Basic Information

Insect: Polistes dominula
Gene Symbol: stc
Assembly: GCA_001465965.1
Location: NW:1198546-1204987[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 9.5e+03 -4.3 1.6 15 19 463 467 462 467 0.81

2 14 0.078 3.7e+02 0.4 0.4 4 10 496 502 495 502 0.95

3 14 4.5e-06 0.021 13.9 12.7 4 18 513 527 511 528 0.95

4 14 2.3e-07 0.0011 18.0 18.2 1 18 564 581 564 582 0.97

5 14 1.6 7.7e+03 -3.8 1.0 6 10 610 614 609 614 0.87

6 14 2.2e-07 0.0011 18.1 14.1 1 18 620 637 620 638 0.98

7 14 0.31 1.5e+03 -1.5 1.3 5 10 667 672 667 672 0.96

8 14 5.2e-06 0.024 13.7 13.2 4 18 685 699 678 700 0.86

9 14 1.5 7e+03 -3.7 2.0 5 10 729 734 729 734 0.93

10 14 0.013 62 2.9 11.3 1 11 740 750 740 762 0.88

11 14 6.6e-11 3.1e-07 29.4 14.0 1 19 767 785 767 785 0.98

12 14 2 9.5e+03 -6.6 8.0 14 19 837 842 824 842 0.77

13 14 7.7e-06 0.036 13.2 15.3 1 16 878 893 878 904 0.87

14 14 2.9e-06 0.014 14.6 12.3 1 19 910 929 910 929 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	9.5e+03	-4.3	1.6	15	19	463	467	462	467	0.81
2	14	0.078	3.7e+02	0.4	0.4	4	10	496	502	495	502	0.95
3	14	4.5e-06	0.021	13.9	12.7	4	18	513	527	511	528	0.95
4	14	2.3e-07	0.0011	18.0	18.2	1	18	564	581	564	582	0.97
5	14	1.6	7.7e+03	-3.8	1.0	6	10	610	614	609	614	0.87
6	14	2.2e-07	0.0011	18.1	14.1	1	18	620	637	620	638	0.98
7	14	0.31	1.5e+03	-1.5	1.3	5	10	667	672	667	672	0.96
8	14	5.2e-06	0.024	13.7	13.2	4	18	685	699	678	700	0.86
9	14	1.5	7e+03	-3.7	2.0	5	10	729	734	729	734	0.93
10	14	0.013	62	2.9	11.3	1	11	740	750	740	762	0.88
11	14	6.6e-11	3.1e-07	29.4	14.0	1	19	767	785	767	785	0.98
12	14	2	9.5e+03	-6.6	8.0	14	19	837	842	824	842	0.77
13	14	7.7e-06	0.036	13.2	15.3	1	16	878	893	878	904	0.87
14	14	2.9e-06	0.014	14.6	12.3	1	19	910	929	910	929	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGCTCATGTCACGAACCAGaagattcaaattattttttttattcgggTCAAAATAGTGCCATACATAATCTAGAAAGTTGGACTTTTTATCCCAGTAATGGGAGCAACGTTTTTTTTCATAGTACTCATGCACCATATTCGCAAAATACTTCAATGATGTTGGGACAAGGTGAACAACAGCATATTGCTGCTTCGTGTCAAACGGATCCTAACTTTTCATCAAGTTCATTAAATTCAATGCCTTTAAGAGACGCTTGCCCAGATTACTTAAATGCCACAGGCGGCAGCGCACAAGACTGTCAAGATGTTACTACTCGCAACAATAGCACCATTGTCGAACATTCCAATTTACATCCCACTGCAAATGAATTTGTACCGCATGGAATGAAAAATTACACAAATCAAACTAACGCAAGTATAAATGTTTCTAATTCGGAAGAATCTAAAGTTAATTTACCGCAAGAAACTTATTCTACTGATAATgcgaacaaatataaaaataagaaatataatgcgaagaaaaatcattcttacaaatacaaagaaacgcaggattataattttcaaaggcaaagaaattcatttcaaaattcttataaaactCAACATGGcagaaattatagaaaatattcaaatgCTTCTGAAGAATCAGGAGGTATGTTTTATAATCCTAAAAATAATGCAACCAACGATGAAACTCAGAGGAATGACAAATTGATGAATGTTGATGCAAATAATGTCAATGCAAATAAAACTAATGTATCTAACATCGAAGAAGAACATGAAATCAATGATCATGTAAAAgctgataaagaaaataccgATGCTACTGGTGGAACTACGAGTCAAAATTATGAACAATCGagtagaaataattatcaacgTCATAATACTAATTATGGAACACAACGTATTCCTGCTAAATATGGTAAAAAAGTATCAAATGATCGGAAAATtggtaaatatgataataattatcgtgagagaaaaaataattatcaggagtataataattacaaggaAAGACATGAAGAAAGTAAAGTAGATACTACTaaggataaatataaaaacaaagatataaaTCAAGAAACTAAATCGATAGAAATTGTTAATTGGAGACAAAAGGGAGAAAACaatgataaaagtaatattactaAACGAAAGACGAATAAAAAGCACgaagATGATGATGCAagtcaaagagaaagattaaCAGATCAGTTAAATAGAGGACAATTGGAATGTTTAGTATGTTGCGaatatatcaaacaaaatgattacatTTGGTCTTGTTCCAATTGTTATCatgttttacatttaaagTGTATCAAAAAGTGGGCAAAATCTTCTCAAGCAGAAAATGGTTGGAGATGTCCCGCGTGTCAAAATGTGAGCACTATGATTCCTGAAGAATACTTTTGTTTCTGTGGGAAAACAAAAATGCCTGAATGGAATCGCAGAGATATGGCTCATTCTTGTGGTGAAGTTTGTGGAAGATCTCGAATCAAAAATAACTGCCCTCATAAATGTACTTTGTTGTGTCATCCAGGATCTTGTCCGTCATGTATAGCAATGGTAACAAAAAATTGTGGTTGTGGTAAAACATCACAAACGTTACAATGCTGTACATTAACACTATTACTCTGCGATTCTATTTGTggtaaattattgaattgcGGAGAGcataaatgtgaaaataaatgtcatcATGGGGAATGTGAACCTTGTAATAAAGTTAAACAACAAgaaTGTTATTgtggaaaaagtaaaagagatgTAACTTGTCAATCTGACGTATCTTCAACATATTCCTGTGAAAATACCTGTGATAAGGTATTAGATTGTGGAAATCATAAATGCAAAAAGCCTTGTCATTCCAATTCATGCGAGCCTTGTGCATTTACACCTGATAAAATTACAACATGCTGTTGTGGACGAACACCACTGTcagatgaaagaaaatcttGTTTAGATCCAATTCCAACTTGTGAAGAGATATGTTCTAAACGTCTTAATTGTGGTCAACCTAgTAATCCACACACGTGCAAGGTAAAGTGTCATCAAGGAGATTGTCCTGAATGTGATTTAACAACGGACGTTAAATGTCGTTGCGGTAATATGGATAGAGAAATTCAATGTAAAGATTTAACGACCAAGGCGGATGATGCACGTTGTGAAAAGAAGTGCATTAAAAAGAGATCTTGCGGAAAACATAAGTGTAATCAAATGTGTTGCATTGATCTTGAACATATTTGTCCTTTACCTTGTTCTAAAACATTAAGTTGCGGTAGACATAAATGTGAACAAACCTGCCATAAAGgTAGGTGTCAACCTTGCTGGCGAAGTAGTTTTGACGAATTGTATTGTGAATGTGGTACAGCTGTAATATATCCACCTGTACCCTGTGGAACTAGACGACCCATTTGTAATAAACCTTGTTCACGTGATCATTCTTGTGGTCATGaagtatttcataattgtcACAGTGAATTGACATGTCCCCCATGTACTTATCTTACTGAAAAATGGTGTTATGGCAAGCACGAACTTAGAAAAGCTGTTCCATgctattttaatgaaatttcatgTGGCTTAATGTGTAATAAGCCTTTGTCTTGTGGAAGACATAAATGTATAACTACATGTCATCCTGGATCATGTGAAAAGCCAGGACAGCAATGTGTTCAACCATGTAATACATTAAGAGAATTATGCGGGCATATATGTGCGGCTCCATGTCACGAGGGCAAATGTCCTGATATACCTTGTAAAGAAATGGTTAAAGTAACGTGTCAATGTGGACATAGAAGTACAACCAGAGTATGCGAAGAAAATTCGCGAGAATATCAAAGAATAACCAGCAACATTTTAGCTAGTAAAATGGCTGATATGCAACTAGGTCATTCTGTTGATTTAGAAGAACTTTTTGGACCAGGagcaaagaaacaaaatcaattgaaaattctCGAATGTAGTGatgaatgtaaattaatagaaCGTAATAGAAGATTAGCATTAGGACTTCAAATTGTTAATCCAGATTTAAGTGGAAAATTAATGCCAAGATATACCGATTATATGAAACAATGGGCAAAAAAAGATCCTCATTTTTGTCAAATGGTTCATGACAAATTAACAGAATTAGTTCAACTAGCAAAGACttctaaacaaaaatcaagAAGTTATTCATTTGATAGTATGAATAGAGATAAGCGTCGTTTCATTCACGAATCTTGCGAACATTTTGGTTGTGAAAGTCAAGCATATGATTTGGAACCAAAAAGAAACGTTGTTGCTACTGCTGTAAAAGATAAGTGTTGGTTACCAAGTTATagtttattagaaattgtGCAAAGAAACAATGGACAAAGAAAAGTTCCAGGCCCGATATTGAATACTACAAAAGCCAACAGTTCAATAAAGACAATCTTAGCATTACCTGCAAAAAGAAATCAACAAGTTGTACCAACTCCATCAACTTCTTCAAGATCACCAGAACCAGAACCAGAAAtagattatttctattataaaggttattaa
Protein Sequence: MATWDGSCHEPEDSNYFFYSGQNSAIHNLESWTFYPSNGSNVFFHSTHAPYSQNTSMMLGQGEQQHIAASCQTDPNFSSSSLNSMPLRDACPDYLNATGGSAQDCQDVTTRNNSTIVEHSNLHPTANEFVPHGMKNYTNQTNASINVSNSEESKVNLPQETYSTDNANKYKNKKYNAKKNHSYKYKETQDYNFQRQRNSFQNSYKTQHGRNYRKYSNASEESGGMFYNPKNNATNDETQRNDKLMNVDANNVNANKTNVSNIEEEHEINDHVKADKENTDATGGTTSQNYEQSSRNNYQRHNTNYGTQRIPAKYGKKVSNDRKIGKYDNNYRERKNNYQEYNNYKERHEESKVDTTKDKYKNKDINQETKSIEIVNWRQKGENNDKSNITKRKTNKKHEDDDASQRERLTDQLNRGQLECLVCCEYIKQNDYIWSCSNCYHVLHLKCIKKWAKSSQAENGWRCPACQNVSTMIPEEYFCFCGKTKMPEWNRRDMAHSCGEVCGRSRIKNNCPHKCTLLCHPGSCPSCIAMVTKNCGCGKTSQTLQCCTLTLLLCDSICGKLLNCGEHKCENKCHHGECEPCNKVKQQECYCGKSKRDVTCQSDVSSTYSCENTCDKVLDCGNHKCKKPCHSNSCEPCAFTPDKITTCCCGRTPLSDERKSCLDPIPTCEEICSKRLNCGQPSNPHTCKVKCHQGDCPECDLTTDVKCRCGNMDREIQCKDLTTKADDARCEKKCIKKRSCGKHKCNQMCCIDLEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELYCECGTAVIYPPVPCGTRRPICNKPCSRDHSCGHEVFHNCHSELTCPPCTYLTEKWCYGKHELRKAVPCYFNEISCGLMCNKPLSCGRHKCITTCHPGSCEKPGQQCVQPCNTLRELCGHICAAPCHEGKCPDIPCKEMVKVTCQCGHRSTTRVCEENSREYQRITSNILASKMADMQLGHSVDLEELFGPGAKKQNQLKILECSDECKLIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNRDKRRFIHESCEHFGCESQAYDLEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPILNTTKANSSIKTILALPAKRNQQVVPTPSTSSRSPEPEPEIDYFYYKGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01235401;
90% Identity: iTF_01235401;
80% Identity: -