Basic Information

Insect: Polistes canadensis
Gene Symbol: zfh1
Assembly: GCA_001313835.1
Location: NW:132523-152009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00069 0.043 13.4 2.7 2 23 151 173 150 173 0.93

2 7 6.5e-06 0.00041 19.7 0.6 2 23 193 214 192 214 0.97

3 7 4.1e-06 0.00025 20.4 7.8 1 23 223 245 223 245 0.99

4 7 1e-05 0.00063 19.1 1.9 1 21 251 271 251 272 0.95

5 7 0.00016 0.01 15.4 4.5 1 23 724 746 724 746 0.94

6 7 0.0022 0.14 11.8 10.3 1 23 752 774 752 774 0.98

7 7 0.0011 0.067 12.8 4.3 1 21 780 800 780 801 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00069	0.043	13.4	2.7	2	23	151	173	150	173	0.93
2	7	6.5e-06	0.00041	19.7	0.6	2	23	193	214	192	214	0.97
3	7	4.1e-06	0.00025	20.4	7.8	1	23	223	245	223	245	0.99
4	7	1e-05	0.00063	19.1	1.9	1	21	251	271	251	272	0.95
5	7	0.00016	0.01	15.4	4.5	1	23	724	746	724	746	0.94
6	7	0.0022	0.14	11.8	10.3	1	23	752	774	752	774	0.98
7	7	0.0011	0.067	12.8	4.3	1	21	780	800	780	801	0.96

Sequence Information

Coding Sequence: atgaaaaaaagtataacgcGCGAAACGCGAAACCGAATAGCTGCGCTTTCGCGAGTTATGACCATGACTCTTAGTCGGAACGTTTACGAAGATTCCAGCGAGGACGAAGCAGGTGGTGCGGACGTAGGCACGAAGGTGAAGACGGCGACAGCCGAAGGTTGTGCCGCTGAAGCCACGTCGGCCGTACTCGACGAGGATGCCGGCGGTGGCTGTGGcggtggtgatggtgttggtggtggtgttggtgccGGTGGTGCCGGTGCCGGTTCCGGTCAACAAATTCTTGGAATCGGCATCGGCGGTGGTGTCGGCGGCCTCAGCAACGATGGAGTCAATCGAAGAATtaatagtggtggtggtggtggtggtggtggtagtagtaatatTAGTAGTGTCGAAGGTGCCGATGATAACGAGGAAGGACCaaagataaaacaagaaaacggCCAAACTTGTTCACACTGCGGTATACACTTCCGGAACGCTCACGTACTTCAACTTCATATGGAGGATGCACACAAGACGTTGTTGTATTCGTCAGACAAAAATGATCTTAACGCACAATTTTCACAAGTGtCGTGCAAAGTGTGCAACAAAACTTTCGCCAATGTCTACAGATTACAAAGGCATATGATCAGCCACGACGAAAGTGCTGTCTTGAGAAAATTCAAGTGTCCGCATTGTGAGAAAGCATTCAAATTTAAACATCATCTTAAGgaaCATTTGCGTATACACAGCGGCGAGAAACCGTTTCAATGTAACAACTGCGGCAAAAGATTTTCGCATTCTGGTTCTTATTCGAGTCATATGACTTCGAAAAAATGCTTAATCGTTAATTTGAAGAAGTCTAGACAAAACAGCAGCAACATCggtaatatagaaaaatgttcgaaGAAAACGCCCACGCAATCGGTTCCTGGCGTCAGACGCGATGATACATTTCTTGCGGCTaacaataatacttttttaccgATACTGCCAAAGCTTTCTCCTTCGGATTATCAAGAAATACGAGAAGGTGGTGGTATTTACGACGGACCAAGTCTTTTACCCTCGATGATGGGTTTTACCAATTACTTCCTACAATCCTCATTGGGAAAGATATTAAATCAAGTGCATTCCAAACGGCTCGACGAAATAGCAGAAAAATTTGAGACCCATCGAGAAACGATGAGTCCATTGACTGCAGATTCGGAGGGTACGGAAGGTACAGAAGGGAAGGAATCACCTGCTCCGATTGGATCGCGAGGGTTGGACGCTGTTCGTCGTATTTTAGAGACTGTCAATACCTCTGTCACTAAGGAATtgttagaagaaaatgttaaaaaattgtctACCTCAATATTCAGTTCTCCTATAATGAGACGAGAATTGGAAAACGAGCTTGGAGAATATCATGATCAGGATAGCGAAATATCGAACGAGATGCCCCATTATGATTGGTCGTTAACAACGGATCAGTATGATTCTCAAAGCGAAGGTTTAGCTGCCAAATTGGAAGATGCTAATCAACCGCAAGGTGTGACCACCAGGTTATCTTCTAAAAGAAAAGCTGACGATAGTTCCGAGCAGGATACCGATGACGAAGAAGATAGCAATCAAACGCATACGGAGAATGGTAGAAGAGTAAGGGCGAGGTCTTTGATAGACGATGAACAATTGGCTGTTCTCAAAGGTTACTATGCTATCAATCCGAGGCcaaagaaagaggaaattattatgattgcgaattatattaatttctcaaCTCGTGTCGTCCAgGTTTGGTTTCAGAATTCTCGTGCAAGGGATCGTAGAGAATCGAGAATTCCAGCATTGTTACCACTTTCAAGTCCAACAACCTTTGAACAACCCTTGGATTTGTCGAAGAAAGATGTCCTAACGATATCCCTCGTAAAAGATGGCGATACATCTAATGGAAATATTGCTTCTCCTCCttgcgaaaaaaaagaagacactTCTTCGACTGTTGCAAATCAAGAAACTGACGATCTCGAGGATTCGCCTCTTGTTATCGACGAAGAAATGAACGATTCTGTCGAATCGAAACGTATGCCTTCCGTGCTCGATGTTTCGCAAaagagCCAAAATCTTGGGAACgccaaaaaggaaaatgagaaTCCAGTTAAGATCGAACCGCCTACCACAACAGACACCGAACAAGGACTTTATTTTTGTGATCGTTGCGACAAAACTTTTTCGAAACATAGTTCACTCGCGAGACACAAGTATGAACATTCCGgGCAAAGGCCACACAAATGTGTGGAGTGTACAAGAGCGTTCAAGCATAAACATCATCTAACCGAACATAAGCGGTTGCACAGTGGCGAAAAACCCTTTCAGTGCTCCAAGTGCCTCAAACGCTTTTCTCACTCCGGCTCCTACAGCCAACACATGAATCACCGTTCCTCTTACTGTAAACCTTACAGAGAGTAA
Protein Sequence: MKKSITRETRNRIAALSRVMTMTLSRNVYEDSSEDEAGGADVGTKVKTATAEGCAAEATSAVLDEDAGGGCGGGDGVGGGVGAGGAGAGSGQQILGIGIGGGVGGLSNDGVNRRINSGGGGGGGGSSNISSVEGADDNEEGPKIKQENGQTCSHCGIHFRNAHVLQLHMEDAHKTLLYSSDKNDLNAQFSQVSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRQNSSNIGNIEKCSKKTPTQSVPGVRRDDTFLAANNNTFLPILPKLSPSDYQEIREGGGIYDGPSLLPSMMGFTNYFLQSSLGKILNQVHSKRLDEIAEKFETHRETMSPLTADSEGTEGTEGKESPAPIGSRGLDAVRRILETVNTSVTKELLEENVKKLSTSIFSSPIMRRELENELGEYHDQDSEISNEMPHYDWSLTTDQYDSQSEGLAAKLEDANQPQGVTTRLSSKRKADDSSEQDTDDEEDSNQTHTENGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIIMIANYINFSTRVVQVWFQNSRARDRRESRIPALLPLSSPTTFEQPLDLSKKDVLTISLVKDGDTSNGNIASPPCEKKEDTSSTVANQETDDLEDSPLVIDEEMNDSVESKRMPSVLDVSQKSQNLGNAKKENENPVKIEPPTTTDTEQGLYFCDRCDKTFSKHSSLARHKYEHSGQRPHKCVECTRAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRSSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513696;
90% Identity: iTF_01233882;
80% Identity: iTF_01232316;