Pdom028454.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- Son_1
- Assembly
- GCA_947397865.1
- Location
- OX377618.1:18547061-18561378[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 8 1.5e+03 1.7 2.4 1 23 1282 1312 1282 1312 0.85 2 11 0.021 4 9.8 0.2 1 23 1318 1341 1318 1341 0.95 3 11 0.00016 0.03 16.5 2.6 1 23 1346 1369 1346 1369 0.95 4 11 0.00051 0.093 15.0 3.6 1 23 1374 1396 1374 1396 0.97 5 11 0.16 30 7.1 5.2 2 23 1403 1424 1402 1424 0.95 6 11 0.01 1.9 10.8 3.0 2 23 1432 1454 1432 1454 0.95 7 11 0.06 11 8.4 1.4 1 23 1460 1483 1460 1483 0.95 8 11 0.87 1.6e+02 4.8 2.1 2 23 1494 1516 1493 1516 0.93 9 11 6e-07 0.00011 24.1 0.7 1 23 1544 1566 1544 1566 0.98 10 11 6.5e-06 0.0012 20.9 1.8 1 23 1573 1595 1573 1595 0.96 11 11 0.00053 0.098 14.9 0.2 3 23 1603 1623 1602 1623 0.97
Sequence Information
- Coding Sequence
- ATGGCACTGGAACCCCCGGCTCCAACGATAATGACGAAATCGTCAGAAAGCGCCGTCCAACTTGTGAAAATTAAGGAAGAAAAAATTGATCTTGAGATTGAACATAAAATAAAAGAACTTAAAGCCAATAAGAAACATCTAGTTAATGACCAACAAGACCAAGTGAAGAAAGCAGAAGACAATGGAGAAGAGTGTCAGAGTGAAGATGATGATGAAGACTCGTCGCAAAGCTCGCAAGAGGATGAGCCCGAGGAAGAAAAAAAGAACATAGAGCCAGTTAAAAGTTCCAACGAAATTTTAGCCGAACTCTTTAAGGTCTTCAATGCGGCGCCACCAGAAGAGTTAATGGACGATAAAAATCTAATTGAAAAATCCCTAAAAAGGAAAAAAGAAAAGAAAAAGAAACATAGAAAGAATAAGACTAATGGGGAACATACAGATACAGATGGAGAAGCTAATGGAGAGGGTTCCACAAGTAAGCATAAAAAGAAGAAGAAACATAAACATAAACACAAAGATGAGGATAAATCTAAGAGAAATAGCAAAGATGCCAAGGAAAAGGATAGATCGAAGGACAAGGCAAAGTCCAGAGAGAAAAAGAAAAATAAGGATAAAGATAAAAGTCCGGCTGTAGACAAAGACACATCTAAACAAACGAACAGTAGTGATGACAAGCACAGCAATAGGAAGGACTCATCAGGCAATAGAAAACATGATTCCGCACCCCACAGGTCTGATCATAAACGGCACTACGAGAAGGATTCGTCTGAAAATAGCAAGCGCCGAAAATTTGAAGATAAGGAGCCAAATTCATTTTACAGCGGCCAGCGAGACAAAGACCATCGGAAAGTTCATAGTAGCACAGCAGATACATTTCGCGAAGTGGGAAAAGAAAGTGAAATTAAAATAAAAAAAGAAGTTTTTGAGAAGACCAGCTCTCGAAAAGTATCCGATGGAGAAATTTCAGAGATCTCGCTATCCGATGAAGAAGTTTACCTTGAAAGAAGGGAAAAGGAGATGGATTTCAGGAAATATAAAGGCACCAATAGTTTTTATGCTGGTTCAAACCGCAGCCGTAGCAGAGAGACTGATCGAAACTATAACAATGATCGCTTCCGTAGTCATGACGGAGACCGAGACCGGGATCGAGATAGTTATCATAATCGCAATAGGGGGGAAAGTGGAAGAAACTATTATTCTCGTCGTTCAAAATCTCGTTCAAGATCACGAGATTTGGGCATAGATAAAAAACGTCTCTTGGAAATCGCGCGCAAAAATGCCATAAGTATGTTTAAACGTGGTAATTTGCCCGGTTGCGATAACATGACCGAAGACGTTAAAGACAAGGTTTTGCTCAAAATGCGTTACGGCGGTCGCACAGTGGAAGACCTAACTGAATTTTGCAAGAAAATTTCAAATGGCGAACATCTTTCGGACTTAAGTTCTGACGAAGGCTCTGACGTCGACAAAGGTGGCAATGCTAAAGCATTCCATCACCCTTTTCAGCTGAAAGAACGTGAACCTATTGTTATGCATATACGTAATTCCAAACCCATATTACCCGCCGCCAAAACTGAGGAACAAACGAAAACGATTACAATGCAATTTCCAGTTTCTTCCGGACAGCAACATCGCATGACCGAAGCATGGGTACCTGTAGAGCCTAAAGATAAACTACCACCTCTACCGGCATTGCCATCGGCAACACAATCTACGTCTATATTTAAAAGTACCGTAACAAAGAATGCCCTTGGTAAGCCTCTGCCTACAGAAAGTGAACAGGAACCAGCTTTTAAGCCCGTTGATGACCCAATTTCTGCTGCGACGAAATCTACTCTAGAGACTGTAGAGACCCCTCCACAAGATTTTGCACTTACAGCAGTTCCGCCGCCATCATTACCACCTTTCCTTTATACTCCAGTGGGAGTTCCACCCCCAACGCCCGTTGGAGTTCCACCACCAACAATTAGAGTACCACCACCGGCCACACAAACTGTCCCAAACAACTTTACACCCGATGTCCCAGTACCTTCTAGCGGAGCCTCAATATTTCCTGAAGCCCCAATACATCCAATGGATGTGTCTTCTATCATTTCTAAACGACTTAACGCCATGAGAAGATTACAGGAAAATCCCATGGATTCGGAAGCTATAAAAATGATGTACAATTCACAAAAGGAAATGACGACGTGGGCTGCTTCCAAACATCTGCCCGGCCAATTTACTGGCAGTACCGGCGTCAATGTGCTCAAACCAAGCCAGCTGAATTCCGGACCACAAGTATGGGCAAGGCGTGATCAATTGACGTCATCGAAACCAGTGTCTGGCGGCATGGGCATGCATTTGTTACAAAAAATGGGCTGGAAACCGGGTGAAGGTCTGGGCAGGGAAAAGAACGGATCCCTGCAACCCTTACTACTTGACGTCAAGTTGGATAAGCGTGGTCTTGTAGCGCAGGAGGATCTTAAACCCGCCAAACAGCCAAAACGTGGTGGCGGTGGCGGCGGCGGAGCGCCATCGCAGCCTCAACAAAATCCCCAAGACAAGCATCCAGTTTGTTTGCTCAATGAAATCACAACAAAATATAAATGGACACCACCAATGTATACTCTTGTCCATGAAAATGGGCCATCACACAGTCGAATGTTTTTATTCTCAGTCAATGTTAATAATGAAACATATACGCCATCGAAATTGTGTAATACAAAGAAAGAAGCAAAGTTTCAAGCAGCCAAACTTTGTCTACAAAAACTTGGCATATTACCACCACCAGGGCCCAGCATGAACGAACAACAACAACAGCAGCGACGACGACAAAAACACTTAAGTTTAGAAGTTGAACCAGAAAAAACAGAAACACAGCAAAAAACCCACAAACCCATAGAAAACGGTTTTAAGTTGGTCGGTCAGTTAGCCAAGGAGAGGAGCCATAACGATTTTGTATGTATCAACAACCACAACCTCAACATTCTCATCATCATCATGGAAACATGTCGCACTTGTGCCAAGTGTGACTTTGATGATAACCATCAGACCCAATGGCTGGACTTATTCAATGCGCCACATTGGAAACCCGAAACGGAACGTATACATATTGAGTTGAATACGTGGAAAATCAAGATATCCTGCAATGATGGCTTGCCGCAGAAAATTTGCACCGATTGCTTTTCGAAATTTTGCACGGTGTCTGAATTTCGCCTGCAATGCTTGGAAGCCCAACAAATTTTAAGTAATATATTCGATAAAATCGATACACAAAGCCTACAAGACGATGATGAAGTATTCGAGGGGTTCGAGCAGTCCTCTGAACAGGATAATGATTTAACAAACGTAGTAGCAGCAACATCCTCCCTAAGTGTTACAACTAGTGCAGCTGCTGCTACTCCACCAAAGCCAATTGAGAATAATTTACTCAAGAGTAATAGTAAAAATGATAATACCGCAACAACAACAGCATCTCTTAGTAATATTTTAACTATAAACGATCCCAACAACACCGAGGTTTCATTTAGAACCATACCAACTAATATAACAACAACAGACACTGCCGTTTTAGAAAACGATAACGATAAACAAAATTATTGCCAGGACAATTTTATAGACGATAATACTTCCATAACGAATAACGAAATACTACCAGAAGATACCAACGATTTAGATGAGAACGATCTCATAGAAGAACTTATAGAAGAATTAGATATCATCGAAGAAGACGAAAATAATGACCAAGATCAAAATCAAAACAATATCTATCCAAACGAAACTCACTTCCAAACGCCAGCTGACAACGAAGACGAAAACGAGGACGAGGACGATTGTCTGGCCGACAACTTGAATATAACGTTTGAATGCAAATACTGTTACAAATGGAAGAACAGTGTCAGCGAAAACTTTCAAACTCAGCATCAACTACTGGCCCACATTACCGAATTTCACAGCTCGGAACAACCGTACAATTGCCCGTATTGCAGGGAAAACTTTATGGACGCTGCCTCGCGGACCACACACCTAAAGGAGGCCCATAGTCAAAAGATGCATTCTTGTGATACATGTGGCAAAAAGTATGCGGACAAATTCAATTTGAGAAATCACGTGGAAAAATATCACAGCGGTGCCGATTTCGATTGTACACTATGTGCGAAAAGTTTTTGTTCCAGTAAAAGTTTGAATTACCACATGAAATGGCATAACCCCAAGGAACAGTTGAAGTGTAGCTACTGTGATCGCCTATTCATCAATCAGAGGCATTTGAAATGTCACGAAGAGACACACACGGGATATCGAAGTCAAGAAGTATGCTCCTTTTGTGGTAAATATTTCTTCCATTTAAAAACTTTAAGATGGCATATTTTTCGTCAACATGGTGGTATGGCACCTTACAAATGTGCCAGATGCACCGAAGTTTTTACATCGTATTTTGAGAAACGGCTTCACATGCTCGAATATCATTTGGATAATTTGACGCCGATTGAAAAAACCGAATGTATGTTATGTCACAAAAGATATGAAAATGAGCACATCCTAAAGGACCACATGCTCGAGGACCACAAGGAAAATAAAGGAGGTGTGAAGATAGCGAATAATAAGCGCATTATTATGAATAAGAAACCGAAAAGTTTTACGGGTTTGTTTCAATGTGAAAAGTGTGATAAACGTTTCAATATGAAATCAGCATTAGAAAGACATATGGCTGTGCACTCAACGGAAGGAAGGCCTCATGCTTGTCCTGAATGTCCTAAACGCTTTAAAAGATCTCAAGATATGAAATGGCATTTGAAAACGCATTCCTCAGAAAAACCTAATATATGTGATGTTTGTGGCAAAGGATTTGCCTTAAAATACGTGTTGACCCAGCACCGGCGAAGTCATGAAGGGCATATGAAGAAAATGCACGACGAAGATGAAGTGGCTGCTACCCATGTAAATTCCCCTAACATTAACGCAGAGCTGCCATTGGATGACTTGGTAAACATTGTGATTACTTAG
