Basic Information

Insect: Polistes canadensis
Gene Symbol: Cpsf73_1
Assembly: GCA_001313835.1
Location: NW:510765-521505[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 63 3.4 0.1 3 23 23 43 21 43 0.94

2 15 1 65 3.4 2.7 1 19 898 916 898 921 0.75

3 15 0.003 0.19 11.4 1.9 2 23 1002 1024 1001 1024 0.96

4 15 0.0086 0.53 9.9 0.1 2 23 1037 1058 1037 1058 0.98

5 15 2.3e-05 0.0014 18.0 2.1 2 23 1061 1082 1060 1082 0.97

6 15 0.025 1.5 8.5 0.4 1 23 1088 1110 1088 1110 0.95

7 15 2.5e-05 0.0016 17.9 4.5 2 23 1117 1138 1116 1139 0.95

8 15 0.17 11 5.8 1.7 5 23 1152 1170 1151 1170 0.96

9 15 2.3e-05 0.0014 18.1 1.5 3 23 1177 1198 1176 1198 0.97

10 15 0.01 0.64 9.7 0.3 2 23 1214 1234 1213 1234 0.97

11 15 6.8e-05 0.0043 16.5 0.7 1 20 1240 1259 1240 1262 0.92

12 15 8.5e-05 0.0053 16.2 2.7 1 23 1270 1292 1270 1292 0.99

13 15 0.0024 0.15 11.7 3.2 1 23 1298 1320 1298 1320 0.97

14 15 4.3e-06 0.00027 20.3 3.9 1 23 1326 1348 1326 1348 0.99

15 15 0.0015 0.093 12.3 6.3 1 23 1354 1376 1354 1377 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	63	3.4	0.1	3	23	23	43	21	43	0.94
2	15	1	65	3.4	2.7	1	19	898	916	898	921	0.75
3	15	0.003	0.19	11.4	1.9	2	23	1002	1024	1001	1024	0.96
4	15	0.0086	0.53	9.9	0.1	2	23	1037	1058	1037	1058	0.98
5	15	2.3e-05	0.0014	18.0	2.1	2	23	1061	1082	1060	1082	0.97
6	15	0.025	1.5	8.5	0.4	1	23	1088	1110	1088	1110	0.95
7	15	2.5e-05	0.0016	17.9	4.5	2	23	1117	1138	1116	1139	0.95
8	15	0.17	11	5.8	1.7	5	23	1152	1170	1151	1170	0.96
9	15	2.3e-05	0.0014	18.1	1.5	3	23	1177	1198	1176	1198	0.97
10	15	0.01	0.64	9.7	0.3	2	23	1214	1234	1213	1234	0.97
11	15	6.8e-05	0.0043	16.5	0.7	1	20	1240	1259	1240	1262	0.92
12	15	8.5e-05	0.0053	16.2	2.7	1	23	1270	1292	1270	1292	0.99
13	15	0.0024	0.15	11.7	3.2	1	23	1298	1320	1298	1320	0.97
14	15	4.3e-06	0.00027	20.3	3.9	1	23	1326	1348	1326	1348	0.99
15	15	0.0015	0.093	12.3	6.3	1	23	1354	1376	1354	1377	0.96

Sequence Information

Coding Sequence: ATGGATATCGGCATCGTTGGTAACCCTACAACGGGGGGTCCATCCAACCCAGGGGGGGCCTTGGCCTGTCCCGTTTGTACTCTTTATTTGCGTGAAGGTATTAGCCTTCAAAGACATTTGGATACACATCCCAAGGAACAGGTCATAGAGGCACTCATTAAAGCAAGCTCTCAGACGCAACAACTTCAATCTTCTATGTCAATACCTTCTGTTACTTCTAGTATACAATCACTACAGAATACACCGCAACAACacatacaacaacaacagactACTGCGCATGTATCTGCTGCACAGTCACCGTACCCCATAGGGCCTATATTTGAATGTCCACCCATTGGTACTATGATGCCTCCTCAGTTCGCTTCCTTTAGTTATCAACAATTTGTCAATAATGGGACCATGATGATACCGCAGTACGCTATGGCACCACAGACTAATCAGATGATGCAAATGTTGTATAATCCTTACGGTATGTATCAACAGCAACAGATACCTACTGTCCAAATGATCTCTCCGGTTGCAGCCATTCCTAATACCACTAGGATGAGACCTGTGGTTAGTATGTCAGGCGAAACAAATACCAGGACTACCATCACAGTACCTGTCAATAGTTCTGAACCTAAACAGATCTTACCTGAAATATTGCCAGAGTCAGAAGTAGAAAACGAACATGATCTGCCTGACATTAATTTCCCTGCATCGCCCGAAGTATCCAACAATAATACTTCCATACAACAAGAtggaaatgataataatagaattcaattagaaCATAGAACGcaacaaatacaaaataatactattcAGGATCAAAATAGCGTGCAACACGAATACAATTCCATTCCTAGATCTTTAACTATAACTTGTAACATCGAAAATGAAGACGACGAGAATGCCGAAAGCGTACTGCCTGATAtagatgaaagagaaacaacGCACATGGTTGCTTCTATCGTACAATGCAAATCTACTCATTACGAAGAACAATCAGAAACGCAAAGGTTCGATCAAGAATACAAAGACGATAGTAGTAAACTCGATGTAAATCCTCAAGGTGTATTAGAAAGTGCTTTggaaattgaagaagaaaaaatagaagaggatAAATCTTTAAccgaggaaaaggaaaaaagcgAAAATGAATCTGTCCCGTCTCAAGTTCCTGCTATAGAAACGATTAAAGATATAGTGCAACCTGAGGTTGAACAATTGGAACAgttattaatcaatattatgGAATCggaatttaataattctacaACCAAGGAGGATGATGTACagcaggaagaagaaaaaaagaaaaattcgccGATTCACACAgacgaagaaataataactCCTAATATAATAGATGTTACTCCGAGTTCtcaaaataatgatgatattGATGAATGTCATATAGAAATGGAAATAACAGAGGAACCAAAAATATGTGTAGAAGAAAAATctgacaaaaattatattttatatcattacaAGGAGAGTTTATCTGCTCCACCTTCGCCAGCAGTACGAAAGAAATCAACTAGAACGTATTCAGTACGTTCTGAATATGGGTCGAATGAATTTCTCAGTGTTTATCCTGCTGGATTTGATGCTACCACGTTGcaagatgaagaagaggaagaggaagaagataagAATGTGACAGAAGATAATTTTGATGAAGCGGATATGGAAATAGAAGCAATACCTAGTCCTCATACACCTTTTACAAAATATGGCGAAAGTTCAGATGTTGTTAGATCTCATACTCCATTGTCTGCCATTAGCGGTATATCAGTACTAAGAGTTAGAAAAGATTTAAGTAAACCTTGTTCTCCTGCATCCGTACATTCATTTTGTCATATGGATGCAGATAGTTTGAGTCACGATGAGGAAAGTAACGATTTAGGTGAAATTACGATGGAAAAGGATCCTATTAGTTGCCCTCAGATTGAAGAACAagttaaagtaaataaatacgaagAGAACGTATGTGAAAATgtggaaaagaaaggagataATTCTAATCATGTTTATCATCAATCTGTAATAACAGAACACGTTAGCCTATTTCCGCCAATTCATTCACAACAGCCTGTTTTAATACAAGATTCTTATTCGTTACctaataacaaaaatcatagtcttttaaatttatccgAATCTATTAATCCAACTACAAGCACCGAATCAAAGAATTATCATTCTAACAAATCAATTATTCAGAAACAGTCAATGGAACttcttaatattaatgaagatGCTCATGCTGGTCCAATGAACGTTTTTGAGTTTGATGGACTTCAAATTTTAGTTCCTAGTACATTTATAAGTGAATCATCACAAAAAGCAGTTAGTGCGACGAGCCAACAATCAATGGCCAGTAGCGAAGGAGGTGCAGGTATCGATGAGGAAGTCAAAAGTGTTAATATGCGAGCTGACGAGACTATGCCACCCAGAGGCGAATTATCGGAACAAGAAAGTAATGGTTGTACAGAACAATCAGCTTGGCAGGTTTATATGGGTCAAGAATCTTCAAGAATGTCAACTTCTTATGATCTAATGGCAAGAGAAAGTTGGGAAGAATCGGAAGGATCGGACAATGAAATTAGTGGTCCATTGTTAGATAGTCGATCTTTAGCAACACATTTTACATCTAGCTTATTCTTAGATCGTGATAGAAAGACGCCTACCAAAAGGACATTTAAGTGTTCACATTGCCCTGAGGTATTTGACTGTCCTAAAGAACGTAGAGTACATAGTACAATGGTGCACAAAGAATCTGGACCTAGCAGTAGTAGAGATGCAATGGAAGCACCAGAagttaaagatattaaattattagatgGTCGTATGAATGTGTTTGATGATATTTTTGTACCAGGGTTACACGTGCAACAAATATATCATCAACAACCATTATTACATCAACTTCAACCACCACAACCAGATCTAACAAAAATAGAGACAGATCAGAAAGGTGAAAACTTGACAATTCCTTCTACAGTAGAAGTAACATGTGCATTATGCAATCAACGATTTAGTAGTGAAAAAGCTTTACAATTACATCATAAGAGAATGCATATAGTTGAAGTATCCAAACGTATTCGTGAACAGGCTAAATGCGTAATATGCAACGAAGAATTTCCATCGGTTGTATTGTTTAATgctcatttaaaaatacatccGTTAGAATGCGGACAATGCGGCAAGTACTTTTATAGAAAACAGAATTATAAGTTACACATGAAACGACATTTAGGAATCAAGCCGTTCCCTTGTTCGCTATGTGATAAGGCATTTTtaactaaacaaaaattagatgAACATACCAACGGACATACAGGTAATGCCCctgttaaatgtaatttgtgtAATGAAACATTTCGTAGATATTCCAATTTAACACAGCACAAGAATAGACATCatcttaatattaaaaagaaattaaaagactACATATGTCAGTGTGGAGAGATATTCcatacgaagaaaaaattagcTTGGCATAAGGAGACGCACGACGAGAAACCTAAGGCATGCACATACTGTAATGAAAGATTTATACATATGGCTAGTTTAACTCGTCATATGCGTCGTGCTCACAATAGGAGATTTGTTCCTGATGCtcaaagagaaaacgaaaacgtCGAGTGTCcaatatgtaaatgtatttatttgagATCATCCTTAGCTGTTCATATGCGTGTCCATAACGGTGAAAAACCGTACGAATGTCAGGTATGTTCCAAGGCTTTTAGTACCAAATGGAATTTACAATTGCACAAGTGGACTCATGCAGCGCGCAGCACTAAACCATTCAAGTGCAACCAGTGTAGCGCCGCATTTTATCGACACAGTGATTATACTGCTCATATGAATTCTCATCGAAACGTACGTCCATATACGTGTAATTACTGTGGAGCTCAgttcattagaaaatataactgTTTAAGACACGTTAAAGAACACGAGGAGAACAAGGCATACACGTGTGACGTTTGCAACAAAACTTTCCATAGGTCTTATTATCTAAAAGAACATTTAAGAGTGCACTCAGGAGCAAGACCTTACACGTGTCACATTTGTGGTAAATCAAGTGGTACGAAGTCTAATCACAATAAACATGTAAGAATTCATCATGCCCGAGAACCTGTAAATACTGAAAACttcaaaaaaaaaatgactacAAAAAGGAAGCCTGAAACACAAGTACCGGCAGAGGAAAGTGATTTACTTTCAATTCGGCCACTTGGTGCTGGCCAAGAGGTTGGGAGATCATGTATTATGTTGgaatttaaaggaaaaaaaataatgttggaTTGTGGTATACATCCAGGATTATCAGGTATGGATGCTCTACCATTTGTAGATTTAGTAGAAGCAGATGAAATAGATCTATTATTAATCTCACATTTTCATTTGGACCATTGCGGTGCATTACCATGGTTTCTGCAAAAAACAAGTTTTAAGGGACGTTGTTTCATGACGCATGCAACTAAAGCGATTTATCGTTGGCTTTTATCTGACTATATCAAAGTTAGTAACATTGCTACCGAACAAATGTTGTACACCGAATCAGATTTAGAAACTAGTATGGATAAAATAGAAACTATTAATTTtcatgaagaaaaagatgtcTTTGGTATAAAGTTTTGGGCATACAATGCTGGACATGTATTAGGTGCTGCTATGTTTATGATTGAAATAGCTGgtgttaaaattttatatactgGAGATTTTAGTCGTCAAGAGGACAGGCATTTAATGGCTGCTGAAATACCAAATATTCATCCAGATGTATTGATAACTGAGTCTACCTATGGAACGCATATTcacgagaagagagaagacaGAGAAGGAAGATTTACTAATCTAGTTCACGAGATAGTCAATCGTGGTGGTAGATGTTTGATACCAGTCTTTGCATTAGGAAGAGCACAAgaacttcttcttattttggACGAATATTGGAGTCAACATCCTGAATTACATGAAATTCCAATTTATTATGCATCTTCTTTGGCCAAAAAATGTATGGCCGTTTATCAAACATACGTTAATGCAATGAACGATAAAATTAGACGACAGATTGCTATCAATAATCCTTTTGTATTCAAAcacatttctaatttaaagGGTATAGACCATTTTGAGGATATTGGACCATGCGTAGTTATGGCATCTCCGGGTATGATGCAAAGTGGTTTGTCAAGAGAATTATTTGAATCTTGGTGTACCGATGCTAAGAATGGTGTTATAATAGCTGGTTACTGCGTAGAGGGTACACTAGCTAAAACTATTTTATCTGAACCAGAAGAAATTACAACAATGTCTggacaaaaattacaattaaaaatgtcTGTAGATTACATATCATTTTCTGCTCATACCGATTATCAACAAACATCAGAATTTATACGTATTTTGAAACCACCACATGTAGTACTCGTACACGGAGAACAGAATGAAATGGGAAGATTAAAGGCTGCTCTGCAAAGAGAATATGAAGATGATCCGAACACTACTATGGAAATTCATAATCCCAGAAATACGGTTGCCGTAGAGTTATATTTCAGAGGAGAAAAGACTGCTAAAGTTATGGGCACGTTGGCGATGGAAACACCTAATCCAGGACAAAAATTATCTGGTGTTTTGGTTAaacgtaattttaattatcatatgtTAGCTCCTTGCGATTTATCGAAGTATACAGATATGAGTATGAGTCAAGTTATCCAAAGGCAAAGCGTTTATTTCTCCGCTTCGTTACCTGTATTAAAGCATCTCTTAACACAAATAGCTGGTAATTTGGAAGTTatagatgataaaaaattaagagTCTTTAAAAACATCGATGTAACCATCGATGGTAAAATTGTTATGATGGAATGGATAGCAACTCCAGTTAACGACATGTACGCTGACTCTGTTTTGACTGCAATATTGCAAGCCGAGATGATGGAACAACCTCCTAAAATGTTACCCGCGCCAACTAAAATGGATAGGATGCATTTCAAAGAATGTCTTATTGAAATGTTGCAGGAAATGTTTGGAGAAGACTCTGTTCCTAAAATTTTCAAAGGAGAAAAGTTATATGTAACCGTCGATGGTAAAAAGGCGcatatagatttattaaacttaGAAGTTACCAGCAAAGATGATGAGACTTTCCAACAAATAGTACAAACAGCTGTAATGAAATTACATCAATCGTTAGCACCACCCTGCGatacgatataa
Protein Sequence: MDIGIVGNPTTGGPSNPGGALACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSQTQQLQSSMSIPSVTSSIQSLQNTPQQHIQQQQTTAHVSAAQSPYPIGPIFECPPIGTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQTNQMMQMLYNPYGMYQQQQIPTVQMISPVAAIPNTTRMRPVVSMSGETNTRTTITVPVNSSEPKQILPEILPESEVENEHDLPDINFPASPEVSNNNTSIQQDGNDNNRIQLEHRTQQIQNNTIQDQNSVQHEYNSIPRSLTITCNIENEDDENAESVLPDIDERETTHMVASIVQCKSTHYEEQSETQRFDQEYKDDSSKLDVNPQGVLESALEIEEEKIEEDKSLTEEKEKSENESVPSQVPAIETIKDIVQPEVEQLEQLLINIMESEFNNSTTKEDDVQQEEEKKKNSPIHTDEEIITPNIIDVTPSSQNNDDIDECHIEMEITEEPKICVEEKSDKNYILYHYKESLSAPPSPAVRKKSTRTYSVRSEYGSNEFLSVYPAGFDATTLQDEEEEEEEDKNVTEDNFDEADMEIEAIPSPHTPFTKYGESSDVVRSHTPLSAISGISVLRVRKDLSKPCSPASVHSFCHMDADSLSHDEESNDLGEITMEKDPISCPQIEEQVKVNKYEENVCENVEKKGDNSNHVYHQSVITEHVSLFPPIHSQQPVLIQDSYSLPNNKNHSLLNLSESINPTTSTESKNYHSNKSIIQKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQVYMGQESSRMSTSYDLMARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCPEVFDCPKERRVHSTMVHKESGPSSSRDAMEAPEVKDIKLLDGRMNVFDDIFVPGLHVQQIYHQQPLLHQLQPPQPDLTKIETDQKGENLTIPSTVEVTCALCNQRFSSEKALQLHHKRMHIVEVSKRIREQAKCVICNEEFPSVVLFNAHLKIHPLECGQCGKYFYRKQNYKLHMKRHLGIKPFPCSLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICQCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGEKPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTENFKKKMTTKRKPETQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPNPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVIDDKKLRVFKNIDVTIDGKIVMMEWIATPVNDMYADSVLTAILQAEMMEQPPKMLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKDDETFQQIVQTAVMKLHQSLAPPCDTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -