Pcan007419.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001313835.1
- Location
- NW:402540-412311[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.35 3.3e+03 -3.2 6.7 61 141 275 363 242 378 0.50 2 2 6.9e-101 6.4e-97 322.8 7.7 1 218 853 1063 853 1063 0.92
Sequence Information
- Coding Sequence
- ATGATCGAGAAGTCGAGAGATCCTTCGGATTGCGAGATGGAGGTCGCGCGGGAAATTCTGGGAGGCCTAGTAGAAGCTACGGATCCGATTATGGAGAagcaagaaaaggaaacggaTGGGAAGAATAAAGATGGAACAATTGCAACAACAGCAACGCCATTACCCTTGCAACCACCACCCCcacaaccaacaacaacaaacgcAGTAACAACGATTTCCAGCGAATCGAGTTTTACACTTTCAGAGAAGATTGTTCCTGAATGTcttatagaagaagaaacaaataggCAGGCCAATGAAAATGTTGATTCACAAGCGAAGACGCCGAATGGCGTCTGTTCAGCTTCTTTGTCACCAGGATCGCCATCGTCGTTGCCATCTTTGTCTTCCTCGccttcgtcatcgtcgtcgtcatcgttgttaTCGAGAAAGAGGCCAGCCGGTAGCGATTTCCTGTCGATCGACTCCGATATTAAAAGAATCGGTGTCGAGATGtcggaagaagaaacgaatcaATTGAGAAACGATGTAAAGAGACTTTCGCCCGTTGAGATAAGTCTTCGCGAATGTACGCTAGGTGAGATTTCATTGACACCAGATTCTCGATCATTTAGCGAAGATGTTAACAATGATTTGTCGGAAAACTCACCATTGTCTTCTAATGTATCGCGAAGTCGACGTAGGAATCAACCAACACCGTTAAACAATTTAGTTACCGAAGCAGACGAAGATATTATGTGGACACGATCAAGGTCTAGGATCATTAAAATTGAATCTACGATTGAAAATGAGGAGGAGTGCTCTACTACGAGTAATAGCATAGAAAACACGGATAACAATGttcaaagtaaattaaattatatcgagGATAAAATGAATGGCGACGACAACGAAGACGATAAAGTCAATGAACAAACTTCCAGTTACTTGTcgaaaaacattttctctgATGAAGACATCGACCGGGCCATTGATAATTCTAATGCTGAAAGGTCCAACgttaaaaatacgataaaagagGATAAAAGTTCTCTGCGTCATTTGGTTGTCATGTTGGAACGTGTAGATAAGTCGGATTTTAAGGAATGTCAAAACAACGTTCTTGGTATTATAAAACCGAGGGAGATTCTTGGAGAAGAAGGTACAACTACGAAGGACAATGCGCACGAGAAGACGCAAAAGAGTTCTTTGTTGCCTCGTAAATTGATCGTAATGTTAAATCGTATAGACATAAAGGAAGATTCTATTaacaaggaagaagaagaaaatttgattcgtagtaatacaataaaatctattgATTCTACGGTAAATTgtcgaagaaaaaatgtaaatccGATGGATAAGATTTGTACACGTTCGTCTACCCTACAAGAGCGAATACtggaaaacaatataaaattgagCGATGAATTTGCGGATAAAAGTAAGATGATTGATGCATTGCCGAATGATTATTTTGTAGCCGAAGATCCTGTacgagagaaggaaaatagtAGTGTTGACGAGATTAAAGATTTGCAGCCAGTTATAATGGTTGAGAGTATGAAAATCAAAGTATCGGAAACGCCGAGAATACTTCCTTCTTCGACTACGCCTATTGTGGATAAATATGACAGTCAAATTTCGTTGGAGATAGGTGGATCATCTTCTAACGAAGTTAATCGTTACTCAATaagaagtaaaacaaaaactgtCGTCGAGGAGCTTGGTGAGAAGGAAGAATtgcgaattgaaaaaaatgttgcgAGGAGAGGCAGCGTGGTACAGATATCAAGTAAAGAAACAACGATTTCTCGTGGTGTGCCAGTggttataaagaaaattgaaaacgaGGTAGAAATCGTACTGGTGGCGTCTTCGTCTTTGTCAAACGAAGATGATCGTCTGCGAATTCTCGACTCGTCTGATTTGGATTCGTCCGAGACAGCGACACCAGGCTCACCCGGGGAAGCACTGGAAGCTAGTACCGATATCCAAGAGGCGATCGATACCGAAACGGAAACCGAGACTGGATCAGACAGTTCCGAGTTGCCATCGTCAATGTCGACCGTTCGTATTCGCGGTACTAGTTGCGAGAGAGAAGATATCACCGATGCAGCCAATTGTCAAGAAAACGAAAACCTCTGCTGCGACGAGATAGCATCCGAGATAATAACCAGACTTGAACCAGAAAAGCCAGAACCTTTTACCGAGGATTCCGCGGAGAGTTTGGCATTGACGACTGGTGCAAGAGACGAAGTTAGATCCGACGGTAGTGATTCTGGCCTTGGAAGTGAAATACCTGGAGATCCTGGTCCAGCCCCAGCTCCAGAAAGTGATTCGGAGACTTCCTTTCTCGATAGAATACCAGATGATATTCTCTCCGACAAGGAAAAAGcTGTTAACCAACTGGAGGAAAGTTTTGTATCAGACACGAGTGTCCCTGGGGTATCGCAGACTACATTAACGACCTTTCGAAGCCCTTCGAAAAGCAATCTCAAACGTAGACTGACCGACTGCATGGAAGAAAGTGAACCGAGTCCTAAAAGAAGCAATACTACTGAGGAgcctataaaaaagaaacgaaatattcattttgatGCCGTCACCGTTTACTACTTTCCTCGAGCGCAAGGTTTCACTTGTGTTCCTTCACAAGGCGGTAGTACTCTAGGCATGAGTGCAACCCACACGCACGCGGaaagattttctctttccgaACATGCGGCCGAGCAAAGGAGACTGCATCGGGCTAGATTGGCGCAACTACGTTCCGAACGTGCAGCTAATTGTACTACAGAGGCTGCTTCTAGTTCGGAAGATCCGAGCGACGATACCGACGAAGAACCTAGCGACAATGAAGAGCTCGATATCGACagctattattttctacagcCTGTACCAACGTGGCAAAGACGAGCACTTCTTCGAGCAGCCGGTGTACGTAGGATAGATGCCGTTGAGAAGGATGAATGTCGGGACATCCGTGCGAGCCGAGAACACTGTGGCTGCGGATGCAAGGGATATTGCGATCCGGAAAGTTGTCCTTGCAGCAGAGCAAACGTCAAGTGCCAGGTCGATCGTGCCGGTTTTCCTTGCGGTTGTACCCGGGACGGTTGTGCCAACAGCTCCGGTAGGATAGAATTTAATCCGGTAAGAGTGCGGACACATTTCATACACACATTGATGCGGCTCGAATTAGAGAAGAAGCAACGCGACGAAGAAGCAACAGATCACGAGAGCACCGACAATCAGAATAACAAAAGCGGACCATTGCGAGATATCAATTTGGTTTCTATAATAGACAATTCAAATACGGAAACGTGTATAACCGGTGGTGGTTTTACAACGTTACACTATGAAAATCATGATACCGGTAGTAGTTCAAATTGTCAAACAGAAGTATCTGGTACGCGAGAAGATAGTTTAGATCTTTATGCTATAAGAGACGATTGTTATCCTAACGAAGATACGGTTGATGGTACGCAGACTGGCCAAAGAAAATTGCATCCCGAATTTAATCAAAGTTTTCAAACGTTTTCGGGCCAAACAGCAGGTGCAAATATGAATTTTCAACAGACCGCTTATCAGGATTATCAGGCTTATACAAATATTCCTTCTACGTCTAGGGTGCAATTTCAGGCGCAATTTCAACCGGTGTCGGGAAGCCCAGGTTTTTCGCATTACGCGGTCTATGGGCAAGATGGCACATCTGTGCAGGACAGTTGTCAGATACATCCTGGACAACATCCTTCCAATTACGAGGCAAACTTCGCGCAAGACGAATCGACCGGATCGcaatatacaaatttgaatTCCGTTCAACCTATGAACGGTGGAGTCCAACAGATAGGTAAGCTAGAACCGTTCTCGGAATTGCTATCCGGTAGGTACTCGTATTATGGCGAAATAGAGCCGCAAGCGCATGGTACTTATCATGGAAATGGAAATaaggaaggagaaaagaaTCAAACGACGGATGAGCAACAATCGCAAAGTACGGAGGAATGTGACGAGAATTTTGGAGAAATCATAAAGAAATCTATGGTGGAGACTGTGTCCGCTTAG
- Protein Sequence
- MIEKSRDPSDCEMEVAREILGGLVEATDPIMEKQEKETDGKNKDGTIATTATPLPLQPPPPQPTTTNAVTTISSESSFTLSEKIVPECLIEEETNRQANENVDSQAKTPNGVCSASLSPGSPSSLPSLSSSPSSSSSSSLLSRKRPAGSDFLSIDSDIKRIGVEMSEEETNQLRNDVKRLSPVEISLRECTLGEISLTPDSRSFSEDVNNDLSENSPLSSNVSRSRRRNQPTPLNNLVTEADEDIMWTRSRSRIIKIESTIENEEECSTTSNSIENTDNNVQSKLNYIEDKMNGDDNEDDKVNEQTSSYLSKNIFSDEDIDRAIDNSNAERSNVKNTIKEDKSSLRHLVVMLERVDKSDFKECQNNVLGIIKPREILGEEGTTTKDNAHEKTQKSSLLPRKLIVMLNRIDIKEDSINKEEEENLIRSNTIKSIDSTVNCRRKNVNPMDKICTRSSTLQERILENNIKLSDEFADKSKMIDALPNDYFVAEDPVREKENSSVDEIKDLQPVIMVESMKIKVSETPRILPSSTTPIVDKYDSQISLEIGGSSSNEVNRYSIRSKTKTVVEELGEKEELRIEKNVARRGSVVQISSKETTISRGVPVVIKKIENEVEIVLVASSSLSNEDDRLRILDSSDLDSSETATPGSPGEALEASTDIQEAIDTETETETGSDSSELPSSMSTVRIRGTSCEREDITDAANCQENENLCCDEIASEIITRLEPEKPEPFTEDSAESLALTTGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLEESFVSDTSVPGVSQTTLTTFRSPSKSNLKRRLTDCMEESEPSPKRSNTTEEPIKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRLHRARLAQLRSERAANCTTEAASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQRDEEATDHESTDNQNNKSGPLRDINLVSIIDNSNTETCITGGGFTTLHYENHDTGSSSNCQTEVSGTREDSLDLYAIRDDCYPNEDTVDGTQTGQRKLHPEFNQSFQTFSGQTAGANMNFQQTAYQDYQAYTNIPSTSRVQFQAQFQPVSGSPGFSHYAVYGQDGTSVQDSCQIHPGQHPSNYEANFAQDESTGSQYTNLNSVQPMNGGVQQIGKLEPFSELLSGRYSYYGEIEPQAHGTYHGNGNKEGEKNQTTDEQQSQSTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01232991;
- 90% Identity
- iTF_01233648; iTF_01234337; iTF_01235019;
- 80% Identity
- -