Pdom065705.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polietes domitor
Gene Symbol
ZNF275
Assembly
GCA_947397865.1
Location
OX377620.1:178468183-178471602[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 6.5e-06 0.0012 20.9 0.1 1 23 202 224 202 224 0.95
2 15 0.0011 0.2 13.9 0.4 1 23 230 252 230 252 0.97
3 15 2.9e-06 0.00053 22.0 0.2 1 23 265 287 265 287 0.97
4 15 1.5e-05 0.0028 19.7 0.2 1 23 438 460 438 460 0.96
5 15 0.00068 0.13 14.5 1.0 1 23 466 488 466 488 0.95
6 15 4.2e-06 0.00077 21.5 0.3 1 23 505 527 505 527 0.98
7 15 0.0037 0.68 12.2 0.6 1 23 536 559 536 559 0.95
8 15 0.00082 0.15 14.3 5.3 1 23 565 587 565 587 0.98
9 15 0.00018 0.034 16.3 0.4 2 23 594 615 593 615 0.97
10 15 2.2e-08 4.1e-06 28.6 0.7 1 23 621 643 621 643 0.96
11 15 0.0015 0.28 13.4 2.1 1 23 649 671 649 671 0.99
12 15 7.4e-05 0.014 17.6 1.6 1 23 677 699 677 699 0.96
13 15 3.4e-05 0.0063 18.6 3.2 1 23 705 727 705 727 0.99
14 15 6.3e-07 0.00012 24.1 0.7 1 23 733 755 733 755 0.99
15 15 2.3e-05 0.0043 19.2 0.4 1 23 761 783 761 783 0.97

Sequence Information

Coding Sequence
ATGTCTTCGGACTTAACAGCAAATTGCCGCACCTGCATGAATGCAGACAATAGCGGAAAATATTATCAACTATACGATTATATAGAGGGCGACCATATTTTGGAGATGGTGGATGGAATAGTGCCACAAATTCACATCAAGGAGGAGAGCCACTTTTCCCATTTAGTTTGCCAGTCGTGTGTGAATAAATTACTCGAAAGCTATAAGTTCCAACAGCTATGCATTGAAACCGACCGCCGCCTGCAGTTAATGCAGCAGTCTGAGGTGGAGGTGTCTGAAGTGGAACCGAATTTGGTTAAAATATTGGATCCCTTGACCGGTGGTGAGGAAGCGGCGTTTAAGATGAAGCAAGAAACGGAAGATAATGAGCATTTTGAATGCGAAATAAATCCGCATGAATTAGAGGTGACGTTGAAAGCAGATGTGGAATGGGATGGCGGTGGAGGTGTAGATGTGGGTGGTGAGGCAACGGATGGAAGTGATACAGATTCTAGCAACGAGAAGCTTTCAGTTTTAAAAGAAAGGAAACTAAGAAAATCTTTTAAACTACCAGGAGGATCTGAAAAGTCACCCAAGAAGTCCCGCCGCAATTCCAATTCCGTATTTCCCTGTCCCGAATGTGGCAAAGTATTTGATCGTCTGTATCGTTTGAAAAGACATGGAGCCGTACATGCCAAAAAACGCGCCTTTCCCTGCGATATCTGTAAGTACAGTTTTGCCGCTGAGAAAACTTACCGAACCCACATGCTGTTACACGAAAAAGAAGGAATGGAAGGTGGCAATTTTCATGAATTTCAATGTCCCGATTGTCCAAAGAGTTTCGAAAAGAAAGCTTCGCTAATACAACACAGTCAAATACATTCAAAGAAAAAGACTAAAACAAAGGCAAAATTGGACAAAAGCAAAGAGGAGGAAGAAAGTAGTGAGCCAAACGAGTTGGACATAAAAGAGAATGCCGAAGATATTGCAGTCCGAAATGAGAATCATTTAGAATTGCATCACGAGGAACAAGAGCCTTATGTGGAGACGGAGGAGAATGAACAAAATGACACTTGTGAAACATCGCTGAACAACGACGTTGTCGTCAAACACGAAATTGATGTTACACCGCAGATATACGAAGAGCCCGAAGACTATGATGACAACGGTGAATGGTTCGATCACGATTATGAGTATGACGAGGATTCCGAAAATGACACATCTGAAAAAGATAGCCCCAGTAAACCCAGACACGGACAAAATCTTGATTTTGTGGACACGGGCATAGGGGAAATAGAAAAACCCAACAGTCGAAATCGCCGAAATGGCAACTATCCCTGCGAGGTGTGTGGCAAAATATTCGATCGTCCTTATCGCCTGAAACGCCACAGTTCGGTGCATTCTCTCGAAAGGCCGCACGCTTGCGAAGTTTGCAAATATCGCTTTGCCACTACCAATTTACTAAAAATACACATGATCCAACATGAAAACGAGGCCGGTGGTAATTTTTCTTCACAATCACGACCAGATGGCTTCAAATGCCCCGACTGTCCGCGACGCTTTGAGAAGCAGGCTTCTCTATCGGCTCATCGTCAAATACACACGCGAAATGCTTCGGAAGCTAATTACCCCTGCACTGTGTGTCAGCGTAACTTTATGTCGATACGTTCGCTTACGGAGCACATATCGAATAAACATCCTGAAGTGGAGAAGCATAAGTGTGACCAATGCGACAAAACGTTTGTCCTGCACGCCCATTTGCTGGAGCATTTAAATCGTCACAAGGGAAATAAAAACCTGGTCTGTCTCATATGTGAAAAGGAATTCGGTTATACGAATACGCTCAAAGAACACATGCGCACACACAGTGGCGAGAGTCCATATCTCTGTCCACAATGTGGAAAAACATTTAGAAGTGCCAGCAACCTGCGTCAGCATATGGAGCGCCATTTCGGTCTCAAGAAATACCAATGTCCCGAATGTCCCAGTCGTTTCAACTGCCGCTCAGATCTTATAAAACACACCTCAACCCACACAAATTCCAAACCGCATGTTTGCGATGTTTGTGGTTCCCGCTTTACGCGGGCCTATTCGCTGCAGAAGCACAAACTATTGCATTCCGGAGAGCGACCGTTCAAATGTGATCAGTGTAGCATGACCTTTGCTATAATTTACCACTTGAGGcgccacatgcgtacccatacgggagagaagccatacaagtgcaaatactgtgatcgtgcctatgccgaaagtggagatttgaccaaacacctgagaacgcatgtgggtgagaacacctatatgtgtgaccagtgtcccatggctttCAAATATCAATCGGAATTGCGGCAGCATCTATCAGAACATTACAAAATGGCCCAGCAGCTATTGCAGGAAGCACAAAAGATGTCCGATGATGTCCAACAAATGGAGCAAACACAGCAACAGGAGGAGCACCACCAGGAGCCAGAACAACATGAACATGAACTACACCAGCAGCACCATCAACAGGAGCAACAACAGCATCATCCACCCATCAATATATCCATTACAAATCAGCCTCCACCCACAATCATTATACCCATCACCCAACCACCACCAGCAATGAATTTGGTGGACGGCTGA
Protein Sequence
MSSDLTANCRTCMNADNSGKYYQLYDYIEGDHILEMVDGIVPQIHIKEESHFSHLVCQSCVNKLLESYKFQQLCIETDRRLQLMQQSEVEVSEVEPNLVKILDPLTGGEEAAFKMKQETEDNEHFECEINPHELEVTLKADVEWDGGGGVDVGGEATDGSDTDSSNEKLSVLKERKLRKSFKLPGGSEKSPKKSRRNSNSVFPCPECGKVFDRLYRLKRHGAVHAKKRAFPCDICKYSFAAEKTYRTHMLLHEKEGMEGGNFHEFQCPDCPKSFEKKASLIQHSQIHSKKKTKTKAKLDKSKEEEESSEPNELDIKENAEDIAVRNENHLELHHEEQEPYVETEENEQNDTCETSLNNDVVVKHEIDVTPQIYEEPEDYDDNGEWFDHDYEYDEDSENDTSEKDSPSKPRHGQNLDFVDTGIGEIEKPNSRNRRNGNYPCEVCGKIFDRPYRLKRHSSVHSLERPHACEVCKYRFATTNLLKIHMIQHENEAGGNFSSQSRPDGFKCPDCPRRFEKQASLSAHRQIHTRNASEANYPCTVCQRNFMSIRSLTEHISNKHPEVEKHKCDQCDKTFVLHAHLLEHLNRHKGNKNLVCLICEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFRSASNLRQHMERHFGLKKYQCPECPSRFNCRSDLIKHTSTHTNSKPHVCDVCGSRFTRAYSLQKHKLLHSGERPFKCDQCSMTFAIIYHLRRHMRTHTGEKPYKCKYCDRAYAESGDLTKHLRTHVGENTYMCDQCPMAFKYQSELRQHLSEHYKMAQQLLQEAQKMSDDVQQMEQTQQQEEHHQEPEQHEHELHQQHHQQEQQQHHPPINISITNQPPPTIIIPITQPPPAMNLVDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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