Basic Information

Insect: Polietes domitor
Gene Symbol: grau
Assembly: GCA_947397865.1
Location: OX377619.1:13491973-13494293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.57 1e+02 5.4 0.1 2 23 277 299 276 299 0.94

2 10 0.21 38 6.7 6.7 6 23 309 326 309 326 0.99

3 10 9.2e-05 0.017 17.3 1.6 1 23 332 355 332 355 0.90

4 10 7.5e-05 0.014 17.6 2.0 1 23 363 386 363 386 0.92

5 10 0.014 2.7 10.4 0.5 2 19 392 409 391 412 0.93

6 10 0.14 25 7.3 0.0 3 23 420 440 419 440 0.96

7 10 7.7 1.4e+03 1.8 5.2 2 23 449 470 448 470 0.87

8 10 0.0032 0.58 12.4 0.4 1 23 477 500 477 500 0.95

9 10 5e-07 9.1e-05 24.4 2.0 1 23 506 528 506 528 0.98

10 10 1.7e-05 0.0032 19.6 4.0 1 23 534 557 534 557 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.57	1e+02	5.4	0.1	2	23	277	299	276	299	0.94
2	10	0.21	38	6.7	6.7	6	23	309	326	309	326	0.99
3	10	9.2e-05	0.017	17.3	1.6	1	23	332	355	332	355	0.90
4	10	7.5e-05	0.014	17.6	2.0	1	23	363	386	363	386	0.92
5	10	0.014	2.7	10.4	0.5	2	19	392	409	391	412	0.93
6	10	0.14	25	7.3	0.0	3	23	420	440	419	440	0.96
7	10	7.7	1.4e+03	1.8	5.2	2	23	449	470	448	470	0.87
8	10	0.0032	0.58	12.4	0.4	1	23	477	500	477	500	0.95
9	10	5e-07	9.1e-05	24.4	2.0	1	23	506	528	506	528	0.98
10	10	1.7e-05	0.0032	19.6	4.0	1	23	534	557	534	557	0.97

Sequence Information

Coding Sequence: ATGGTATGCTGTTTATGTTTAAAAGATTCGGAAAATACCACCCAAATTTTCGAGGATAATGAGACCCAAGGAAATAACAACATTGCTAGAGTTGTGGCCAAACATTTTTGGTTCGAGCCTCTCAAAGATGATCCAGTTTATGCGGCAATTTGTACGATATGTTGGTCTAAACTTTCTGATTTTCACGAATTCTATGAAATGGTGGAGGTGGTCCATCAACGATACCACGGGCCAGATGCAGTCACAGTAAAAACAGAAACGACTGTGTTCGATTGCAGCACTCTGCCAAGCAAACCTGAGCCTAATGACGATTTTGTTGATTTGGGAGAGGTGCCCATTTCAACCGAACTAGTGACCATAAACAATCCCGTCTCCAAGGAAGCATATCCCAATTTCGATAATAATGCAAATAATGATGGAGGCGACGACTCCTGTGATATGGACGATTTTCATGTATTTCAAGATGAATCAGAACCTTCGGATCCATTTGACGACACTGAAGCAGTAACCACGAATGAAAGCCCAGTTAAAGAAGAATCTCTGGACTCATCAACTACGCTTAACAAAGAAACAAGACTGTCTACTATTTCCCGAAAATCACAAAGAAATATAAAGAGTAAAGAAGATACGTTAATACAAACAAAAACTCCTACTAAAAGGGGCAGAAAGCGTAAAGATGAATCCGCGGCGAATGCTTCCAAAACTGAAGTTAAACAACCTAAGAAAGAAAGGGGTAAAACTAAAGCAAATAAAAAACCAGAGGAAGAAAGTGCTTACAAAATAAAAATGAAGTCATTTGATAAGGAAATCAGTCAATACATGGGACTTCATTGTGATGTGTGTAATATAGCAGCTGAAGATTTTGCAGGAATAAAAAGTCATATGCGTAGTGAGCATAATATAGACAATGGTTATGTGAAATGTTGTGATAAGAAATTTCACAAAAGAGCAAATCTACTGCACCATATTCGTCATCACGTGGATCCCAATTGTTATAGGTGTGAAGAATGTGACCAAACGTTCTCCGATTACCAATCACTTCGTAATCACAATTTTATAAAGCATCAGAAAGAAGAGGATAAAATATATGAATGTACAGAATGCCCGAAAAAGTTCGCCAAAAAATATCTCCTGGAACAACATAGAACGTTTAAACACAAAGATCGTTTCAAACAGTGTAAAACGTGTAACAGAAGGTATAAAACGATAGAGGAGTTGGAAGAGCATAATAAGGAACCCTGTGTTGGAGGTAGAATGTGTGATATTTGTGCTAAAGTTATATTCGGTCCAAGTGCATTTATGCGTCATCAACTAGAACACCAAGACGGTGATGCGCATAAAGTCCAGTGTGATATGTGTGGTTCGTGGCACAAAGATAAATACGCACTAAGAAAACATAAGCGGCGACATATGCAACCAAAAACACCCCATGTCTGTGATATATGTAATAAAGTGTCACCAAGTCGGGATGCGATGGAAAGCCATAAAAAGTATGCCCACCGTTCTGATCGAACATTTGAGTGTGAATTTTGCCAGAAATCTTTCAAACGACCGAGATCACTAAGAgaacacatgagcactcatactggtttatttttgtacacgtgtccgcattgtccaaaaacgtttaattcaaatgctaatatgcattcgcatcgcaaaaacgttcatcctgtggaatttgaagaAGCCCGCAAGCGGCGACAGCGAGTAGGTTATTTGGGCGGCGACCAACAGGCAATGCCCGAAGTAACGAAATTAAGTGCCGCTAAAACAGATAACGACAATGAGGCATCAAATCCGTCACAGATGAAGACTAATGATACTATAATGCTATATAATATGAATTGA
Protein Sequence: MVCCLCLKDSENTTQIFEDNETQGNNNIARVVAKHFWFEPLKDDPVYAAICTICWSKLSDFHEFYEMVEVVHQRYHGPDAVTVKTETTVFDCSTLPSKPEPNDDFVDLGEVPISTELVTINNPVSKEAYPNFDNNANNDGGDDSCDMDDFHVFQDESEPSDPFDDTEAVTTNESPVKEESLDSSTTLNKETRLSTISRKSQRNIKSKEDTLIQTKTPTKRGRKRKDESAANASKTEVKQPKKERGKTKANKKPEEESAYKIKMKSFDKEISQYMGLHCDVCNIAAEDFAGIKSHMRSEHNIDNGYVKCCDKKFHKRANLLHHIRHHVDPNCYRCEECDQTFSDYQSLRNHNFIKHQKEEDKIYECTECPKKFAKKYLLEQHRTFKHKDRFKQCKTCNRRYKTIEELEEHNKEPCVGGRMCDICAKVIFGPSAFMRHQLEHQDGDAHKVQCDMCGSWHKDKYALRKHKRRHMQPKTPHVCDICNKVSPSRDAMESHKKYAHRSDRTFECEFCQKSFKRPRSLREHMSTHTGLFLYTCPHCPKTFNSNANMHSHRKNVHPVEFEEARKRRQRVGYLGGDQQAMPEVTKLSAAKTDNDNEASNPSQMKTNDTIMLYNMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -