Basic Information

Insect: Polistes dorsalis
Gene Symbol: -
Assembly: GCA_010416905.1
Location: QUOG01000014.1:4424371-4426766[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00011 0.0078 16.3 1.6 1 23 310 332 310 332 0.97

2 12 0.0046 0.32 11.2 3.9 1 23 336 358 336 358 0.98

3 12 0.0017 0.12 12.6 6.5 1 23 363 385 363 385 0.96

4 12 9.6e-05 0.0067 16.5 2.5 1 23 437 459 437 459 0.98

5 12 0.00072 0.051 13.8 1.4 1 23 464 486 464 486 0.97

6 12 0.00026 0.018 15.2 2.3 1 23 535 557 535 557 0.98

7 12 0.00012 0.0084 16.2 1.0 2 23 565 586 564 586 0.97

8 12 9e-07 6.3e-05 22.9 2.1 1 23 596 618 596 618 0.96

9 12 0.00021 0.014 15.5 1.6 1 23 624 646 624 646 0.97

10 12 0.00011 0.0074 16.4 0.6 1 23 652 674 652 674 0.98

11 12 4.3e-06 0.0003 20.8 2.0 1 23 680 702 680 702 0.96

12 12 7.7e-05 0.0054 16.8 0.3 1 22 708 729 708 729 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00011	0.0078	16.3	1.6	1	23	310	332	310	332	0.97
2	12	0.0046	0.32	11.2	3.9	1	23	336	358	336	358	0.98
3	12	0.0017	0.12	12.6	6.5	1	23	363	385	363	385	0.96
4	12	9.6e-05	0.0067	16.5	2.5	1	23	437	459	437	459	0.98
5	12	0.00072	0.051	13.8	1.4	1	23	464	486	464	486	0.97
6	12	0.00026	0.018	15.2	2.3	1	23	535	557	535	557	0.98
7	12	0.00012	0.0084	16.2	1.0	2	23	565	586	564	586	0.97
8	12	9e-07	6.3e-05	22.9	2.1	1	23	596	618	596	618	0.96
9	12	0.00021	0.014	15.5	1.6	1	23	624	646	624	646	0.97
10	12	0.00011	0.0074	16.4	0.6	1	23	652	674	652	674	0.98
11	12	4.3e-06	0.0003	20.8	2.0	1	23	680	702	680	702	0.96
12	12	7.7e-05	0.0054	16.8	0.3	1	22	708	729	708	729	0.96

Sequence Information

Coding Sequence: ATGAATTCGAgttgtttcaatttatctcTTAATATGGACAGAATGTGTAGAATATGTCTAAACGAAAGtaacaatttaatatctattttctGCGCTAATCAAGAGGTAAATAATTACGCAGCACTTCCACAAAAAATTCAAGAATGTGGTTCAATTGATATTGATGAGCAAGATGGATTGCCATCTTTGATCTGCGAAAATTGcatttataaagtaaatattgCTCATGAGTTTAGACAACTATGCCAACATTCCAACGCTAGAATAcgattgtattataataatcctgGAAAATGCAATGTTATgGATTCGTGTACGCAAACAGATCTCTCTCCATGCATTGAAATACagaaacaaataacaaatacgCAAGACAATTCTTTTGTTAAACAAGAAATGCAAATAGTATCTAATTCTCAAGATTTTAATAACTCTAATAATACTTATACTACAAATACACCTAGTCTTGCCCCTACTGAAATTGATATGCAAGacgataaaatttttatgaGTTCTATCAGCTTCGAAGATTCTAAAGTGATTGGTAAAGAAGAATGTTCCATAGAAAGCAATATCAATCAAAGTTCAGCGATTGAATCTGCTTCACAAATAGATACGTGTGATATCTATGGAATAATGGATGTTGATGACAAACCTCAAATGGAGGAGCATAGTATTACTAAAGAATCAGAGAAAAATTCTAaaccagaagaagaagaagaagaagaagaagaaataatagaagaacAACAATTTCCAACTGAACGTATGTCTGATGATACGGGGACAGAAAAGGAAGCACCTCCACAGAAACGTACGTCAAGtaggaaaacaaaatcaatGTCAAACAAATCTTACAGCGAAGACGAAGgtgatgataattattatgatcCAAGTAGTGACAGTCAAGACTCGGAAGAATTGAAAttcaaatgtaaaatttgtttgaaacgTTACGCGACACAAAAAGGTTTGAAAAAGCATTCTCTTGTTCATGAAAAGAAGCACAAATGTAGTATTTGTTTGAAACTATTTTATAAACAGGAAAATATGGAAAAGCATAAAAAGATACACGCGTCTAAACCTCACGCTTGCCAATTGTGCCATGCATGTTTTTCTAAATCTCAAAGCCTTATACGCCATTTAAAGTCTCATACGGAAAAAGTGAATGATATGATTAAGCAGATAAATACAGATGAACAAAAAGACGACGAAACTACGAAAAGAGAACTAAAATGCGAGGATGATACTGAAGATGAAAGTGTTACAGTAAACGAACCAGACGAATTTGAAAATGCTCCTGAATTATATAAATGCGAAATCTGCAATCAGTATTGTTCttcgttgaaaaatttaaaaagacatGCTCTCATACATggggataaaaaatattcttgcaCAGTATGTAAAAAGTGGTTCTTCAGACCGGACACGTTAAAAAAACACGCCGAAAAGCATGGGCATGgattattagataatttagTAGATgataacaaattattcgaCTCGGACGATGATGCTTTTCCAAATGATACAACAAATACTTTACCAGAAAatgaaactattaaaaaagaagatagcgAAGAAGATGGATCTGGTGAATACAAGTGCCAACACTGCGACAAAATCATGGCAACTAAGAAAGGTCTTAGGCGTCACGTGTCCATGCACAAGCCTAAAGCTGAACCAGTAACTTgtgaaatttgtaaaaaagtcTGTGCTAGTCAAGCTCGTCTTGTTCTTCATCAAAGGACACATAAACCCAAGGAAAAAGTGCCACGAGAATATTTATGTCATATTTGTAGTAAGGTATATCCGAGTAATTCGTCACTTACATACCATATGAGAACTCATTCAGGAGTGAAACCACATGTTTGCAAAACATGTAACAGTGGATTTACAACAACTACCAGTTTAGCAAATCATATTCGTATTCATACAGGGGACAAACCTTATGTATGTCATGTTTGTAGTGCAGCATTTGCTGTGAGTTCTGCGTTTAGGAGACATTTGACACGACATACGGGTGAAGCAAATTATCTCTGTAAAACGTGCGGCAAAGCTTTTAAGCGACTTAGTACTCTGAAAGAACATACTTATACTCATTCTGGTGAAAAACCTTATGTTTGTAAGACTTGCGGCGCTGCATATAGTCACAGTGGTAGTTTATTCGCACATCAGAAACGTTGTCGTGTCCAATATGGTGAAATGGTTGCAGATGAACATCATCATGCTGTTGCGCATCATATTCATGTAAATAATGTGCAGTCTACGGTGAGATCGCTTACTGTGATAGGGCAGTTGTATTGA
Protein Sequence: MNSSCFNLSLNMDRMCRICLNESNNLISIFCANQEVNNYAALPQKIQECGSIDIDEQDGLPSLICENCIYKVNIAHEFRQLCQHSNARIRLYYNNPGKCNVMDSCTQTDLSPCIEIQKQITNTQDNSFVKQEMQIVSNSQDFNNSNNTYTTNTPSLAPTEIDMQDDKIFMSSISFEDSKVIGKEECSIESNINQSSAIESASQIDTCDIYGIMDVDDKPQMEEHSITKESEKNSKPEEEEEEEEEIIEEQQFPTERMSDDTGTEKEAPPQKRTSSRKTKSMSNKSYSEDEGDDNYYDPSSDSQDSEELKFKCKICLKRYATQKGLKKHSLVHEKKHKCSICLKLFYKQENMEKHKKIHASKPHACQLCHACFSKSQSLIRHLKSHTEKVNDMIKQINTDEQKDDETTKRELKCEDDTEDESVTVNEPDEFENAPELYKCEICNQYCSSLKNLKRHALIHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVDDNKLFDSDDDAFPNDTTNTLPENETIKKEDSEEDGSGEYKCQHCDKIMATKKGLRRHVSMHKPKAEPVTCEICKKVCASQARLVLHQRTHKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHSGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPYVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRVQYGEMVADEHHHAVAHHIHVNNVQSTVRSLTVIGQLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513638;
90% Identity: iTF_01232543;
80% Identity: -