Basic Information

Gene Symbol
-
Assembly
GCA_947397865.1
Location
OX377620.1:154298420-154299369[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.061 7.7e+02 2.0 0.4 19 27 7 15 2 15 0.91
2 28 0.053 6.7e+02 2.2 0.0 19 27 17 25 16 25 0.91
3 28 0.053 6.7e+02 2.2 0.0 19 27 27 35 26 35 0.91
4 28 0.053 6.7e+02 2.2 0.0 19 27 37 45 36 45 0.91
5 28 0.053 6.7e+02 2.2 0.0 19 27 47 55 46 55 0.91
6 28 0.053 6.7e+02 2.2 0.0 19 27 57 65 56 65 0.91
7 28 0.053 6.7e+02 2.2 0.0 19 27 67 75 66 75 0.91
8 28 0.053 6.7e+02 2.2 0.0 19 27 77 85 76 85 0.91
9 28 0.053 6.7e+02 2.2 0.0 19 27 87 95 86 95 0.91
10 28 0.053 6.7e+02 2.2 0.0 19 27 97 105 96 105 0.91
11 28 0.031 3.9e+02 3.0 0.1 19 27 107 115 106 117 0.88
12 28 0.071 8.9e+02 1.8 0.1 19 27 117 125 116 125 0.91
13 28 0.031 3.9e+02 3.0 0.1 19 27 127 135 126 137 0.88
14 28 0.071 8.9e+02 1.8 0.1 19 27 137 145 136 145 0.91
15 28 0.047 6e+02 2.4 0.0 19 27 147 155 146 156 0.91
16 28 0.043 5.4e+02 2.5 0.2 19 27 167 175 158 175 0.79
17 28 0.053 6.7e+02 2.2 0.0 19 27 177 185 176 185 0.91
18 28 0.053 6.7e+02 2.2 0.0 19 27 187 195 186 195 0.91
19 28 0.053 6.7e+02 2.2 0.0 19 27 197 205 196 205 0.91
20 28 0.053 6.7e+02 2.2 0.0 19 27 207 215 206 215 0.91
21 28 0.053 6.7e+02 2.2 0.0 19 27 217 225 216 225 0.91
22 28 0.053 6.7e+02 2.2 0.0 19 27 227 235 226 235 0.91
23 28 0.053 6.7e+02 2.2 0.0 19 27 237 245 236 245 0.91
24 28 0.053 6.7e+02 2.2 0.0 19 27 247 255 246 255 0.91
25 28 0.053 6.7e+02 2.2 0.0 19 27 257 265 256 265 0.91
26 28 0.053 6.7e+02 2.2 0.0 19 27 267 275 266 275 0.91
27 28 0.053 6.7e+02 2.2 0.0 19 27 277 285 276 285 0.91
28 28 0.053 6.7e+02 2.2 0.0 19 27 287 295 286 295 0.91

Sequence Information

Coding Sequence
atgaaaagttgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctaacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctaacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtttcctaacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgacgagcacttttcctatgaaaagtgtcctgactag
Protein Sequence
MKSCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPNEHFSYEKCPDEHFSYEKCPNEHFSYEKCPDEHFSYEKCPDEHFSYEKFPNEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPDEHFSYEKCPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-