Pdor006504.1
Basic Information
- Insect
- Polistes dorsalis
- Gene Symbol
- retn
- Assembly
- GCA_010416905.1
- Location
- QUOG01000021.1:2750493-2758168[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-19 4.2e-16 58.8 0.0 17 89 20 90 17 90 0.95
Sequence Information
- Coding Sequence
- ATGGCTCGGAGACTACCATACttggtggtggttggttggttagttggttcgttggttgGAACCCCGATAAATCGATTACCCATAATGGCCAAATCCGTATTGGATCTTTACGAGCTTTTTAATCTCGTGATAGCACGCGGCGGTTTGGTTGatgttataaacaaaaagCTTTGGCAGGAAATCATCAAGGGTCTCCAACTACCATCTAGCATCACTTCCGCCGCGTTTACTTTACGCACGCAaTACATGAAATATCTTTACGAGTACGAATGCGCTAGAAAAAATTTATCCACCCCTGCCGAATTGAAATTAGCAATCGATGGTAATCGTCGCGAAGGACGTAGGAATACTTATGTACAATTTCCAACCGGATCCGGTAACGACGGTCAAAGAAATCAATCAACGCCATTGTCAATGCGTTCGAGAATGTCACCTAATGCTATGCAATTACACCCACAAATTTCACCGCTTTCTTTGGTAACAGCGGCCGCAGTTACGTCAGCACAATCTATGGTCAATGGTAACTCGGTGCATCCGTCATTGGTGCAACATTCCCAGATATCCCAACTTCCTCAAGCATCGTTGAACCATGCACAAAAtaTATCCCTTACGAGCGTAAATGCGACCGAATTCGAAGCACGAATGGCCGAATACATTAGGATTTATCATAGGGATAAATTTGTTGCAACGACGGGATCGTCACCACCGATAATATCTCAGCCAGGTAGTTCGACACCAACCACAACAACAATACCCATAACTTCAAACATACAAAATTACGAAACACTGCGTAATATTCAAGCTGTGTTTGGTAGTAATAACACGATTTACCCAGCAGCACTTGCGCATCATGCCTCTTTATCACCACAAGCATCACAATCATCGTTGCAACCTGTGCCAAGCCCAGAACCACAAAGAGAAGCATTGGATCTTGGAGTTAGGTCATCATCTGTATGTTCCTCGCCTTCTGTAGCCTGTGGACGAAGCCCTTTATCTTCGACCAGTATTTCACGAAAAAGGGATTCGGATTCAGTTACGTCTGTCCGAAAAAGGCGACTATCCGAAGTGGATGAATCTCCGGAAATGGTTCAACCCTCAACTTCGTCTACCTCGAGAAACATCAAAATTTGCACAGAAACTAACAACGATGATGGTTCATTGAACGTCAGTCTTACAATAGAAGATGCAACTTATCGAGGAGTCCTATTTTTTGATTCAGGATCAAGATCAAAATCTAATTCGTCTAGTTCTAACAGTCCACCAACGACTAATGACAAATAA
- Protein Sequence
- MARRLPYLVVVGWLVGSLVGTPINRLPIMAKSVLDLYELFNLVIARGGLVDVINKKLWQEIIKGLQLPSSITSAAFTLRTQYMKYLYEYECARKNLSTPAELKLAIDGNRREGRRNTYVQFPTGSGNDGQRNQSTPLSMRSRMSPNAMQLHPQISPLSLVTAAAVTSAQSMVNGNSVHPSLVQHSQISQLPQASLNHAQNISLTSVNATEFEARMAEYIRIYHRDKFVATTGSSPPIISQPGSSTPTTTTIPITSNIQNYETLRNIQAVFGSNNTIYPAALAHHASLSPQASQSSLQPVPSPEPQREALDLGVRSSSVCSSPSVACGRSPLSSTSISRKRDSDSVTSVRKRRLSEVDESPEMVQPSTSSTSRNIKICTETNNDDGSLNVSLTIEDATYRGVLFFDSGSRSKSNSSSSNSPPTTNDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01234139;
- 90% Identity
- iTF_01234139;
- 80% Identity
- -