- Protein Sequence
- MALEPPAPTIMTKSSESAVQLVKIKEEKIDLEIEHKIKELKANKKHLVNDQQDQVKKAEDNGEECQSEDDDEDSSQSSQEDEPEEEKKNIEPVKSSNEILAELFKVFNAAPPEELMDDKNLIEKSLKRKKEKKKKHRKNKTNGEHTDTDGEANGEGSTSKHKKKKKHKHKHKDEDKSKRNSKDAKEKDRSKDKAKSREKKKNKDKDKSPAVDKDTSKQTNSSDDKHSNRKDSSGNRKHDSAPHRSDHKRHYEKDSSENSKRRKFEDKEPNSFYSGQRDKDHRKVHSSTADTFREVGKESEIKIKKEVFEKTSSRKVSDGEISEISLSDEEVYLERREKEMDFRKYKGTNSFYAGSNRSRSRETDRNYNNDRFRSHDGDRDRDRDSYHNRNRGESGRNYYSRRSKSRSRSRDLGIDKKRLLEIARKNAISMFKRGNLPGCDNMTEDVKDKVLLKMRYGGRTVEDLTEFCKKISNGEHLSDLSSDEGSDVDKGGNAKAFHHPFQLKEREPIVMHIRNSKPILPAAKTEEQTKTITMQFPVSSGQQHRMTEAWVPVEPKDKLPPLPALPSATQSTSIFKSTVTKNALGKPLPTESEQEPAFKPVDDPISAATKSTLETVETPPQDFALTAVPPPSLPPFLYTPVGVPPPTPVGVPPPTIRVPPPATQTVPNNFTPDVPVPSSGASIFPEAPIHPMDVSSIISKRLNAMRRLQENPMDSEAIKMMYNSQKEMTTWAASKHLPGQFTGSTGVNVLKPSQLNSGPQVWARRDQLTSSKPVSGGMGMHLLQKMGWKPGEGLGREKNGSLQPLLLDVKLDKRGLVAQEDLKPAKQPKRGGGGGGGAPSQPQQNPQDKHPVCLLNEITTKYKWTPPMYTLVHENGPSHSRMFLFSVNVNNETYTPSKLCNTKKEAKFQAAKLCLQKLGILPPPGPSMNEQQQQQRRRQKHLSLEVEPEKTETQQKTHKPIENGFKLVGQLAKERSHNDFVCINNHNLNILIIIMETCRTCAKCDFDDNHQTQWLDLFNAPHWKPETERIHIELNTWKIKISCNDGLPQKICTDCFSKFCTVSEFRLQCLEAQQILSNIFDKIDTQSLQDDDEVFEGFEQSSEQDNDLTNVVAATSSLSVTTSAAAATPPKPIENNLLKSNSKNDNTATTTASLSNILTINDPNNTEVSFRTIPTNITTTDTAVLENDNDKQNYCQDNFIDDNTSITNNEILPEDTNDLDENDLIEELIEELDIIEEDENNDQDQNQNNIYPNETHFQTPADNEDENEDEDDCLADNLNITFECKYCYKWKNSVSENFQTQHQLLAHITEFHSSEQPYNCPYCRENFMDAASRTTHLKEAHSQKMHSCDTCGKKYADKFNLRNHVEKYHSGADFDCTLCAKSFCSSKSLNYHMKWHNPKEQLKCSYCDRLFINQRHLKCHEETHTGYRSQEVCSFCGKYFFHLKTLRWHIFRQHGGMAPYKCARCTEVFTSYFEKRLHMLEYHLDNLTPIEKTECMLCHKRYENEHILKDHMLEDHKENKGGVKIANNKRIIMNKKPKSFTGLFQCEKCDKRFNMKSALERHMAVHSTEGRPHACPECPKRFKRSQDMKWHLKTHSSEKPNICDVCGKGFALKYVLTQHRRSHEGHMKKMHDEDEVAATHVNSPNINAELPLDDLVNIVIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -