Pdom062387.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- hang
- Assembly
- GCA_947397865.1
- Location
- OX377620.1:127590022-127603498[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.16 30 7.0 0.9 3 23 433 454 432 454 0.92 2 18 0.47 86 5.6 3.8 3 22 558 577 556 577 0.90 3 18 0.016 3 10.2 1.0 1 23 652 675 652 675 0.91 4 18 0.0016 0.29 13.4 0.2 3 23 803 824 802 824 0.96 5 18 4.2e-05 0.0078 18.3 0.1 1 23 832 855 832 855 0.96 6 18 6.8e-05 0.013 17.7 0.0 2 23 945 966 945 966 0.98 7 18 0.0013 0.24 13.6 2.7 2 23 1014 1036 1013 1036 0.95 8 18 0.0054 0.99 11.7 0.2 2 23 1045 1067 1044 1067 0.95 9 18 0.0037 0.68 12.2 0.1 1 23 1080 1103 1080 1103 0.95 10 18 0.00017 0.031 16.5 1.1 1 23 1163 1185 1163 1185 0.99 11 18 0.0026 0.47 12.7 0.9 1 23 1193 1216 1193 1216 0.96 12 18 7.4 1.4e+03 1.8 0.3 5 20 1227 1242 1224 1242 0.89 13 18 6.6e-05 0.012 17.7 0.1 3 23 1306 1326 1305 1326 0.98 14 18 0.00072 0.13 14.5 1.1 1 23 1361 1383 1361 1383 0.97 15 18 0.00049 0.09 15.0 0.9 2 23 1475 1497 1474 1497 0.91 16 18 1.7 3.1e+02 3.9 0.2 3 19 1518 1534 1517 1536 0.92 17 18 0.14 25 7.3 0.9 3 23 1552 1572 1552 1572 0.97 18 18 0.0042 0.77 12.1 0.6 1 23 1806 1828 1806 1828 0.98
Sequence Information
- Coding Sequence
- ATGGATTTTGATTCTGGATGGATTTTGCCATCGCTGCTGCATACTCCTATATCTTTAAATGACAATTTATCTCTGCGTATCTGCCATGCCTGCATTAGCTACTTGAATTCGTGGCAATCCTTCAAAAACCGCTGTTTGTCGGCGCAAACTAAGCAACGTTCTTGGCTAGATGGGACTTCGTCGTCACAAAAGTCAAAAGTAAATCCTGAAAACACAGCCGATAATCACTGTGATGATCATCAGCAGCAGCAACAGCAAAAAGATGAACAATCTTTGGCATCCTCCATATTGGAGGGTATATCAACGTTGAAAAAAAGAAAATCTTTAACAGTCTATGTGAGTCAAAAACAACAACAACAATTGTTGTGTCAAAAAGAACCATCTCAAGCAAAACTCGCACTACCACAACCTTCTCAGGCACCACAATTACCACCACAACTACCACTACTAACATCGTCCCCAAAAATCAAACATCCAGATCATCCAGTCGAAGTTGCTGCTACTACTACAACAACAACAGCTGCAACTAAGCCGTTGTTGACTACTACTAAACGTCGTTACACTAGACATAAATATTCTCAGCGACAAGTAGAGCAAGCGAATTTGCATCGTTCGCAATCGCAATCGCATTCGACTACTACATCTGCTTCCTCCTCCCGTTGTAGTAGTAGCAATATTAGTAAAATTAAACCGTCCAAATATGACAAAAAGCACGTGCAACACCTCCTCCTGCACCAGCAGCAGCAACAGTTGCAGTTGCAACAGCAATCGTTTGCCATACCTGCGGCACCTTGTTCCACTCCTGTTGCTGCCACTGCTACTATAACGTCTAGTTCGGCTTCGATTGCATTGGCTACTACTGCTTCTTGTTCCAGCACAAGCACTCTGACCACAACCGGTAGTAACGTTACAGCCGCCGTAACGTCCACTGTTGGTCTTGGTTTGGGTGTCGATTGTATCGCTGGAACATCAGCATCGGCATCCTCAGCGGCTGCTTGTTCAAGCGCCGTCCAACAATTGCGTTTGTTTAGACGATACTCCTATAATCCTCTACCTGCAGTACAAATAAAAGATGAACCACTCGATATGGATGATGAGTACAGTAATGCAAAGCATAACGATGAATCTGATGAAATGGTTGACCCAACCATGTTTTTAGAACGTACCACCGATGAAGGCGAAGAACCACTGATGGATTCTACGGCGAACTATGATTATGATAATATAAGACCGCCGGTTGATTTAACGCCCCTACCAGCTGGCACTGTTATACGCATGAGTACCAAAGAGGCTGCCTGTCGTGCTTGTAATTTGAAATTTTCAACACGGGCCAATGCCAGGCGACACGAAAAGAATCTACATCCTCATCTATTCGATACTCTGGAAGAGAATGATACAACGATAAATAAACAAACGGCCGCATTAAATGCTTCTCTAGAATTGCAGCGAGCCGTTGCAGCGGCTGTGGCCGCAGATGCCTGCAAATTGACGGGTGGTGGTGTTATAACACCACAGAAATACCGCCATGAAGTCGTTACGGCTTTCAATAATTCCTGTGAGGTTGGCTACGATTACGACAGTCCCGAGAAATACCAACATTTGCTTACCGACGAAAAGATTGTGTTCCTGCAGCAAAATGACGAATTTCTGCGACAATACCAAGCGATGACCTGTCGCTGTTGCAATCGCTTCTACACCACGTACAAGAACTTTATGGCTCACATGCGTAAAAAGTACCTAACATTACCAAGAAACTGTTGCTTCAACTGTTTGAAACTCAACGATTCCAAAGCGCTGTTCATCTCTCATCTGAAGAAGCGCAATTGCATAAATCTGCACAAGGTACTGCACAATCTTATGTCGAAAAATGCCAACTTTGCGGCAGCTGTCAGTGCCACGGTGGCGGCCGCACCCGAGAAATTGCGCGCCAAAGAACTGTTGGTCAATAAAATGTACGAATGTAGACTTTGTCCGAAAACGTTCCGTTTGAAGTTGGAATTTCGTACGCACGTCTATGAGGAACATGCCGATGTTCAACGCAAGGATATCAGCAATACACAGTGTAGTTTCTGTGGTGTGGATAATGACGATCCGGCGGAACGTAAACGACATTATAATAATATGGATTGTATAGTTACGTTGCGCTGTGTCACGTGCGATACGAAACATGAGACGCAGCACAAGTTCATGGAACATGTTCAGGACAAGCACATGGCGAATTTTGGCGAGCCAACACAGTTTGGCGGTGGTGGCGGTGGAAGTGTGGATAATTCGCCGGGAAAGATGTCGAATTTGGGTGGAATGTGTGGTGCTTCGTCCGCCGACGAATCTCGCAACAGTTTCAATGTCAGTCTCATAAATACTAGCCAACCTCGTGCTCAATACTTCTCACGCATGCCACAAGCTTGCCCCATTTGTGGTCAACAATACAACAATTACAATAATGTACTGCGCCATATGGAGTCCAAACATCCCGACCAGTTGCCACAGACCTACAAATGTGTCAAGTGCGGCCAGGGCTATCCAAGGCTCTCCAATCTGCGTGAACATATGGTCAGTGCTCATGGAGCGGATAAAGCACGCCATACGGGCTTTGAGTATATTGTCAATGCGGATGCTGTTAAGAGTACTACGGATGGCAGCACGGGCGGAGCCACTACCCAAACACAATATACGGGACGTTATGATTATGTGATGAAGGATTTGATGTCTATAACAAATGGTGGGACAATGGATGATGACGGGGAATATGAGAATTCGTCGAAGAAAATGCGTTACGATGGCGGTTCTTCTAGCAACAACGGCGGTACGTCGACCAGTGCAAGTCCCCGAGAATGTCCCATATGCAATGCTGTATTTGCAAACAACATTGGCCTGTCCAACCATATGCGTTCGCATCAAAGTGCAGCCAACAACAGTTTCAGTTCGAACTCCAAGTCAATGAGTGGCAACAATGTGCTGCACACACCGATATCTGGTCAGCAGGCGATTTTAAAGAAATCCTTGGAGCAGGCGGCCGATCGACGATTCCGGCGAATGCGTTGTCGCATTTGTCAGCGGCGTTTCTCGTCCAAGAAATCATATCGTTATCACATGTTGAATGACCATCAAATACGCAATGTTCAATTTATCAAGTGTAAATTGTGCGATGCCGAATTTGCCTACGAGAAGGGCTTGAAGGTGCACATGTTCAAAATACACAACACACTGCTGAAGGACGACATGATTATCAAACAGTATGAGTGTGAAATCTGTTCAATTGTATATCGCACGGATGTGGAGTTGCAACACCATCTGGCCAATGTACACAATAAGCAAGGAGGTGGGGACACCTCTGCCCTCGAAGGTGATGATTATAATGCCGATGAATCGATGGGCGCCGGTGGAGGTGGTGAAAATTCTACAACTGCCGATATGTCGGGTATATCGACACCTGTAAGTGTTGTCGCCGGAGGTGGGGATAGCAGTGTGGGCCCCTTGTATTGGTATCAATGCAAATACTGTCCCTCCAATTTCAATACGAATAAAAAGCTGGCCATTCATATTAATTCGCACGATGAGTTCGATTCGAATGACTATTCTTGCAAGGATTGTGGCAATGTTTATAGTGGCCGAAAAAGTTTATGGGTTCATCGCTACAAAAAACATCCCCAGATACCGGAACCGTCGGAGTGTATCTTATGCAAAAAGATATTCTTCGACAGTCAAATGCTGGATCATCACATACCCACATGCAATCGCAAGCCAATCACCTCCGCCACGCAAGAAGCTGGGGGACAAGCCACCGTCTACAAGCACAAGACcggtgacgatgacgacgacgatgatgaacaatcacgcgacgctgatgatTCCATTTCCACAAATTTGCAGGCTGCCACGGGTAATTTAAAAATCAAATTACCCGAGGTGGCCTGTACGATTTGTGGGGCACGTTTCACCGATCAGGAACTGTTTGCCAAACACATCCAAATGCACGAAAGGGAATTGTACACGGATAATCCGTTGGCCGCCATGTTCGATACCGGTCCGGCCGATCCAAATCAATTCTATATGGATCGTGTAAACGATAATGGCGAGTATGCATGTGATTTGTGTTCGAAGACCTTCACACAAATGACGGCATTTAAAGTTCATAGGAAATGGCATTTCAGAGGTGATAACAAACAGAACGATGCCGATCAACTTGTTACGAATCAGGCCCACAACAACAACAACAACAGCCTGTCGCACAGCAAACCGCAACAGCAGAAACAACCACCACAACAGCAGCAGCAGCATCCGCCGCAATCGCAGAAGTCGATCAACCATCAACATCTACTGGGATTACAAGCGGTGGGTTTAATGCCGCGACAACAATTAGCCAACACGTCGGCCTCCCACCCGACGCCGAACCGATCCCAGAAACGCAAACGCGAACTTAAATGTCAATATTGCCCGTCCACCTTCATCAGTAACAACAATTTGCGCCGCCATTTGTTCGAATTGCATAAGAACGAAATTGGCAATTTACCCGAACCACCGAGAATCGAATGTGATGTGGCGAATAGTTGCCGCAAATGTAATGTAAAATTCGAATCAAAGGCTGAGTGGATTGAGCACAAGGTGGCCGATGCACGAGTGATGAAACCGTTCGGTCCATTCCAATGGGGCTGTGATTTATGCGGTGCATATGTGTCGCGCAAAGAGAAACTTATCAATCATTTGCACAACCATATGAAAGATCAGGTCATAGTGCCCGTAGAATATAATGAATCCGGCCAGATGCAGCACAACACATCCGACCATCAGGATCAGTCCGAGGAACAGTACGAGTTTAAGAAAATCAAATTACCCgcgctacaacaaaagccaatgtcggcggcccaaacagaagacgagtcccgtgatagtgccaaagaacagtacgattacgatgatgatgatggtgacgaaggcgatgaaaacgatgagaatgaagaacaagaagagggcgttaatgttggccaaaaccagcatgaagaatacgaggaagaggaggaggatgatgatgacgatgaagaggagttgatcgaagaagtgtttgatgatttagccgtcggtgctcagcaaacagtaggtggtgaggaggaggaagaagaggatgacgacgatgatgatgatgacgacgacgatgatgatgacgaagacgatgatgatgacggtgacgatgaggatgtagatgaagaagatcctgctacgaatgaggacaccaacgaggtaccaccacctagtcacaagccttcacaaataacgcagcctcgttcctcaaatgattccgaggtagatgaggatgacgacgatgatgatgattccgacgaatttgatgatgacgatgCTTCTTCTACGGAACATCGCAAACCGGCCGTTGTCGCCAAGGCTGTTGTTAAATCTCGTTTCTCCTGCGATCTATGCCAAGTGTATTTCGATTCTCAGCTAGAACTGCAGAAGCACGTTAAAATGCATTTCCTCAATGGGCCCGGTTCAGTGACGCTGACTGGCATCAAGACCTCCAACAAATCTTCTTCATCTTCCAACAAGAGCCGCAGTAGTAGTAGTGACGTTTTGGCGATATCCTCATCATAG
- Protein Sequence
- MDFDSGWILPSLLHTPISLNDNLSLRICHACISYLNSWQSFKNRCLSAQTKQRSWLDGTSSSQKSKVNPENTADNHCDDHQQQQQQKDEQSLASSILEGISTLKKRKSLTVYVSQKQQQQLLCQKEPSQAKLALPQPSQAPQLPPQLPLLTSSPKIKHPDHPVEVAATTTTTTAATKPLLTTTKRRYTRHKYSQRQVEQANLHRSQSQSHSTTTSASSSRCSSSNISKIKPSKYDKKHVQHLLLHQQQQQLQLQQQSFAIPAAPCSTPVAATATITSSSASIALATTASCSSTSTLTTTGSNVTAAVTSTVGLGLGVDCIAGTSASASSAAACSSAVQQLRLFRRYSYNPLPAVQIKDEPLDMDDEYSNAKHNDESDEMVDPTMFLERTTDEGEEPLMDSTANYDYDNIRPPVDLTPLPAGTVIRMSTKEAACRACNLKFSTRANARRHEKNLHPHLFDTLEENDTTINKQTAALNASLELQRAVAAAVAADACKLTGGGVITPQKYRHEVVTAFNNSCEVGYDYDSPEKYQHLLTDEKIVFLQQNDEFLRQYQAMTCRCCNRFYTTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHNLMSKNANFAAAVSATVAAAPEKLRAKELLVNKMYECRLCPKTFRLKLEFRTHVYEEHADVQRKDISNTQCSFCGVDNDDPAERKRHYNNMDCIVTLRCVTCDTKHETQHKFMEHVQDKHMANFGEPTQFGGGGGGSVDNSPGKMSNLGGMCGASSADESRNSFNVSLINTSQPRAQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKSTTDGSTGGATTQTQYTGRYDYVMKDLMSITNGGTMDDDGEYENSSKKMRYDGGSSSNNGGTSTSASPRECPICNAVFANNIGLSNHMRSHQSAANNSFSSNSKSMSGNNVLHTPISGQQAILKKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGGGDTSALEGDDYNADESMGAGGGGENSTTADMSGISTPVSVVAGGGDSSVGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECILCKKIFFDSQMLDHHIPTCNRKPITSATQEAGGQATVYKHKTGDDDDDDDEQSRDADDSISTNLQAATGNLKIKLPEVACTICGARFTDQELFAKHIQMHERELYTDNPLAAMFDTGPADPNQFYMDRVNDNGEYACDLCSKTFTQMTAFKVHRKWHFRGDNKQNDADQLVTNQAHNNNNNSLSHSKPQQQKQPPQQQQQHPPQSQKSINHQHLLGLQAVGLMPRQQLANTSASHPTPNRSQKRKRELKCQYCPSTFISNNNLRRHLFELHKNEIGNLPEPPRIECDVANSCRKCNVKFESKAEWIEHKVADARVMKPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKDQVIVPVEYNESGQMQHNTSDHQDQSEEQYEFKKIKLPALQQKPMSAAQTEDESRDSAKEQYDYDDDDGDEGDENDENEEQEEGVNVGQNQHEEYEEEEEDDDDDEEELIEEVFDDLAVGAQQTVGGEEEEEEDDDDDDDDDDDDDDEDDDDDGDDEDVDEEDPATNEDTNEVPPPSHKPSQITQPRSSNDSEVDEDDDDDDDSDEFDDDDASSTEHRKPAVVAKAVVKSRFSCDLCQVYFDSQLELQKHVKMHFLNGPGSVTLTGIKTSNKSSSSSNKSRSSSSDVLAISSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817689; iTF_00679746; iTF_00816754;
- 90% Identity
- -
- 80% Identity
- -