Basic Information

Gene Symbol
ct
Assembly
GCA_010416905.1
Location
QUOG01000021.1:1779764-1813392[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6e-28 4.8e-24 83.9 0.0 2 72 679 750 678 755 0.95
2 3 1.2e-32 8.3e-29 99.1 0.0 2 77 1087 1163 1086 1165 0.96
3 3 1e-30 7.3e-27 92.9 0.0 3 75 1319 1392 1317 1396 0.95

Sequence Information

Coding Sequence
ATGGCAGACGACGAGAAGGGTTctgtggtggtagtggtggtggttgtagTAGTAGGTGGacgaaaagagaatgagaaagagagaaagcttgGATCGAGTAGGCAGAAAGCTtggatgagaaagagaaagagaagagagaaggttGGCGAGCTTGCTTGTCTCCGTACGAGagtaccaccaccatcaccaccatcaccatcaccactactagcaacaacagcagcagcagtacgaccaccaccaccaccaccaccaccaccactaccaccagcaccaccatcACGGCCATCACCGTGGACAATATATCGAATAAGCCACAATGACAAAAAGAGTTGGAGTGGGGTAGTAGtaatggtgatggtggttactgatggtggtggtggtggtggtggtattgGCTATTGCGAAATCGGTCAACTGTTGGACGAGGTGTCAAGGTTACAACAAAATTTGCAACGTCTCCAAGATACAAACGCGCAAGCGACGGCACGCCTCGAGGAAGAACTCGAAGCACGAAGACAACACATCACAAGATTGGAGAGCAAATTGGAACGGCAGAGAGATTACGATGACCTGAAACGCGAGATAAGCGTGTTAAGGTCGGTTGATCTTTCGCAAATTCCAACCGGCGAACCTGGAAAAAGTCTTGAACACCTTTTAATGGAACGTTCCAAGGCCCTTCAACAAGCTGAGAGTTTAAAACCACCTAACACGCCTGACACGCTCgGTGGACTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCATGGGGTCGGAGGTGGGCCACCTTCGTCCCTAGTATCCTCCCAACAAGCCCCACCGCCACCTCCGACCTCGGTTTCCCTCCCGCCACGATCCACGCCGACACCTTCCTCAGCAACATCGACGACTTCCAGCCTTCTCTTCCCCCCGCCTCTCCAAAACGTCGAAACCTTCGGCTCCTTCCTTGGCGAGGAGATCGTCGCCAACTGGAGGCGGACGTTGGAAAGGTCGATCAtaaatcaacaacaacaacaacaacagcaacagcagcagcaacaacaacaacaacagcagcagcagcaacaaacacagcagcaacagcagcagcaacaacagcagcagcagcaagtCCAACAGGTGCAACACCAACAagtgcaacaacaacagcaacagccgcaaccgcaacaacaacaacagcagcagcaacaacaacaagccACTCAAATCTCTCAATTAACGCAACAACAGTTGCAACAAGTCCAACCATTGATAGGACTTCATCCACCTACAACGCCAAGCAGCCTAAATCATCTTCCCTCGCCGACAGAAGCATCGTCCAGTACCAACGTACCGAGTAAATCCAGCACACCATTGGGTACGACGTCAATGGGAACGACGACGTTAACCACGACGAATCTAGCCACGACGGGACTCGGTACAACGTCACTGGGTACGTCGACATTGAGCACGGCGTTGGGTACGACGTTAGGTACGACGTTAGGTACGACGTTAGGTACAACGTTAGGTACGACGTTAGGTACGACGTTAGGGACGACGTTGGGGACGACATCGTTGATCGGTTGTCTTGATCCGAGCGAGAAGGCGTCGACGCCAGTTCCTGGTCACGAAACGCCGGCGCCGCAGACCCCATCCTCGACGAGTGCCATGACATCGCCCCCGAGCTTTCAACCGCCCACGTCGATGGTCGAGACGAGCACCTCCTCCGCCTCCGTCAACGGTGGAGGCGTCACGCCCAGCGCCGTGTCCACGGCGCCGCCACCTAAAAGCCCGGCGGATCAGGAATCCTgtcacaataataataacaacagtCATCATTTAGCTAACAACAATATCGGTGGCTTGAGCGTATTGGACACCTTAAAAAGTCCCTTCCGTTTCGACGACAGAACGCATCCGTTCAGATTCGGTGATGAATTCGGTGCGGTCGGAATGGCCGGTAGACTCGGTGACTCCCTCATACCTAAAGGTGATCCCATGGAAGCGAGATTGCAAGAAATGTTGCGTTACAATATGGACAAATATGCCTCCCAAAATCTGGACACCCTACACATAGCCAGAAGAGTACGAGAACTCTTATCCATACATAATATCGGTCAAAGACTATTCGCCAAATATGTTCTTGGATTGAGTCAAGGTACCGTCAGCGAACTACTCAGCAAACCCAAACCTTGGGATAAACTCACCGAGAAGGGACGCGATAGTTATAGGAAGATGCACGGTTGGGCTTGCGACGACAACGCCGTAATGCTGCTCAAGTCCCTAATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCACCTTTCACGCGTGGACCACAGGAAAGTGGTCCGCCGGAAATGAGCGATGAGAGGTTGGCCCATATCCTCTCGGAATCTGGTCACCTACAAATGAGAGGCGAGCATGAGGTCTCGAACGATGCGGACAGTAAGAGTCCGAGCAGGATTGGCTGTCCGAGTCCGTTTAGTAAGGACAGACTCGAGAGTCAAAATAGGAGACTGAAGAAGTACGAAAACGATGACATTCCCCCGGAAAAGGTAGTCAGGATTTATCACGAAGAGTTAACTAAGCTCATGGGAAGGAGAGTTGAGGATCGACGTGGACCACTAGAATTTCCTCCTAGCGCGGTGTTACCGCATTTTTTCAGCGGTACCCAAGGGCTCCAAGGTATAGAAAGAACACAGGAAGATATCCGATTGGCATTGGATGCTTATCATCGGGAACTACAAAAGTTGAATGCCGGATCTGGACAAAATTCAGCGCTCACCGGTTTGCCAGGATTACCTGGATTACCTGGTTTGTTAGCCCTGCAACAACAAGCTCTTCAACAACATCACTTGGCGACTAACGGCGGTGGTGTACAAGATTTGAGCTTAGGAAAAATGGAtataaggaataaaatgataaacggTGTTAccgaggaagagaaagaaaaaatggaagaagcTATGAGACACGCTGGTAGTGCGTTCTCATTGGTCAGGCCTAAACAAGAAACAACGGGAGCTCAATCGACACCTGGTGGTTCCAGCGCGAGTTCACCGCTCGGTAATTCCATACTACCTCCAGCAATGACGCCTAGTGAAGATTTTTCTGGCGCTGCTGCGGCCAGTCCGTTACAAAGGATGGCCTCCATAACTAACAGCCTAATCAGCCAACCGTCCACTCCGACCCATCATGCTTCGAATCAAAGACCACTTAAAGCAGTTCTTCCTCCAATTACTCAACAACAATTCGACATGTACAATAATCTTAATACCGAAGATATTGTCAAGAGGGTAAAGGAGCAATTGTCGCAGTATTCGATCTCTCAACGTTTGTTTGGTGAATCGGTTCTGGGTCTATCTCAGGGTTCCGTATCGGATCTTCTAGCACGTCCCAAACCTTGGCACATGTTGACTCAAAAAGGACGGGAACCATTCATCAGAATGAAAATGTTCCTCGAGGACGACAACGCGGTTCACAAACTGGTGGCAAGTCAATATAAAATCGCACCGGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACGCCTATGAAACCAATGCCGCCGACGAAGTTGGTTCAGGAACAATTGCAGAATGCGGCGAAAGCGCAAGCAGCAGCCCAGGCTGCGGCCCAAGCAGCGGCACAACATCAGCAAGAGAGTCAAATGCAGTTGGGTCCACCTCAACAGAGTCCGCAACTTCCGCAACATCCTCAGCCACCTTTGCCGATGATGTTGACCCCACCGGGTCCGCATCTTCCGCATGCCCAACTCAGTATGCAAGAACTTCAGAAgaaacaacagcaacagcaacagcaacagatGACGTTGCATTCTCCGCATCATCAGATGACACCGTCACCGTTACGAGGACCTCATTTACACATATCTTCGAGCGTCTATGAGATGGCAGCGTTGACCCAAGATCTCGACACGCAAACTATCACGACTAAGATCAAGGAAGCCTTATTGGCTAACAACATTGGTCAAAAAATATTCGGAGAAGTTGTTTTAGGTTTATCGCAGGGCTCAGTTAGCGAATTGTTGAGCAAACCTAAACCGTGGCATATGTTGAGTATAAAAGGTCGTGAGCCATTCATCAGAATGCAAATGTGGTTGGCGGACGCGCACAACGTTGACAGATTGCAAGCTTTGAAGAACGAGCGAAGAGAGGCTAACAAAAGACGGCGCAGCAGTGGTCCAGGACACGACAACAGTTCGGATACGTCCAGCAACGATACCGCAGAATTCTATCACGCGGCATCGCCTGGTCCGGGCCCGGCATCCGCCAAGAAACAAAGAGTACTATTTTCGGAAGAACAAAAGGAAGCACTTAGGCTCGCGTTCGCGATGGATCCGTATCCGAATGTGAACACGATCGAATTTCTCGCGGGAGAATTAACTTTGTCCTCGAGAACGATAACCAATTGGTTTCACAATCATCGAATGAGATTGAAGCAACAAACGCCGCATGGTCAACCGGAGCCACAATCCCCAAGGGAACCTGGTCAACCGTTCGATCGTGTTCAGTTCAGATTACTGTTGAATCAACGATTGGTAGAAATCCATAAGGAAAGGTTGGGTTTGGGTAACGTACCAATACCATATTCACCTTACTTCAACCCGAACTTAGCAGCGTTGGTTGGCAACGCGTTAAAAGAACAATGTTCCGGCCTAGATCTCTCAATGAGTGCGCTCAAGAGAGAACCTAATCAAGAATTCGAAGATGAGGACGTCGAAGATGCGATGAGCAATCTCGGTAGCGAAGATTCCGAAGGTTCTGCGGGTAGCATAAAAAGAGAACCGGCGGAAACACCAACGGCACCTACCACGGTTAGGTCTAACAGAAGAAAACCTGCGGCACCGCAGTGGGTCAATCCGGAATGGCAGGAACCAACGCGAACGGGAGACGAAGTCATCATTAATGGGGTTTGCGTTATGCAAACGGACGACTATGGTGTTAAAAGAGAAACGGAGGAAACCATTAGGGTTGAACCTACCCCGGTACAGGACAGATACGAGGAGGACGTTCAAAGTGATGTATCGTCGGTATCCGGTAACAATGGTCCGGACAGGGACAGTCCAATGCCCAGTCCAAAATCTGGACAAAATAGTCCAGTAACGTCACCTAGGTCACCCTCGCAAGTACAACAAACAGTACAACAACAATCGACGGATACGAGTCCCAAAGAAATAGTTAAGCACGAGCCCGAAGAAGCATGGGACTATTAA
Protein Sequence
MADDEKGSVVVVVVVVVVGGRKENEKERKLGSSRQKAWMRKRKRREKVGELACLRTRVPPPSPPSPSPLLATTAAAVRPPPPPPPPPLPPAPPSRPSPWTIYRISHNDKKSWSGVVVMVMVVTDGGGGGGGIGYCEIGQLLDEVSRLQQNLQRLQDTNAQATARLEEELEARRQHITRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAESLKPPNTPDTLGGLSSPLQRASTASPHGVGGGPPSSLVSSQQAPPPPPTSVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIINQQQQQQQQQQQQQQQQQQQQQQTQQQQQQQQQQQQQVQQVQHQQVQQQQQQPQPQQQQQQQQQQQATQISQLTQQQLQQVQPLIGLHPPTTPSSLNHLPSPTEASSSTNVPSKSSTPLGTTSMGTTTLTTTNLATTGLGTTSLGTSTLSTALGTTLGTTLGTTLGTTLGTTLGTTLGTTLGTTSLIGCLDPSEKASTPVPGHETPAPQTPSSTSAMTSPPSFQPPTSMVETSTSSASVNGGGVTPSAVSTAPPPKSPADQESCHNNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAVGMAGRLGDSLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPPFTRGPQESGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFSKDRLESQNRRLKKYENDDIPPEKVVRIYHEELTKLMGRRVEDRRGPLEFPPSAVLPHFFSGTQGLQGIERTQEDIRLALDAYHRELQKLNAGSGQNSALTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKMDIRNKMINGVTEEEKEKMEEAMRHAGSAFSLVRPKQETTGAQSTPGGSSASSPLGNSILPPAMTPSEDFSGAAAASPLQRMASITNSLISQPSTPTHHASNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQLPQHPQPPLPMMLTPPGPHLPHAQLSMQELQKKQQQQQQQQMTLHSPHHQMTPSPLRGPHLHISSSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLADAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFAMDPYPNVNTIEFLAGELTLSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDRVQFRLLLNQRLVEIHKERLGLGNVPIPYSPYFNPNLAALVGNALKEQCSGLDLSMSALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPAETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKRETEETIRVEPTPVQDRYEEDVQSDVSSVSGNNGPDRDSPMPSPKSGQNSPVTSPRSPSQVQQTVQQQSTDTSPKEIVKHEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01233539;
80% Identity
iTF_01233539;