Pdom046103.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- nfxl1
- Assembly
- GCA_947397865.1
- Location
- OX377621.1:34522948-34524842[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.065 1.4e+03 1.2 0.2 4 10 106 112 105 113 0.95 2 9 1e-08 0.00022 22.9 16.0 1 18 120 136 120 137 0.98 3 9 1.3 2.8e+04 -3.0 2.1 6 10 163 167 162 167 0.89 4 9 1.2e-06 0.024 16.4 13.9 1 18 173 191 173 192 0.96 5 9 0.78 1.6e+04 -2.2 0.5 6 10 217 221 216 221 0.90 6 9 7.8e-09 0.00016 23.3 12.7 1 19 227 245 227 245 0.99 7 9 2.1 4.4e+04 -3.6 1.6 15 18 260 263 260 264 0.85 8 9 0.043 9.1e+02 1.8 18.7 4 19 277 292 275 292 0.94 9 9 0.94 2e+04 -2.5 1.0 9 13 298 302 296 303 0.76
Sequence Information
- Coding Sequence
- ATGTCACACGCGAAAAACAAAAAACAACAACAAAATGTCGTTACAAATACAACGCAAAAATTCAATGAAGTCCATGCCAGGAATATAGAAGTGGCCAAAAAGATGGTGGAGAACTATGTGTCTTCGGAGTCGGAGGAAGAGGAGCTGGATGAAAAAACTATATTAGCCGATGCTATCTGGTCTTGTAAGCATTGCTATTGTTTCTTCCATTTGAATTGTATACGAAGATGGTCGAACGACAGCATGGCCCAGATAAAGGCTCAGACACAAAACGATCAGCAGCAGCAAGTGTCGAAAAGACCATGGCTAGTACCACATTCATGTGGTGAGATATGTGGCAAGGCGTTGCAACCGAATTGCGGCCATAAATGTACGCTGCTGTGTCATCCTGGGCCGTGTCCGCCTTGTGCTCAGTACGCCAATACGGCGTGTAAGTGTGGAAAGACGCCTGCCAGATCGGTACGGTGTATAGACAAACAATGGGAATGTGAAAAGAAATGTGATCGGCTATTGAAGTGTGGAGAACATCTTTGTGGCCGACTGTGCCATAAAGCCGGCCAATGTCCACCCTGCAACCAGACAAGCATGCAGTCCTGTGAATGTGGTAGAGAGAAGTCCAATCGACAATGTTATGACTTGGAATGGCACTGTAAAAACGTCTGCAATCGTAGCTATTCGTGTGGCTTACATGTATGCAAAAAAGTGTGCCATTCTGGTGACTGCGGCGAGTGCCCGTTAAGTTTGCCGCGTTCCTGTCCTTGTGGAAAAACGGTTGGCTGTGCACCATGTGGCCGTGGTTGCAATGAATCACGTCCCAAGGACTGTCTGCATCAATGTCCCAGACCCTGTCACCTGCCACCTTGTCACCCTTGCAGTGTGGCGATTAAAACTAAATGTCATTGTGGCCTAATGCCACTACGCATATTTTGTGATTGCAAACGTTTGAAATCGGAAATTTCTTGCGACAAACATCGTTCGGGCCTAACGAAATTGGAATGTGATGATAATTGTGTCGAGACCAAAAAGAATCTCGGCGTTTATGCCGGCATCTTAGCGGCAATACTATTAGCTGTTGCCTTAGCCATGTACGAAGAGCACTAG
- Protein Sequence
- MSHAKNKKQQQNVVTNTTQKFNEVHARNIEVAKKMVENYVSSESEEEELDEKTILADAIWSCKHCYCFFHLNCIRRWSNDSMAQIKAQTQNDQQQQVSKRPWLVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYANTACKCGKTPARSVRCIDKQWECEKKCDRLLKCGEHLCGRLCHKAGQCPPCNQTSMQSCECGREKSNRQCYDLEWHCKNVCNRSYSCGLHVCKKVCHSGDCGECPLSLPRSCPCGKTVGCAPCGRGCNESRPKDCLHQCPRPCHLPPCHPCSVAIKTKCHCGLMPLRIFCDCKRLKSEISCDKHRSGLTKLECDDNCVETKKNLGVYAGILAAILLAVALAMYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -