Pdom003417.1
Basic Information
- Insect
- Polistes dominula
- Gene Symbol
- grn
- Assembly
- GCA_001465965.1
- Location
- NW:715945-825507[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-19 3.1e-16 57.8 4.7 1 35 508 541 508 542 0.98 2 2 3.6e-17 4.8e-14 50.8 5.9 1 35 562 595 562 596 0.97
Sequence Information
- Coding Sequence
- ATGATGGATATGAGCAGCGAGTCTAGTGCAGCAAGATGGTACGAACCACCCCGAACGTCCCTGGAGCCGCCCTCGGCGGCAGCCGCTGGGGTGGCCGGAGTCGTTGGCAATCCCACCGACTACAGGGGTTACTACCCCCATGCCGGACCTACCCCCCACCACCCTGCCGCCGCGGCGGCGGCGCACTACGCCCACACGAGAATGTCGAGTAGCGGTGTGACAAGCGGTCCAGTAAGTCAAGTTTGTCGGCCGCACTTTCACAGCACGGTATTACATCCGTGGTTGTCCGGTAGCGGGGCGGATACCTCTAAAACGCCATGGGGTTTTCCAACGACAACGGCATCGACCGGTGGTACAGTAAACGACGACAAACCACAGAGTCCATTGGGTTCATCTTTACCACCCACAACGGGTAGTTTATCGAGTCACGGGGCTGGCGGCGGGGGTACGCACCAtctgttttcttttccccCAACGCCGCCGAAGGATGCTACGCCCGATAGTATAACCGCGAGTACGACGTCTAGTTCTAATAACAATGCGACAAACAACAGCGGTAGCGGgagcaacaacaataacaacggTAGCGGAGCGAACTCTTTGGGAGGATTGGGTGGTGGAGGTAACAGCGAGTACCAAGCAGCCGTGGCCCATGCAGCGGTTATGGGTGCGTTTATGCATCATCAGGATGCGCTGGGAGCCGGCGGGGCGGGTAGTTGCGACGTTAAACCTACGGTTATGTTGGGTCATCATCATGGTGGTGCACCATCGCCGCCACATCAACAGCACGGAGGGAACGCGGGGAACAACGGTGGTGGTAGCAGTAACAACACGGCGGCCAGTTCGGGACAGGTGAAACAACGCGAAGGTAATAACCAATCGGGAAGTGGTCAACAACAAGCGAATGGCTctcaacagcaacagcaacaacagcaagcggcacagcagcagcagcagcagcaacaggaCGCGTATCAAAATAACAACGGGGCCAGCTCGCCCTGCGGAAGGGACAGCTAtgccgccgccgccgctgCGGCCTCGGCGGCACAATATGACCAGGCGACGAGTGCCTACAACATGTATCAACATTTGCAGTACCCCAACGCTgcccaccaccatcaccatcatcatcatcatcatttgaaTGGTGGTGGGGGTGCTGGGGGAGGCGGCGGCTCCGGCGGCACGGCCacgtcctcctcctcgtcgtcCTCCGCGTCGTCCCACAATCCgcataacaacaacaacaacaacaataacaacaacaacagcaacaacaacggcAACTCCGGGAACTCGGGGACGACGGTCGGCGCTCTTTTCGCCGCGGCGGCGCATCACGGCGCCGGTGGTAACCCTAATTCTGGTGTACCCGGTGTCGTGAGCCCTGCCGATTCGAAGCTACTTTCGGCTCACGCGAGCAACGCGCATTCCAACAATCCGGGCTCGCCCGGCGCGCATCAGCATCATCAGCAAAAGCCCAGGAACAAGTCGAGAACGTCCGCCGAGGGTCGTGAGTGCGTTAATTGCGGTGCAACATCGACACCTTTGTGGAGACGAGATGGTACTGGACATTACCTCTGCAATGCTTGTGGTCTTTACTACAAAATGAATGGACAAAATCGACCACTAATCAAACCTAAACGACGCCTTAGTGCGGCGAGACGGGCGGGCACCAGCTGCGCAAACTGCAAAACCGGAACGACGACACTTTGGCGAAGGAATCAAGCCGGTGAACCAGTATGCAACGCATGCGGTCTCTACTACAAACTGCATAATGTTAATCGGCCATTGACgatgaagaaggaaggaatacAAACGAGGAATAGAAAACTATCGTCaaagagtaagaagaagaaggcagGTAGTTGTCTAGGATTGGGTGGTGTCATGGGTGATGTCATGATCAAAGCTGGTGGACACATTGATCTTGACAACAAACCTTTCCATTCAGGATTTGGATCACCTATGGGTAAgcattaa
- Protein Sequence
- MMDMSSESSAARWYEPPRTSLEPPSAAAAGVAGVVGNPTDYRGYYPHAGPTPHHPAAAAAAHYAHTRMSSSGVTSGPVSQVCRPHFHSTVLHPWLSGSGADTSKTPWGFPTTTASTGGTVNDDKPQSPLGSSLPPTTGSLSSHGAGGGGTHHLFSFPPTPPKDATPDSITASTTSSSNNNATNNSGSGSNNNNNGSGANSLGGLGGGGNSEYQAAVAHAAVMGAFMHHQDALGAGGAGSCDVKPTVMLGHHHGGAPSPPHQQHGGNAGNNGGGSSNNTAASSGQVKQREGNNQSGSGQQQANGSQQQQQQQQAAQQQQQQQQDAYQNNNGASSPCGRDSYAAAAAAASAAQYDQATSAYNMYQHLQYPNAAHHHHHHHHHHLNGGGGAGGGGGSGGTATSSSSSSSASSHNPHNNNNNNNNNNNSNNNGNSGNSGTTVGALFAAAAHHGAGGNPNSGVPGVVSPADSKLLSAHASNAHSNNPGSPGAHQHHQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSAARRAGTSCANCKTGTTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGSCLGLGGVMGDVMIKAGGHIDLDNKPFHSGFGSPMGKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01235387;
- 90% Identity
- iTF_01232693;
- 80% Identity
- -