Basic Information

Insect: Polietes domitor
Gene Symbol: -
Assembly: GCA_947397865.1
Location: OX377620.1:177304792-177307371[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.78 1.4e+02 4.9 1.5 2 23 547 569 546 569 0.87

2 8 0.00034 0.063 15.5 3.8 1 23 602 625 602 625 0.98

3 8 1e-05 0.0019 20.3 5.8 1 21 633 653 633 654 0.97

4 8 0.00026 0.048 15.9 3.7 1 23 671 694 671 694 0.97

5 8 2.3e-06 0.00042 22.3 1.2 2 23 700 721 699 721 0.97

6 8 0.0024 0.45 12.8 1.8 1 23 727 750 727 750 0.97

7 8 0.024 4.4 9.7 0.4 1 23 771 793 771 793 0.97

8 8 4.6e-05 0.0085 18.2 0.6 1 23 799 822 799 822 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.78	1.4e+02	4.9	1.5	2	23	547	569	546	569	0.87
2	8	0.00034	0.063	15.5	3.8	1	23	602	625	602	625	0.98
3	8	1e-05	0.0019	20.3	5.8	1	21	633	653	633	654	0.97
4	8	0.00026	0.048	15.9	3.7	1	23	671	694	671	694	0.97
5	8	2.3e-06	0.00042	22.3	1.2	2	23	700	721	699	721	0.97
6	8	0.0024	0.45	12.8	1.8	1	23	727	750	727	750	0.97
7	8	0.024	4.4	9.7	0.4	1	23	771	793	771	793	0.97
8	8	4.6e-05	0.0085	18.2	0.6	1	23	799	822	799	822	0.97

