17 3 19 0.79

2 9 0.0039 0.27 11.5 2.2 1 19 199 217 199 217 0.87

3 9 5.9e-06 0.00041 20.3 3.7 1 23 227 249 227 249 0.99

4 9 6.1e-08 4.3e-06 26.6 1.0 1 23 255 277 255 277 0.99

5 9 3.3e-05 0.0023 18.0 1.7 1 23 283 305 283 305 0.98

6 9 7e-07 4.9e-05 23.3 2.3 1 23 311 333 311 333 0.99

7 9 1.4e-07 9.9e-06 25.4 1.7 1 23 339 361 339 361 0.98

8 9 3e-05 0.0021 18.1 2.3 1 23 367 389 367 389 0.97

9 9 3.9e-06 0.00028 20.9 6.8 1 23 395 417 395 418 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.5	1.7e+02	2.6	0.0	2	16	4	17	3	19	0.79
2	9	0.0039	0.27	11.5	2.2	1	19	199	217	199	217	0.87
3	9	5.9e-06	0.00041	20.3	3.7	1	23	227	249	227	249	0.99
4	9	6.1e-08	4.3e-06	26.6	1.0	1	23	255	277	255	277	0.99
5	9	3.3e-05	0.0023	18.0	1.7	1	23	283	305	283	305	0.98
6	9	7e-07	4.9e-05	23.3	2.3	1	23	311	333	311	333	0.99
7	9	1.4e-07	9.9e-06	25.4	1.7	1	23	339	361	339	361	0.98
8	9	3e-05	0.0021	18.1	2.3	1	23	367	389	367	389	0.97
9	9	3.9e-06	0.00028	20.9	6.8	1	23	395	417	395	418	0.95

Sequence Information

Coding Sequence: atgaataaagaATGTCCGAATTGTGGACAAATAACAAATGCGTCAGATTTAAGACTTGTAACAGATAGTTGTGGACATACTAAATGTAGAATGTGTCTTTTGAACGAGGAACAAGGATGTAAATCTTGTCGTAATCTTCCACAAACAATTGGAAGTTtagTTGAGTTAACGAATGACAATCATGCGGATACAGAAAGTTCAGTAGCCacagaagaaataattttaccgTTAGAACTagtcattaataaaaattcaaagtgCATTTATGACGATACTTTTGGTAGCGAAAAAGATTTATACTACAAATTGGAAGAGAGcgagaaaaatttgattaaacattACATTCCTAAGATAGAACCTTGCAATATAAGTACTGATATGCAAATGCATGTAAATAATGATGACGATTTTATATCTCAACCAACAGTCACTTTTAATGACATTTCAACTTCTGTTGCAACAAGAGTAGATATTAGGAAAATAGAATCAAAATCGAAGTCGGTTGAGTTGGTTGATAAAGAACCATCAAAGGATAAACACTTAAAATCTTCTAATAGAAGTCATATATCAATAATACCTGGAAGTCCCGAAAAGTATAAATGTaatgtttgtaataaaatatttaaaaacaaaaaaagtaaatggtACCATGATGCGTGCGTAACTGGAGTTAAGCCTTATCAATGTACACTTTGTGATAAAAGTTTTGTGAAACGATCTCATTTTGAATATCATGAAAGAATTCACAGTGGATATAAAccatataaatgtaatatatgtgAAAAGGCATTTCCACaacaaaacaaattgaatAGACATATGAATTCACATAGTGgTGAAAAACAATTTCCATGTACCAAATGTGAAAAGAAGTATAGTAAAAGAGAAGATTTTAATAACCATTTGAATGTTCATGACAATTCTATTACATATACTTGCACAATTTGTAAAAAAGCTTTCTACATTTTGACAAATTTAAAACGTCATATGAAAACACATACTGatgAACGACCATATATATGTGATCAATGCAGTAAGAGTTTCAAAGATAATTCTTTGCTGATACGTCACAAGAGAACTCATCAAAAAGATAGACCTTTCTCGTGTGCTCATTGCAATAAAGTTTTCTTATCCAAGAGTGAATTAAGGCGTCATCTTACAGTACATTcagaggacaaacCATTTTCCTGCAAATATTGTGAAACAGTCTTCAGAaggaaagataatttaaaacgtCACATTACGCATCATCATACTGAAACTTCAGcaattgaaatgaataaattattaaatattacagaaAATACAAACAATAAGAGGgtattaaaatctaaaaatatgagcacaaaacataaacaaaaagagaaaaagaaacagaaattaATGACTGATGTTATACTAAAACCTCCCAATAAAGTTTTAATCGGTGTTACTAATTTTCACGAACAACCAAACTCTAGATTAGATTCGATGGGTAATATCACACCAGTTATAAGAACAACCACCGAGCTAAGCAATGCTGTACCTGTTATCAATGGTCCTATTTGTATTAGAAAACCCGAAGATAAGactgaaaataataagaagacatttacatatacagaACCGATACCACTTGCCGAAGCTGTTGTTATAAACAGAAGAATCGAAGAGAAGTTATATCCTCAAAATACGTCTTcccataattattttttgtga
Protein Sequence: MNKECPNCGQITNASDLRLVTDSCGHTKCRMCLLNEEQGCKSCRNLPQTIGSLVELTNDNHADTESSVATEEIILPLELVINKNSKCIYDDTFGSEKDLYYKLEESEKNLIKHYIPKIEPCNISTDMQMHVNNDDDFISQPTVTFNDISTSVATRVDIRKIESKSKSVELVDKEPSKDKHLKSSNRSHISIIPGSPEKYKCNVCNKIFKNKKSKWYHDACVTGVKPYQCTLCDKSFVKRSHFEYHERIHSGYKPYKCNICEKAFPQQNKLNRHMNSHSGEKQFPCTKCEKKYSKREDFNNHLNVHDNSITYTCTICKKAFYILTNLKRHMKTHTDERPYICDQCSKSFKDNSLLIRHKRTHQKDRPFSCAHCNKVFLSKSELRRHLTVHSEDKPFSCKYCETVFRRKDNLKRHITHHHTETSAIEMNKLLNITENTNNKRVLKSKNMSTKHKQKEKKKQKLMTDVILKPPNKVLIGVTNFHEQPNSRLDSMGNITPVIRTTTELSNAVPVINGPICIRKPEDKTENNKKTFTYTEPIPLAEAVVINRRIEEKLYPQNTSSHNYFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01234517;
90% Identity: iTF_01234517;
80% Identity: -