Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.047 6e+02 2.4 0.4 19 27 7 15 2 15 0.91

2 20 0.041 5.2e+02 2.6 0.0 19 27 17 25 16 25 0.91

3 20 0.041 5.2e+02 2.6 0.0 19 27 27 35 26 35 0.91

4 20 0.041 5.2e+02 2.6 0.0 19 27 37 45 36 45 0.91

5 20 0.041 5.2e+02 2.6 0.0 19 27 47 55 46 55 0.91

6 20 0.041 5.2e+02 2.6 0.0 19 27 57 65 56 65 0.91

7 20 0.041 5.2e+02 2.6 0.0 19 27 67 75 66 75 0.91

8 20 0.041 5.2e+02 2.6 0.0 19 27 77 85 76 85 0.91

9 20 0.082 1e+03 1.6 0.1 19 27 87 95 86 95 0.90

10 20 0.082 1e+03 1.6 0.1 19 27 97 105 96 105 0.90

11 20 0.072 9e+02 1.8 0.0 19 27 107 115 106 116 0.90

12 20 0.043 5.4e+02 2.5 0.3 19 27 135 143 129 143 0.91

13 20 0.041 5.2e+02 2.6 0.0 19 27 145 153 144 153 0.91

14 20 0.041 5.2e+02 2.6 0.0 19 27 155 163 154 163 0.91

15 20 0.041 5.2e+02 2.6 0.0 19 27 165 173 164 173 0.91

16 20 0.041 5.2e+02 2.6 0.0 19 27 175 183 174 183 0.91

17 20 0.041 5.2e+02 2.6 0.0 19 27 185 193 184 193 0.91

18 20 0.041 5.2e+02 2.6 0.0 19 27 195 203 194 203 0.91

19 20 0.041 5.2e+02 2.6 0.0 19 27 205 213 204 213 0.91

20 20 0.037 4.6e+02 2.7 0.0 19 27 215 223 214 224 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.047	6e+02	2.4	0.4	19	27	7	15	2	15	0.91
2	20	0.041	5.2e+02	2.6	0.0	19	27	17	25	16	25	0.91
3	20	0.041	5.2e+02	2.6	0.0	19	27	27	35	26	35	0.91
4	20	0.041	5.2e+02	2.6	0.0	19	27	37	45	36	45	0.91
5	20	0.041	5.2e+02	2.6	0.0	19	27	47	55	46	55	0.91
6	20	0.041	5.2e+02	2.6	0.0	19	27	57	65	56	65	0.91
7	20	0.041	5.2e+02	2.6	0.0	19	27	67	75	66	75	0.91
8	20	0.041	5.2e+02	2.6	0.0	19	27	77	85	76	85	0.91
9	20	0.082	1e+03	1.6	0.1	19	27	87	95	86	95	0.90
10	20	0.082	1e+03	1.6	0.1	19	27	97	105	96	105	0.90
11	20	0.072	9e+02	1.8	0.0	19	27	107	115	106	116	0.90
12	20	0.043	5.4e+02	2.5	0.3	19	27	135	143	129	143	0.91
13	20	0.041	5.2e+02	2.6	0.0	19	27	145	153	144	153	0.91
14	20	0.041	5.2e+02	2.6	0.0	19	27	155	163	154	163	0.91
15	20	0.041	5.2e+02	2.6	0.0	19	27	165	173	164	173	0.91
16	20	0.041	5.2e+02	2.6	0.0	19	27	175	183	174	183	0.91
17	20	0.041	5.2e+02	2.6	0.0	19	27	185	193	184	193	0.91
18	20	0.041	5.2e+02	2.6	0.0	19	27	195	203	194	203	0.91
19	20	0.041	5.2e+02	2.6	0.0	19	27	205	213	204	213	0.91
20	20	0.037	4.6e+02	2.7	0.0	19	27	215	223	214	224	0.91

Coding Sequence: atgaaaagttgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacacttcctatgaaaagtgtcctgacgagcacacttcctatgaaaagtgtcctgacgagcacacttcctatgaaaagtgtcctgacgagcacttttcctattttgacagaaaagtttatttgacagaaaagtgtcccgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgccctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgccctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttccttgacatttgaccagagcagtatcttatga
Protein Sequence: MKSCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHTSYEKCPDEHTSYEKCPDEHTSYEKCPDEHFSYFDRKVYLTEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSLTFDQSSIL

Sequence clustering based on sequence similarity using MMseqs2