Pcan001975.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- -
- Assembly
- GCA_001313835.1
- Location
- NW:644544-647533[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1e-08 6.2e-06 25.3 0.4 1 38 255 294 255 301 0.91 2 5 4.7e-08 2.7e-05 23.3 0.1 2 43 310 355 309 358 0.94 3 5 1.9e-13 1.1e-10 40.5 0.0 1 46 364 410 364 410 0.94 4 5 0.082 47 3.3 0.0 14 29 410 425 409 426 0.89 5 5 3.1e-09 1.8e-06 27.0 0.7 3 43 418 458 416 460 0.92
Sequence Information
- Coding Sequence
- ATGAGTGACTCCGAAAACAGCAACATTTCGGGTGAAATACaagatttagaaaatatattagcaAATATATCGACAAAtcctatttatttgaataaatcgtCAATCGATGAAACCGATGAATTATCTCAATTCGATGTAAATCTCACCAAGCAGGAAAAACCTGGAGAAATCAAGATTGATAAACTCCAAGAAGTTTTGACTTTAAATAAAGTATTGATCGAACAATTAACAATCAAACGTAACGAAATAAGTGAGATTTTAAGAACTTGCGAAGAGAATTTATTGAAGTTAGATGAATTGATGGAAAACCATgaaaagaatcaaaaaaaacaaacgaaatggATTACGTCTATCGTTGGCATGCCTTATTTTAAAGacaaagatttctttttcgcTCCCCCTAATCAAGATGCTAAACTTAAAGCAGCACGTGGAGAACTTCAAGTAGCTACTTTCGAAAAAGGTTGCTCATGGACTTGGAAAGATAGGCGAAAAATATCAGATAATGTCTATGATGAAATTGTAATGTCCGTATTAGATCCTACAAATGCAGAGACAGAAGATTCTGAAACAGAGGATACTGACTtatctgaaaataaatttacaaaaatgttGAAAGCTAAGGACGTCAATGAAATTGTTGGCCCACCaggaaagaaacaatttgACTGGCTTAAAATTGCATTGACCAATTTCGATCAAAGACACAGTGCCGACGAGTGTTCAGTCATGTGGAATATTCTTCTACATcctgatattaataaaagcaAATGGACACACGCAGAGGAATTGAAATTGAAGACAATTGCTAAACATAATAACTGTGAAGATTGGGACAATATCGCTAAACAACTAAACACTAAACGCAGCGGATATCAATGTTTCGTTAAGTATACTTCCATGGAATATCTTCTGGATCTAACAGAGCAACCATGGACggagaaagaagatgaaaaattatGTGAAGTTGTCGCTAAATGCAAAATAGGTAATTTTGTACCTTGGGGAGATGTAGCAAGTTACATGACTTGTAGACTTAaatcaaatgtttattttcgATGGATGTTTAAGTTAGCTCCGCACTTGAAAAAGGGTAGGTTTACTCAAAAGGAATcggaaattttattgaaaggtGTTCATAAATATGGCActaatttttctctcattgCTTCACAATTATTACCTTCTAGAAGTACCACACAATTAATGGATCATTATCAAACTTTAAAAGGTATTTCTAAGTTCAATAATAATTGGACACTAATTGCTGATATGAAACTTGtcaatttatataagaaaatgggTCCTAACTGGGCAAAAATAGctaaagaatttaaatataagaatagaaCACAATTGAGACATCGATATAATGCTTTGTATAAGTATGCGAGTAGAGGTATAACGATATATGAAATACCTAGATCTCAAAATGATACTTTGTCAAAAGTAGAAGACAATGAGTTCAACGACGAAGATTATTTCATTGACGATTTTTCAAAAACTGATATTGAAGATAAAATAGATGAATTATTGATAGAGCACTTTCAGAATACAGATAACGAAAATGAATCTTCCATGGATGAAAATGACGATTATGATCCCGATGAACTTTTTCGAGACACCAAAGAATTATATTCCATTTTAGAAACTTTACAAGTAAATATGCAAATTCcagataattttgatttttttccattatctgaaaaagataaaaaattattatattccttGAAAGCGTATATAAAGTCTAAGTTTAATAAACTATGCGATAGCGAAGAAATACAAGCTTACATGTTAAAAATGTTCGGTTCACAGAAAATAGTAGAACCTAAAGAACATTTTATACCAATTCCCTTTCAAACtaacttaaatattaaaaagagtaTACAAAAGGGAGGTATAAATTAtgctttaaatttaaatgaaaaatttattttggatGTACCAATGGAATTTGATACACCTGAGTCAATAATTAATCTCATAGGTGGTTCAGAAGAACAACTacgatttgataaaattattgctTTATATTGTGTCGAAAATGATAAATTCAAACAGTGGAAGATTAATCGACCTACTAATGTATGTATTAAACCTaatcttaataaaaataataatcttcccTGTAGTTGCAAAGTCAAATCTTCTAATCCGACTGCAAATTATCAATTAGAATTGATGCAACcaaaaaatactaataataaaagtaattcttCAGGATATCAAAGTGATGTAGCGattgataaatttttcgaTGAATTTCATCTTTGGACGTCGTCTAAAAATTCTTACAAAACAGTAGTCGAGAAATTAGATGATGAGTCGGTTGTAGCAATAAAACCAAATTACAtaactttattaatttataggAATTTGTTAAAATCGAAGGTTATATCCGATATcgaaaatatacttaaaattaaCTTGGATAATGAAACTATTGGTAAAGAGTACAAGTCAGAAGATGCATATAAACTATTAAAGAAACGacttatacaattatttaaatatccgATATTAATGTCTCATTTGTCGTTAAAAGAATTGGAAACTTCACAAGAATCGTCTTCAGAAGTATTTAGCAGtgttaaatctaataaaagaaaagagatgcaacaaaatagattgaaaagaaaaaaactgaaagttaaaaaaactcatctaattaaatttattggcGACAATGAAAGTTCATCATCCTTAAGTACAGAAAAGTcttga
- Protein Sequence
- MSDSENSNISGEIQDLENILANISTNPIYLNKSSIDETDELSQFDVNLTKQEKPGEIKIDKLQEVLTLNKVLIEQLTIKRNEISEILRTCEENLLKLDELMENHEKNQKKQTKWITSIVGMPYFKDKDFFFAPPNQDAKLKAARGELQVATFEKGCSWTWKDRRKISDNVYDEIVMSVLDPTNAETEDSETEDTDLSENKFTKMLKAKDVNEIVGPPGKKQFDWLKIALTNFDQRHSADECSVMWNILLHPDINKSKWTHAEELKLKTIAKHNNCEDWDNIAKQLNTKRSGYQCFVKYTSMEYLLDLTEQPWTEKEDEKLCEVVAKCKIGNFVPWGDVASYMTCRLKSNVYFRWMFKLAPHLKKGRFTQKESEILLKGVHKYGTNFSLIASQLLPSRSTTQLMDHYQTLKGISKFNNNWTLIADMKLVNLYKKMGPNWAKIAKEFKYKNRTQLRHRYNALYKYASRGITIYEIPRSQNDTLSKVEDNEFNDEDYFIDDFSKTDIEDKIDELLIEHFQNTDNENESSMDENDDYDPDELFRDTKELYSILETLQVNMQIPDNFDFFPLSEKDKKLLYSLKAYIKSKFNKLCDSEEIQAYMLKMFGSQKIVEPKEHFIPIPFQTNLNIKKSIQKGGINYALNLNEKFILDVPMEFDTPESIINLIGGSEEQLRFDKIIALYCVENDKFKQWKINRPTNVCIKPNLNKNNNLPCSCKVKSSNPTANYQLELMQPKNTNNKSNSSGYQSDVAIDKFFDEFHLWTSSKNSYKTVVEKLDDESVVAIKPNYITLLIYRNLLKSKVISDIENILKINLDNETIGKEYKSEDAYKLLKKRLIQLFKYPILMSHLSLKELETSQESSSEVFSSVKSNKRKEMQQNRLKRKKLKVKKTHLIKFIGDNESSSSLSTEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01234274;
- 90% Identity
- iTF_01234274;
- 80% Identity
- -