Sequence Information

Coding Sequence: ATGTTTCAATCAACCTCCACCTGTCGATTGTGTTTAAATATTGGCCACGACCTTCGTGGGCTCTATGACAAAGATGGCCACAGGAATGAGGTCTATGCACTGACGGAAAAATATTTTACTCCAATGTTGCTTAACTTAGAAGACGACAGACATCTTGCGGCCATATGTGTGGAATGCTGGCGACATATCTTTGAATTTCATACTTTCCAGCAGACTATACATTTGGCGCACAGAAGTCTTAGCAATCGAGCTGAATTCGATGGTGTATCTGAAAGAGTTTCTCCGGGATCAGAGGTGACTGAGGTAGAGGATCCAAATAAAGTCTGCCTCGGAGTCTCCAGTGCTTTGAATGTATATCATGATCGTGGTACGGATTCCTGCGATGCTGAGGATGAAAAAGGAGAAGCTGTTTCTCCGATTAATGATATCTCTCCAAGGTTACCAAAAATAATTGCTTTTAGAAGTCATGGAGAGTTGGAATCGCAAATTGATGGAAACGACTCTTGTAATGCAGGAGAAACCGAATTCCCTATGGCTCATTCTGAAGCTATCTCCGTCTGGGATGTTTTTATTGAGAGTGAACTAGAAGCCGAAGTTCCAATAGTACCTGTTGAACCAGTTCCGCTGGCAACCACAGAGATTCCTAGTAACTTCCCAAAACCAATAGAGCTTGAGGTTAAGTGCCCTAAGAAAAAATATGAGACAGAAAGCGCAGAATTCGACAACGCTTCGGACATTGATATTGGGAACCAACAATCTCCAACAATTTTAAAATCAGAAGCAGAAGAACCTGTGATCAACGTTGAGCAACACTATGGACCCATAGCAAATGTAACAGTTGAAGAGTCTGAAACAAAGTCGCCTATTATTGAAGACTTGCCAGATCGGGGCAACGAATCAAAGGAATCCAGCGATCCAGACGAAGAATGCGAGGAGTACAATGAACCAGTTGGAGTTTTAGCCGGTGGAGAGTTCGATAGGCCGACCAGAGAAAACGAACAATCCGAAACCGAAGAAACAGAATCGGTTACCGGCTCAGAATGGTCTTTAGTCGATGAAGAGCCTCTGGCGGCACAAACTAGGCGACGCAAAACTGCTCCCAAGAAGCAGGTAACCAAGAAGGCAACTTCGGAAACTAGCAACGCAAAAGGCAAAAAAAAGAAAAGAAATTCGCATGCAAAAGACTCAAAACGACACAAAACCGCCCAGCACGGCGATGGATCGGAGTCGGATGAGTTCGGGGGAACTTTCAGTTCAGATGACGAAAGGCCACTGGCAGAATGTGTGGCCAAAACGAAAGGACCCAATACCGAAAAGAACACCGGGGACAAATCGATGGATAGGGAAACCATTGAGGAAAATTTGCCAAGCCCATCTAAACCTCTAGACAGACCGGGCAATTCTAAAAGAGTCCACAAAACAGCCCTGGAATTCGATGTGTCCGCATCAGAAGAGGGCGACTACAGTTCAGACGAGGATGCCTCTGCCACGAAATCTAGTGGCGATGATGGAAACTCCCAAACTAAATCTACTGCCAAATATAAGAAACGAACGAAATTCAGCTACAAAACCAGCTTGAAACGACAAAAAACTGTCGAGGAATTCGATGACTTTATAGCCCAGTGGAGACCAAATTTAGAGTGCGTGGCCTGCCGCGAGACATGCTCCAGCTTTTCGTCGTTGCAGCAACACTTCGCCCAGCAGCACCCGCACGAAGAGTGCCACATAATGTGCTGCCAGCACAAGTTCTATCACCGATATGAAATCGAAAAGCACATCCACTACCACAACGAACCGCATGCCTTCAAGTGTGAGGTGTGTTTCAAATGTTTTACCCAGGGCGAAGCTTTGCGGGATCACTTTAGGACAAAACATGGCGGAGCACAGCGTGAATCATTCAAGTGTCCCCAATGTGATAGGTGCTATTCACACAGTAAATCGCTGAAGAAGCACATGCGATATGCCTGCAACGGGGACAAGAACCTCACGGCGGAGCAGGCTGCAAAGGGCCACGTCTGCGGCGAATGCGGCAAGGCATACAAACATTTAAAAAGTTTTCGTTTACATCAAAAGCGTGTCCATTTGAAGAGCGTGTCCAAATGTACCATTTGCGATAAGATTTTCTACTCTCAGCGTGACTTACAGCAACACATGAACAATCACCTAGGCAAGCTTACGCACACTTGTCCATTTTGTCCCAAGATGTATGCAACCAATCGTCCCTTTTACGATCATCTGAGAAGAATGCACCCCAAGGAATGGGAAGAGAAAAAGAAAGAGAAGGCTGAACGCAGTAAAGAGAAGAAGATCTACAAGTGCGACACCTGTGCGAAAGAGTACCAGACTCAGTTGGCTTTGAACGAACACAAGGCCAGCCATGCCGGAAAGGTTATGTACTCGTGTAAACTATGCCCAAAGACATACAAGTACAGTTCCAATGTGGCGGTTCATGTCAAGAGGGTGCATTCCAAAGAACAGCAGGCGAAGAAGAACAAGAATAAAGATTGA
Protein Sequence: MFQSTSTCRLCLNIGHDLRGLYDKDGHRNEVYALTEKYFTPMLLNLEDDRHLAAICVECWRHIFEFHTFQQTIHLAHRSLSNRAEFDGVSERVSPGSEVTEVEDPNKVCLGVSSALNVYHDRGTDSCDAEDEKGEAVSPINDISPRLPKIIAFRSHGELESQIDGNDSCNAGETEFPMAHSEAISVWDVFIESELEAEVPIVPVEPVPLATTEIPSNFPKPIELEVKCPKKKYETESAEFDNASDIDIGNQQSPTILKSEAEEPVINVEQHYGPIANVTVEESETKSPIIEDLPDRGNESKESSDPDEECEEYNEPVGVLAGGEFDRPTRENEQSETEETESVTGSEWSLVDEEPLAAQTRRRKTAPKKQVTKKATSETSNAKGKKKKRNSHAKDSKRHKTAQHGDGSESDEFGGTFSSDDERPLAECVAKTKGPNTEKNTGDKSMDRETIEENLPSPSKPLDRPGNSKRVHKTALEFDVSASEEGDYSSDEDASATKSSGDDGNSQTKSTAKYKKRTKFSYKTSLKRQKTVEEFDDFIAQWRPNLECVACRETCSSFSSLQQHFAQQHPHEECHIMCCQHKFYHRYEIEKHIHYHNEPHAFKCEVCFKCFTQGEALRDHFRTKHGGAQRESFKCPQCDRCYSHSKSLKKHMRYACNGDKNLTAEQAAKGHVCGECGKAYKHLKSFRLHQKRVHLKSVSKCTICDKIFYSQRDLQQHMNNHLGKLTHTCPFCPKMYATNRPFYDHLRRMHPKEWEEKKKEKAERSKEKKIYKCDTCAKEYQTQLALNEHKASHAGKVMYSCKLCPKTYKYSSNVAVHVKRVHSKEQQAKKNKNKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -