Basic Information

Insect: Polietes domitor
Gene Symbol: -
Assembly: GCA_947397865.1
Location: OX377622.1:45843507-45849345[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.33 60 6.1 0.6 2 23 17 39 16 39 0.93

2 16 0.0066 1.2 11.4 2.0 1 23 46 69 46 69 0.94

3 16 3e-06 0.00055 22.0 0.8 1 23 75 97 75 97 0.98

4 16 0.0014 0.26 13.6 2.8 1 23 103 126 103 126 0.97

5 16 3.3 6e+02 3.0 0.0 8 23 139 154 138 154 0.90

6 16 0.00013 0.025 16.8 0.2 3 23 162 183 160 183 0.95

7 16 0.001 0.19 14.0 1.6 2 23 193 215 193 215 0.95

8 16 0.0027 0.49 12.7 2.2 1 23 222 245 222 245 0.96

9 16 9.8e-06 0.0018 20.3 0.3 1 23 251 273 251 273 0.98

10 16 0.02 3.7 9.9 8.7 1 23 279 301 279 302 0.94

11 16 8.7 1.6e+03 1.6 0.1 14 23 328 337 323 337 0.88

12 16 3.3e-05 0.006 18.7 0.1 1 23 342 365 342 365 0.97

13 16 0.005 0.91 11.8 0.4 2 23 372 394 372 394 0.94

14 16 0.013 2.4 10.5 3.2 1 23 401 424 401 424 0.95

15 16 3.9e-06 0.00072 21.6 1.5 1 23 430 452 430 452 0.98

16 16 0.00022 0.041 16.1 4.8 1 23 458 480 458 481 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.33	60	6.1	0.6	2	23	17	39	16	39	0.93
2	16	0.0066	1.2	11.4	2.0	1	23	46	69	46	69	0.94
3	16	3e-06	0.00055	22.0	0.8	1	23	75	97	75	97	0.98
4	16	0.0014	0.26	13.6	2.8	1	23	103	126	103	126	0.97
5	16	3.3	6e+02	3.0	0.0	8	23	139	154	138	154	0.90
6	16	0.00013	0.025	16.8	0.2	3	23	162	183	160	183	0.95
7	16	0.001	0.19	14.0	1.6	2	23	193	215	193	215	0.95
8	16	0.0027	0.49	12.7	2.2	1	23	222	245	222	245	0.96
9	16	9.8e-06	0.0018	20.3	0.3	1	23	251	273	251	273	0.98
10	16	0.02	3.7	9.9	8.7	1	23	279	301	279	302	0.94
11	16	8.7	1.6e+03	1.6	0.1	14	23	328	337	323	337	0.88
12	16	3.3e-05	0.006	18.7	0.1	1	23	342	365	342	365	0.97
13	16	0.005	0.91	11.8	0.4	2	23	372	394	372	394	0.94
14	16	0.013	2.4	10.5	3.2	1	23	401	424	401	424	0.95
15	16	3.9e-06	0.00072	21.6	1.5	1	23	430	452	430	452	0.98
16	16	0.00022	0.041	16.1	4.8	1	23	458	480	458	481	0.96

Sequence Information

Coding Sequence: ATGCACATGAAAGCGGTCCACCTGCCGAAAGCCCCCCGAACAAGGCAACAGTGTAAATACTGCAAAAGCTGGCTGGCTTCCAAGAGTGGACTGAGAACGCATATCTTGAATATGCATGTCCATGCCGATACGGAGCATCGTTGCGAGATATGTGGCTTTGTATCCTCATCCCGCGAGGCTAAAAAGAGACACATACAGTTTAAACATAATCCGGAAAGAAAGCACAAGTGCTCCGTTTGTGACAAATCCTTTAAAGTAGCCATTCTGTTGAGAGAGCACATGGCTACCCATACCGGTATTGATTTGTACAAGTGTCTGTATTGTGAGGCCACCTTCAAGTCGAAATCCAATCGCTCGACACATTCGAAGCGTGTCCATCCCGTCGAGTATGAGAACGCTATGATCAGGCGTCCACGTCCATATCCCACACAAGAACGTTTGACTCTACACCTCCGTTATCATAATCCTTCCAAAGATGTTATCTGTGATATATGCGGTAAAGTCATACGTACGCTAAGCTCTCTGCATGCGCACAAGAAAGTGGTGCATCGTCCCAAGCCGCAAAAGGTGCCGGAACAATGCAAGTACTGCGGCAAATGGTATTCTACCCGCGCCCACATGCAAAGTCATATCTTGAATATGCATGTGCATGCCGACAAAGAGCATCGCTGTGAGATTTGTGGATTTGTGTCCTCCTCGAGAGAAGCCAAAAAGCGGCATATACGTTTCAAGCATAATCCCGAAAAAAGACATAAGTGCGCCATGTGCGACAAAGCTTTTAAGGTGCCCATTTTACTGAAAGAGCATATGGCCACCCATACCGGAATTGATCTGTATAAGTGTGCCTATTGTGAGACCACATTCAAATCCAAATCGAATCGCACAAACCACTGTAAACGTCATCATCCCGAGGAATACAATTCCAATTTGAAAAGACGCCCTCGCCCCATGTTTCGTTACAATTTCAGATTTGCATGTGAAAAATATTTGACTAGACATCTGAAATATCATCCTTCCAAAGAGTATATCTGCGAGTCATGTGGTAAAGTAACACCCACTCTAGCCGTTCTCAAGCGACACATGCGCAAAGTTCACGCCCCGAAAGTACCTGCACAATGCACCTATTGCGGCAAATGGTATGTGACCCGGTCTCTCATGCTCCGGCATGTCTTAAATATGCACACGACTGCCGACAGCGAACATCGCTGTGATATCTGTGGCTTTGTCTCGTCCACCAGATCGGCCACAAGACAGCACAAACGATTCAAGCACAATCCCGAAAAGAGACATAAGTGCACTATGTGCGAGAAAGCTTTTAAAACGCCCACTTTGCTGAAAGAGCACCTGGCTACCCATACTGGAGTTGATTTGTATAACTGTGCCTACTGTGATGCTACGTTCAAATCGAAATCCAATCGATCCACTCACTACAGACGTCATCATCCAGTCGAATATAATGCCAATATGAGAATTCGTCCTCGTCCGACAGCTATACCAAATTATGAATCTATACCCTCCACCACGGACCACTCTCTGCTATAG
Protein Sequence: MHMKAVHLPKAPRTRQQCKYCKSWLASKSGLRTHILNMHVHADTEHRCEICGFVSSSREAKKRHIQFKHNPERKHKCSVCDKSFKVAILLREHMATHTGIDLYKCLYCEATFKSKSNRSTHSKRVHPVEYENAMIRRPRPYPTQERLTLHLRYHNPSKDVICDICGKVIRTLSSLHAHKKVVHRPKPQKVPEQCKYCGKWYSTRAHMQSHILNMHVHADKEHRCEICGFVSSSREAKKRHIRFKHNPEKRHKCAMCDKAFKVPILLKEHMATHTGIDLYKCAYCETTFKSKSNRTNHCKRHHPEEYNSNLKRRPRPMFRYNFRFACEKYLTRHLKYHPSKEYICESCGKVTPTLAVLKRHMRKVHAPKVPAQCTYCGKWYVTRSLMLRHVLNMHTTADSEHRCDICGFVSSTRSATRQHKRFKHNPEKRHKCTMCEKAFKTPTLLKEHLATHTGVDLYNCAYCDATFKSKSNRSTHYRRHHPVEYNANMRIRPRPTAIPNYESIPSTTDHSLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -