Pdom054618.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- -
- Assembly
- GCA_947397865.1
- Location
- OX377621.1:172108361-172114093[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 1.3 2.4e+02 4.2 2.4 2 23 332 354 331 354 0.95 2 28 9.4 1.7e+03 1.5 2.3 6 23 364 381 364 381 0.97 3 28 1.2e-05 0.0023 20.0 5.2 1 23 387 410 387 410 0.93 4 28 0.013 2.4 10.5 2.1 2 23 494 516 493 516 0.95 5 28 0.83 1.5e+02 4.8 1.8 6 23 526 543 521 543 0.96 6 28 1.1e-05 0.0021 20.1 4.3 2 23 550 572 549 572 0.96 7 28 0.071 13 8.2 1.2 2 23 632 654 631 654 0.95 8 28 0.00032 0.059 15.6 0.5 1 23 687 710 687 710 0.97 9 28 0.0024 0.43 12.8 0.8 1 21 718 738 718 741 0.90 10 28 2.2e-07 4.1e-05 25.5 3.4 1 23 761 784 761 784 0.97 11 28 0.065 12 8.3 0.6 2 23 869 891 868 891 0.90 12 28 0.012 2.1 10.7 0.6 1 23 924 947 924 947 0.91 13 28 0.00024 0.045 15.9 1.3 1 23 955 978 955 978 0.91 14 28 4.2e-05 0.0077 18.4 3.4 2 23 999 1021 998 1021 0.94 15 28 0.12 22 7.5 2.8 2 23 1109 1131 1108 1131 0.95 16 28 0.0022 0.41 12.9 0.3 1 23 1164 1187 1164 1187 0.93 17 28 4.8 8.9e+02 2.4 1.7 3 19 1197 1213 1195 1218 0.85 18 28 2.1e-06 0.00038 22.5 1.6 2 23 1247 1269 1246 1269 0.96 19 28 0.0014 0.25 13.6 0.2 2 23 1357 1379 1356 1379 0.95 20 28 0.0011 0.2 13.9 0.3 2 23 1413 1435 1412 1435 0.89 21 28 0.053 9.7 8.6 4.4 1 19 1443 1461 1443 1466 0.92 22 28 7.5e-08 1.4e-05 27.0 2.7 2 23 1484 1506 1483 1506 0.97 23 28 0.096 18 7.8 1.3 2 23 1659 1681 1658 1681 0.95 24 28 3.7e-06 0.00068 21.7 1.9 1 23 1714 1737 1714 1737 0.95 25 28 0.00031 0.058 15.6 1.4 1 23 1745 1768 1745 1768 0.92 26 28 3.2e-07 6e-05 25.0 2.1 2 23 1791 1813 1790 1813 0.96 27 28 1.3 2.3e+02 4.3 1.7 1 23 1819 1841 1819 1841 0.87 28 28 0.22 40 6.7 2.7 1 23 1847 1870 1847 1870 0.96
Sequence Information
- Coding Sequence
- ATGTCGCAAACAAACCGCTGCCGGTTATGTGTGAATGTTTACAAAGACTCGAAAAGTCTTTACGATGACTATGGCCGCGGCACGGAGTTATACGATATCACCTACAACTATTTCCATCCCAGGATTTTGAATATGAGGCAATGGCGCCACCTTACCGGAATATGTTTACAATGCTTTCGCCATATTTGTGACTTTCACAGCTTCCAGGCATCTGTGCAGGTGGCCCAGCTGGAACTCATTGAGGAGGTCAACGCTGATATTGCTGTAAAATCAGAGCCTATCGAAATACTGGACGAATTTGAAGATGACGGACTATTGCATGATTATCCCAATCCGACTGACAATCATTCATGTTATGATACATCTATGCACCAGGCGGATGGAAATGCATGGCCTGAAAACAATCCCTATGCTGAGGATTATAATTATTCCAATGAAGCCAACGCCATAGAAGACTCATTGTCAGAAGAAACACTTCTGATGGAATGCGATTTTGAAAAAGATAATATTCCAATTGGCGAAAATAATGTTACACAAGAAAGCACGGAACTAGTGAATGTGGCGCCCAACGTCATAGAGGCCACATACGATGATGACCATAATGATTCACAAGAAAGCGCGGAGCTAGCGAACATGGTGGCGCCCAACGTCATAGAGGGCACATACGAAGAGACCCCTTTGAAGATAAGTGCGGTGCAAACAGTTGCAGACAGTTTTAAAGAACATAATACACTGCCGGAAGATCTCACTCCGGATCACTATGCTGTCGAAATAGTTGCAGACAGTTTTAAAGTTCATAATACACTGCCGGAAGATCTCACTCCGGAAATTGATGCGGCCGAAACAGTTGCGGACACTTTTAAAGTTCATAATACACTGCCGGAAGATCTCACTCCGGATATTGATGCTGTCGAAATAGTTGCAGACAGTTGTAAGGAGCACAATACACCAGATGATATCGATGATTTTGTGCTCCATTGGAAACCTATTCTAAAATGTGATCTCTGCTCGGATTCTTGCTCAAAGCTTTCGTTGTTGCAGGAACATTTCCGCCTGAGACATGACAATGTCAACTGCTACATTTCATGTTGTGGCAGAAAGTTTAGTGAGACTCATAAAATTAAAAAACATGCCTCCAAACACCTCGATCCGAGCTCATTCAAATGTGATCTGTGTGGCTACTGCTTTACAAATCAACATAATTTAAAGAGGCACGTGCTCGGCAAACATCTGAAATTCAAGATCCACGGTAGAATTGTGACGAGTCGCCTGCGACCAAAGCGAACTGCTGAAAAGCCAGATAACGCCACAAAAGTAGTTGACGAAGTGGCGCCCAACGTCGTAGACATGCCAAACGCGGCCGAAACAGAGGCAATACTTAACAATACTCAAGATGATAACTCGCCACCGAAATGCTCCAGTCGCTTAGCCAGGTTGCAGGAACTCGACGATCTCATCGTCAGATGGAAACCCATTTTAAAGTGCGAACTTTGTCCTGAATCCTATGCGAAGTTTTCTTTGTTGCAGCATCATTTTCGCCAGAAACACGCCGACGAAAAGTGCTACATTTCATGCTGCAATCGAACTTTTAGTACGAGCGGTAAAATTAAGCAACATGTTCTACAACATGTCGATCCGAATGCTTTAAAGTGCACGTTTTGCAATAAAAGCTTTTCAAATCGTCACAATTTACAGAGACATGCCCTCACGTCTCATTTGGTTTTCAACAAGCAGAGTGCGACAAGTACAAAAATGGCCACAAAACGCAAACTCGTTCGGGATGGCAGGAATAATATTTCCATACCCTCAGCAGAAGGCGGCAAACGTTATCGTCGCTCCAACAAATGGCTGGGAGAGCTAGATGATCTCATTAGCAAATGGAAGCCCACTATAAAATGTGACCTGTGTCCGGAGACATGTGCCAAGTTTTCGCTGTTGGAGGAACATTTTCGCCAGCAACATGTCGACGAAAAATGTTACATTTCATGTTGTGATCGCCGGTTTAGTGCCAGGCCCAAAATTGAGGAACATGTCCTGCAACACATCAATCCGAATGTTTTCAAGTGTGAGCTGTGCGACAGTCGCTTTACCGTGTGGGTTGCCTTAAAGAAACATCTGCTCAGGCAACATCCCGAGGTACACAACAAGAAGTACGAATGCGTGAAATGTGATAGGCGATTTCCCACAAAACAAGGTCTAAGGATACATTTTACTTTTGCCCACGCCAAGCTGATACAACAACGAACTAAACGAGCGGACAAAGTGGGTGCACGGCCTGTCCACAAGTGCACTAAATGTGGCAAACAATTTTCCAATCGCACTAATTTGAATAGGCATATCCGGGTGATACATAAACAGTCGAAAAAACAGATTTCGAACAAAAAAACTGCGAGCAAACGCCAACTCCTAGGAAAGTATGTGATACAATCACAATCTACGGCAAGTGAAGAAGTTGTTGAACCTGCAAATCTTAACATTTCCAAGGAAACTGGCCCTGGTGGAGTTGACGATAGCCCTTCTTCGAAAGATGCCATTTGTTATCGTCGCTCAAAACAATGGCTGGGGGATCTCGATGAACTCATTGGCAAATGGAAACCCATTTTAAAATGTGATCTGTGTCCAGAGTCCTATCCGAAGCTGTCCTTATTGGAGGAACATTTCCACCAGCAACATCCCAACGAAAAGTTCTTCATAACATGTTGTGATCGTCGTCTCAGTCCCAAGTCCAAAATCGAAGAACACGTCCAGCAACACATCGACCCGAATGCTTTCAAGTGCAACTTATGCGGCAGCCAATTTACGCTTCGGATTACCCTAAATAGGCATCTGGTGGCGAAACATCCCGATGTATATCACAAAATGTACGAATGCAAGAAATGCAACAAAACTTTTTCGACAAGCACCGGCATGAAAATACATTTTTCCTGGGCCCATGTTAACCTCGCCCAAGGACCTGACAAAGCTAGCCCCCTTGTTAATGTTCGACCTGTCAACAAGTGCAACAAATGTGGCAAATGTTTTGCCAGCAGACAGAGCTTGAAAAGGCATGTGCTACTGATGCATCTGAAAGCCCAAAAGCAGAAGACAAACACAAAGACTGCCAGCAAACGAAAACTGACGCAAGATCTAAAGATAACGACAGCAGAGCCTCAAGAAGTTGCGGAATTTGAGAATGCACCGATCACCGAGAACATTCAACTCGTATCAGCTGATGTTGCTGAAGGTGTTGATGGCCAAACGCCTGAAGTTGCAGTTTGCTATCGTCGCTCCAAAAAATGGCTAGAGGAATTGGATGAGCTGGTGGCCAAATGGCAACCCATTTTGAAATGCGAATTATGTACGGAGTCCTGTTCAAAGTTCTCACTGCTAGAGGATCACTTCCGCCAGCAACATGCCGCTGAGAAATGCTACATTTCCTGTTGTGATCGCCGGTTCAGTGCGAGGCCTAAAATTGAGGAACATGTCCTGCAACACGTCGACCCGAATGCCTTCAAGTGTGATTTGTGCGAGAGTCGCTTTACCATGTGGGATGCCTTGAAGAAGCACGTGCTCGCCCAACATCCCGAAGTCCAGCAACAAATGTACGGCTGCGAAAAATGTGACAAGAGATTTCTCACAAGACTAGGTCTAAAAATACATTGTACTTCTGTTCATGGCAGGCTCACAGCAGAACGCCCTAAAAGCCCTGCCAAGGGCAAGGCCCAAGTCAAAGCCCCTGTTAAGGTGCGACCTGTCAACAAGTGCCAGAAATGTGGCAAAAGTTTTACAAAACGAGGAAACCTAAAGAGACATGTGCTCGTGATGCATCTGAAAGCCAAAAAGCCGATTGCAAATACAAAAATTGTTCGAAAGAAACTTATTCTAAGGCTCACACAAGCTGGGGACAAACACCAAGCGTCGACAAGTTTCGCACAAGCAGCAGATGAGAATTCAATTGATGCTGATATTTCTTCAAGAGTTGTTGGCGGAGGCAATATCCCCTCGGCGGAAGGTGGCAATCGTCATCGCCGCTCCAACAAATGGTTAGGGGAACTGGACGATCTTATAGTCAAATGGAAACCCAGCTTAAAATGCGAGCTATGCCCTGAATCATTTGCGAAGTTCTCCTTGCTGGAGGATCATGTTCGCCAGCAACATGCCGATGCAAAATGTTACATTTCCTGTTGTGATCGCCGGTTTAGTGCGAAGCCTAAAATCGAAGAACATGTCCTGCTTCATGTCGATCCGAATGCCCTCAAGTGTGATTTGTGTGAGAGTCGCTTTACCACATGGGATGCCTTAAAGAGACATCTAGTGGCGCGACATCCCGAAGTTCACCACAAAAAGTACGAATGCGTCAAATGTGACAAGCGATTCCACACAAAACAAGGTCTGAAAATACACTGTACTTCGGTTCATGCAAAGATCGAGGCACAACGCCCCACTGTTGTGCCTTTACGAACTGGAAACAAGTGCCACAAATGTGGCAAAAGTTTTTCAAATCGCGCGAATTTGAAGAGACACATGCTCGTGATTCATCAAAAATTGAAAAAGCCAAAAATTGCCGGAAAAAACAAACTCGTTCTAAAATCGGCCGCTATTAAAGAACCGGCAGAAGTGGCGCCCAATGCAATGGAGGGAACAGATGGCATTTCAAAAGATAATGTAGGTGAAGGTGAGGACAAGATTCCCTCAAGCTCAAAATGTGCCGCAAAACGCAAACTCCTTCCCAAATCGGCCGCCATTAAAGAACCGGCAGAAGTGGCGCCCAATGCAATGGAGGGAACAGAAGAAGGTGGTGGTAACAAGATGCCCTTAAGCACAAAACGCAAACTCCTTCCAAAATCGGCCGCCATTAAAGAACCGGCAGAAGTGGCGCCCAATGCCTGGGAGAGAGCAGATGACATTTCTGAAGGTGTTGCTGACAAGCTGACCTTGTCGAAAAAGAGGCTGGAGAATCTCGATGAGCTCATAGCGAAATGGCGACCCATTTTAACGTGTGAACTATGTTCGGAGTCATGTGCAAGCTTCTCGTTATTGGAGGAGCATTTTCGCCAGCAACATGCCGACGAAACTTGTTACATTTCATGTTGCAATCGCAGGCTTAGCAAGAGGCACAAAATTAAGGAGCACGTTGTCCAGCATCTCGAGCCTAATGCATTCAAGTGTGATCGATGTGACAAAAGCTTTACCATGCGCAATAACTTACGAAGGCATATGGCTCTGCAACATGCCGGCGACATCCACAACCAGTACGAATGCGAAACATGCCATAAACGTTTTTCAACCAAACAAGGGCTGAACTTACATGGTACGGTCGTTCATGCCAAGCAGGGAGAACAAAGCGTCTCAGGCTCCATTAAGGTCATTGTTAGTGTACCACCGCTCCAGAAATGCAAAAAATGTAGCAAAAGTTTCACATCATCATCGAATTTAAATAAACACATGCTTATTGCACACGGGCCAAATCTGCAGCATAAATGCAAAGCTTGTGGCCAATCCTTTAAGTGGTTCAATCAGCTGCTTGAACATAGCACCATTCACACGGGCAAAGATATTTATGCCTGTCTATTCTGCCCGTTGACCTTTAAGCACTATATCTCCGTGTATAAACATCGGAAGAAGGCACATCCCCACGAAGGTGGGCCGAAATATTATAAAATGTTGATGTAA
- Protein Sequence
- MSQTNRCRLCVNVYKDSKSLYDDYGRGTELYDITYNYFHPRILNMRQWRHLTGICLQCFRHICDFHSFQASVQVAQLELIEEVNADIAVKSEPIEILDEFEDDGLLHDYPNPTDNHSCYDTSMHQADGNAWPENNPYAEDYNYSNEANAIEDSLSEETLLMECDFEKDNIPIGENNVTQESTELVNVAPNVIEATYDDDHNDSQESAELANMVAPNVIEGTYEETPLKISAVQTVADSFKEHNTLPEDLTPDHYAVEIVADSFKVHNTLPEDLTPEIDAAETVADTFKVHNTLPEDLTPDIDAVEIVADSCKEHNTPDDIDDFVLHWKPILKCDLCSDSCSKLSLLQEHFRLRHDNVNCYISCCGRKFSETHKIKKHASKHLDPSSFKCDLCGYCFTNQHNLKRHVLGKHLKFKIHGRIVTSRLRPKRTAEKPDNATKVVDEVAPNVVDMPNAAETEAILNNTQDDNSPPKCSSRLARLQELDDLIVRWKPILKCELCPESYAKFSLLQHHFRQKHADEKCYISCCNRTFSTSGKIKQHVLQHVDPNALKCTFCNKSFSNRHNLQRHALTSHLVFNKQSATSTKMATKRKLVRDGRNNISIPSAEGGKRYRRSNKWLGELDDLISKWKPTIKCDLCPETCAKFSLLEEHFRQQHVDEKCYISCCDRRFSARPKIEEHVLQHINPNVFKCELCDSRFTVWVALKKHLLRQHPEVHNKKYECVKCDRRFPTKQGLRIHFTFAHAKLIQQRTKRADKVGARPVHKCTKCGKQFSNRTNLNRHIRVIHKQSKKQISNKKTASKRQLLGKYVIQSQSTASEEVVEPANLNISKETGPGGVDDSPSSKDAICYRRSKQWLGDLDELIGKWKPILKCDLCPESYPKLSLLEEHFHQQHPNEKFFITCCDRRLSPKSKIEEHVQQHIDPNAFKCNLCGSQFTLRITLNRHLVAKHPDVYHKMYECKKCNKTFSTSTGMKIHFSWAHVNLAQGPDKASPLVNVRPVNKCNKCGKCFASRQSLKRHVLLMHLKAQKQKTNTKTASKRKLTQDLKITTAEPQEVAEFENAPITENIQLVSADVAEGVDGQTPEVAVCYRRSKKWLEELDELVAKWQPILKCELCTESCSKFSLLEDHFRQQHAAEKCYISCCDRRFSARPKIEEHVLQHVDPNAFKCDLCESRFTMWDALKKHVLAQHPEVQQQMYGCEKCDKRFLTRLGLKIHCTSVHGRLTAERPKSPAKGKAQVKAPVKVRPVNKCQKCGKSFTKRGNLKRHVLVMHLKAKKPIANTKIVRKKLILRLTQAGDKHQASTSFAQAADENSIDADISSRVVGGGNIPSAEGGNRHRRSNKWLGELDDLIVKWKPSLKCELCPESFAKFSLLEDHVRQQHADAKCYISCCDRRFSAKPKIEEHVLLHVDPNALKCDLCESRFTTWDALKRHLVARHPEVHHKKYECVKCDKRFHTKQGLKIHCTSVHAKIEAQRPTVVPLRTGNKCHKCGKSFSNRANLKRHMLVIHQKLKKPKIAGKNKLVLKSAAIKEPAEVAPNAMEGTDGISKDNVGEGEDKIPSSSKCAAKRKLLPKSAAIKEPAEVAPNAMEGTEEGGGNKMPLSTKRKLLPKSAAIKEPAEVAPNAWERADDISEGVADKLTLSKKRLENLDELIAKWRPILTCELCSESCASFSLLEEHFRQQHADETCYISCCNRRLSKRHKIKEHVVQHLEPNAFKCDRCDKSFTMRNNLRRHMALQHAGDIHNQYECETCHKRFSTKQGLNLHGTVVHAKQGEQSVSGSIKVIVSVPPLQKCKKCSKSFTSSSNLNKHMLIAHGPNLQHKCKACGQSFKWFNQLLEHSTIHTGKDIYACLFCPLTFKHYISVYKHRKKAHPHEGGPKYYKMLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -