Pcan000049.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- CDC5L
- Assembly
- GCA_001313835.1
- Location
- NW:51933-54414[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-17 5.4e-14 51.1 1.5 2 46 9 54 8 54 0.97 2 2 1 5.7e+02 -0.2 2.3 1 11 60 70 60 70 0.87
Sequence Information
- Coding Sequence
- atgcCGCGTRTAATGATAAAAGGTGGTGTTTGGCGTAACACAGAGGATGAGATTTTGAAAGCTGCTGTAATGAAATATGGAAAAAACCAATGGAGTCGTATAGCCTCACTATTACATAGAAAATCTGCAAAACAATGTAAAGCACGTTGGTTTGAATGGTTAGATCCGAGTATTAAGAAAACAGAATGGAGcagagaagaagatgaaaagAATCCTGAGACAAAACCTGCCAGGCCTGATCCTAAAGATATGGACGAGGATGAATTGGAAATGTTGGCCGAGGCTCGTGCAAGACTCGCGAATACTCAAGGGAAAAAAGCTAAACGAAAAGCTCGCGAAAAGCAATTAGAAGAAGCACGTAGGCTCGCAGCTTTGCAAAAGCATAGGGAACTACGCGCTGCTGGGATCACAGTGTTGCAAGAGAATAAGCGCATTCGTAAACCTAATTATAATTCTGAAATACCTTTTGAAAAACGCCCTGCTTTAGGATTTTATGATACTTCTAAGGAACAYATAGATCCACTTGCAATAGACTTTTATAAAATGAGACTACAACAATTAGATCGAGATCATAAgcaggaaaaagaagaaatggaacGTAGAAAAGATAAGCAAAAACTGAAGcagcaaaaagaaaatgatattccAATGGGAATGCTTAATAATGAAGAACCAGtgaagaaaagaagtaaactTGTTTTACCCGAACCACAGATCTCTGATCAAGAGTTACAACAAGTGATTAAACTTGGACGTGCATCAGAGGTTGCACGTGAAGTTGCTACCGAAAGTGGAATTACACTATCGGATAGTTTATTAGCTGATTATTCTCTTCCAACAAATGTTGCTGTAACTCCCAGATTTTCAGCTGCGCAAGATAAAATTCTTCAAGAAGCTCAAAATGTTATGACCCTGACACATGTTGATACTCTGTTGAAAGGAGGCTTAAACAcatcattaaataattctgATTTTTCTGGCGTTGTATCTGTAACAAATGCTATTGCAACTCCAAATACTATTCTAGCAACTCCTTTCCGTTCTCAGCGTAGCGATGGAACACCCTTGAATTCGTTTAATACACCAGCATCTTCAYGACAGCAAAATGGAGTTTTGACAACACCAATTCGTGATAAACTTAGCATTAATCCCGACGATGGTATTTCTGGATCAGAAACACCAGTGATACAGAAACAAGCTAAAGAACAATTACGTGCAGGTTTGATAGCATTGCCAACACCACGTAACGATTACGAAATAGTTGTTCCTGACGATGAAACTATAGATGAAAATACCTCTAATCCTGCAAATGGCATAGTTGAAGATCAAGCTGATATAGATGTTAGACAACAACAAGAATTGTtggaacaaaagaaaagggaattcGCTCGTAGATCACAAGTTATACAACGGAATTTGCCAAGGCCAGTTGACGTTAACATGAATATTTTAARGCCTTTCATGGATACTCCACTAACGGATATGCAACGAGCAGAAGAGYTAATTAAAAGGGAAATGATTACAATGATGCAATATGATGCGCTTCAAAATCCTATGCAACAGAATAGAAAGAGTGCTTCCAACTCTTTAGCGCAAGCACAAGCGTATCTCGAACAACAtccttatataaattttgaggAAGAGGAATTGAATGCAGCGAAAAAATTACTCACCGATGAAATGAATGTTGTTAAGGATGGTATGGCGCATGGAGATTTAAGTTTAGATGCATATACAACGGTATGGGAAGAATCTTTATCGgagatattatatttggaaACACAAAAGCGGTATACAAGAGCAACCTTAGCCTCCCAAAAAGATAGAGTAGAAGCttgtgaaagaaaattagaagaaaatcgGATGCATATGACTGGTGAAGCTAAGAAAGCTGCTAGAAtggaaaacaaattgaaaattttaacaGCAGGATAtcaaacCAGGGCACAAGtcttaattaaacaattacacGACTCGTGGGAACAAATAGGAGAAGCCCATTTGGAACTTTCgacatataaatttttacaaaatcaaGAGGAAGCAGCAGTTCCGAGGAGAGTCAATGCTCTTATTGACGATGTTAACAGACAAGCTGAACGTAATCGTATATTACAAATGCGACATGCACAATTGCAAGATAAACGTCTGCAATGTTAA
- Protein Sequence
- MPRXMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKNPETKPARPDPKDMDEDELEMLAEARARLANTQGKKAKRKAREKQLEEARRLAALQKHRELRAAGITVLQENKRIRKPNYNSEIPFEKRPALGFYDTSKEHIDPLAIDFYKMRLQQLDRDHKQEKEEMERRKDKQKLKQQKENDIPMGMLNNEEPVKKRSKLVLPEPQISDQELQQVIKLGRASEVAREVATESGITLSDSLLADYSLPTNVAVTPRFSAAQDKILQEAQNVMTLTHVDTLLKGGLNTSLNNSDFSGVVSVTNAIATPNTILATPFRSQRSDGTPLNSFNTPASSXQQNGVLTTPIRDKLSINPDDGISGSETPVIQKQAKEQLRAGLIALPTPRNDYEIVVPDDETIDENTSNPANGIVEDQADIDVRQQQELLEQKKREFARRSQVIQRNLPRPVDVNMNILXPFMDTPLTDMQRAEELIKREMITMMQYDALQNPMQQNRKSASNSLAQAQAYLEQHPYINFEEEELNAAKKLLTDEMNVVKDGMAHGDLSLDAYTTVWEESLSEILYLETQKRYTRATLASQKDRVEACERKLEENRMHMTGEAKKAARMENKLKILTAGYQTRAQVLIKQLHDSWEQIGEAHLELSTYKFLQNQEEAAVPRRVNALIDDVNRQAERNRILQMRHAQLQDKRLQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055917;
- 90% Identity
- -
- 80% Identity
- -