Pdom003266.1
Basic Information
- Insect
- Polistes dominula
- Gene Symbol
- retn
- Assembly
- GCA_001465965.1
- Location
- NW:1319551-1465217[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-24 2.4e-21 75.0 0.0 2 89 212 297 211 297 0.96
Sequence Information
- Coding Sequence
- ATGGAGATGAGCGACGATTATCAAGACATGGTCAATCCTGGTGGAGGGATGTCCAATCTCCAACCCATGGGGGGACATCATCGGAACACACCTGAGAGCACCTCAACGGAAGCCGATGTACTGTCAAGAACAAATTTGGAAGCGTTCCAGGCTGCTGTCAGCAATGGGGTTATAAATTTGCCAGGATTTATACCCATAATGCCATTATCAAATATGGGAATTGGTGGAATGATACAAGCTTCTTCATCGTCAACCCCCATGCAAGTTGCTGGAGATGGTCCTAGTACATCGTCATCGATGCAACAAGTGTTAAATGTACCACTTGGTAACAACAACCAGGATGCAACCAGCAGTCCTTCACGTTCCAGTGAATCTCCACAAGGATCAAGAAATGGGCCTGATTCTGCTACCAATTATTCACTCAATGTCAGCAACAAtaccaataataatcatcatcatcattcccACAACAGTAGTGCCAGCAGCAGCAgtcagaataataataataacaacaacaacaacaatagcagtcagaataataataatcatacttCACAGAATGGTCAGCAACCTAACAATTGGAATTTTGAAGATCAATTCAAACAGTTGTACGAGCTCAGTGATGATCCAGGCAGACGAGAATTTTTGGACGATTTGTTTAGCTACATGCAAGCACGCGGATCACCGATAAATCGATTACCCATAATGGCTAAATCAGTATTGGATCTTTACGAACTTTTTAATCTCGTGATAGCTCGTGGCGGATTGGTTGatgttattaacaaaaaactaTGGCAGGAAATCATCAAAGGTCTACAACTACCATCCAGTATCACTTCCGCCGCATTTACTTTACGCACGCAatatatgaaatatttatacgacTACGAATGcgatagaaaaaatttatcaacCCGTGAAGATTTACAATTAGCCATAGATGGTAATCGTCGTGAAGGACGTAGAAATACTTATGTACAATATCCATCTGGATCTGGTAGCGATGGTCAAAGAAATCAATCAACGTCATTGTCAATGCGTTCGAGAATATCGCCTAATGCCATGCAACTGCATACACAAATTTCACCACTTTCATTGGTTACGGCAGCCGCTGCAGTTACTTCAGCACAATCCATGGTCAATGGTAATTCGATGCATCCGTCTTTGGTGCAACATTCACAATTACCACAACTTCCACAAGCAACTTTGAATCATTCACAAAatttTCCAGTTTCCCTTACGAACGTAAATCCAAGTGAAATTGAAGCACGAATGGCAGAATATTTTAGGTTGTATCATAGAGATAGAATAGTTGCAACGGCAGGATCGTCACCATGTCAGCAAGGTACTTCGACACCAACCACAACAACCATACCCATATCTTCAAACATACAAACTTACGAAACATTGAGCAAATTTCAAGCAGTTTTTGGTAGTAATAACACGATTTACCCAGCAGCACTTGCGCATCATTCCTCTTTATCACCACAACCATCACAATCCTCGTTGCAACCTGTGCCAAGCCCAGAACCACAAAGGGAAGCATTGGATCTTGGTGTTAGGTCATCATCCGTATGTTCCTCACCTTCTGTAGCTTGTGGACCAAGCCCATTATCTTCAACCAGTGGTCAACGAAAAAGGGATACGGATTCAGTTACGTCTGGTCGAAAAAGACGATTATCCGATGAGGATAAATCTCCAGAAACTGCTCAACCATCAACCTCATCTAATCCACGAAACATCAGAATTTGCACAGaaGCTAACAACGATGAGGGTTCATTGAACGTCAGTCTTACAATAGAAGATGCAACTTATCGAGGAGTCCTATTCTTTGATTCAAGATCAGGATCAAAATCAGATTCATCTAGTTCTAGAAGTCCACCAACGAATAATGACAAATAA
- Protein Sequence
- MEMSDDYQDMVNPGGGMSNLQPMGGHHRNTPESTSTEADVLSRTNLEAFQAAVSNGVINLPGFIPIMPLSNMGIGGMIQASSSSTPMQVAGDGPSTSSSMQQVLNVPLGNNNQDATSSPSRSSESPQGSRNGPDSATNYSLNVSNNTNNNHHHHSHNSSASSSSQNNNNNNNNNNSSQNNNNHTSQNGQQPNNWNFEDQFKQLYELSDDPGRREFLDDLFSYMQARGSPINRLPIMAKSVLDLYELFNLVIARGGLVDVINKKLWQEIIKGLQLPSSITSAAFTLRTQYMKYLYDYECDRKNLSTREDLQLAIDGNRREGRRNTYVQYPSGSGSDGQRNQSTSLSMRSRISPNAMQLHTQISPLSLVTAAAAVTSAQSMVNGNSMHPSLVQHSQLPQLPQATLNHSQNFPVSLTNVNPSEIEARMAEYFRLYHRDRIVATAGSSPCQQGTSTPTTTTIPISSNIQTYETLSKFQAVFGSNNTIYPAALAHHSSLSPQPSQSSLQPVPSPEPQREALDLGVRSSSVCSSPSVACGPSPLSSTSGQRKRDTDSVTSGRKRRLSDEDKSPETAQPSTSSNPRNIRICTEANNDEGSLNVSLTIEDATYRGVLFFDSRSGSKSDSSSSRSPPTNNDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -