Pdom057202.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- -
- Assembly
- GCA_947397865.1
- Location
- OX377620.1:27276079-27279244[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 6.4e-06 0.021 16.6 0.6 15 44 189 215 182 215 0.89 2 9 0.082 2.7e+02 3.4 1.9 18 28 335 345 332 370 0.88 3 9 0.0024 8 8.3 2.3 16 44 389 414 380 414 0.88 4 9 0.0017 5.8 8.8 0.6 18 44 502 525 495 525 0.92 5 9 0.22 7.4e+02 2.0 0.1 18 43 611 634 607 635 0.75 6 9 0.22 7.1e+02 2.1 7.6 12 44 662 691 652 691 0.81 7 9 9.9 3.3e+04 -3.2 0.9 32 44 734 746 723 746 0.74 8 9 0.00015 0.49 12.2 4.6 14 43 846 872 839 873 0.89 9 9 3.2e-05 0.11 14.3 0.6 17 43 976 999 969 1000 0.91
Sequence Information
- Coding Sequence
- ATGTCTCATGCAACAAACTTGTGTCGTTTGTGTGTAAATGCTTGCCACAATTTCAAGAGCCTTTACGACAGTTATGGCCATAGTAACGATACATATGAAATCGCGGCCAAATATTTTGATCCTATGCTTTTGGTCGTGAAGGAAGGAGACACTCCAGCGGTTATGTGTTTAGAGTGCTGGCATCATATATGCGACTTTCATGACTTCCACGAGTCTGTGCTGCTGGCGCAAGAGAAGCTCCACAATGTTGGCCAACTGGCCGAATCACAAATAGAATGTCCGCCCGATCGAATCGCCAGTGTGAACTTTATAGCCGATATTATTGTTAAAGAAGAGGTGGAATTTAGTACTCCGCCACATTTAGATGTTCCTGTTGATTCGTACAATGAAAAATCCTCTTCAGAAGACTCATTTAGTAGGGGCATGGAACCTTTTTCTAACCATGAAAGTTATATCGAAACGGAATTAGAGGAGAATGCGAAAGCAAAATATCTTAAGAGTAAAGATGATGGCAGCGTCGTTCCGGCTATTACCGCAAAACGTCGTCGCTTTCAGACAGAAGCAAAACTATTTACCTGCAAAGTATGTGGCAGACAATTTGCCCGCAAATCGAACTTTCTTCGTCATGTGACCAAGCAACACAAAATGTCAAAAAGATCTGTTCATGCCGAGAACGATTATAACGCAAACCACACGAGTCCTTCCCATAGAATTATTTCAGAAAATGACCTCAATCAAGTGACTTTCGAAGAGGATGGCTACTTCAACGATGATCACGAGCATGTGAGTATCTGCAGGTACGAAATAAAATCTGCTGATGATCATCGCATCGAGGACGACGAAATTAAATACTTGTTGCAAGCTGGCAAAACTAAGAACGTTTCTCGAGACAACGACCAACAAAGAGCAAGCGCGCCTACAAAGCAAGCATATAAAAAGATACCTAGACAATGGACCACTAAAGAGCTTGACGCCGCCATTGCCAAATGGATGCCAAGTTTACAATGCAGGATTTGCCATGAGTCATATTCAAATTTTGGCTTGTTGCAAACTCATTTTCATACCGAACATTCCGATGAAGAGTTCTATGTGACATGTTGTCAGTGCAAGTTCAGAAAACGGAATCCACTTGCAGAACACACACGCTATCACCTTGACCCGGACGCTTTCAAGTGTGAGCTATGTGGCAAACGTTTCGCACGAAGGCAAACTTTACACTCGCACATGATCAAGCAACATAACGTGGTCGCTGATAAAACAGACCTGCCATACGATCGAGTTACAAAATCCGACAGGGAAAGCGATGATTTTATAGCCCAGTGGATGCCCCACTTAGCGTGTGTGGAGTGTCATGTGCTCTGCACCAGTTTTTCTCTGTTGCAGACACACTTTCAACAGCTGCACCCCAATGAAAACTGTTACATAGTGTGCTGCCGTCGTATGTTTGATAACCGGCTAACGTTCGAAGACCATATACGAGGTCACCTTGAAGCCCGACTTTTTACTTGTGCGGTATGTGAGAAAAGCTTTTCCCGTAAGTTTAATTTACAGCGGCACATGGCTACGCTGCACCAAAACTCCTCAATAGATGAGGAGATAGATCATCAAGAAAATGATGATAGTGATGGCGATGAAGAGCCTCGCCAAGAAGAAAAATTCCAGCAGGACGAGAACGATGTCCTCTTGTCGCAAATTAACGAATCAACTACACGAGATGATGCCAGTATTACTCAAACTAATGATAACGAGAGCGGCACCTCTAAACAAATACGAAAAAAACTAATGACTGAGGAATTGGATGAATTTATTGCCCAATTTAGACCGCACTTGAAATGTAACATTTGTAATGCCGCAACATTTCCCAGTTTTTCTCTGTTGCAAGATCACTTCCGGCGTGAGCATTACGATGAAGACTGTTATGTCCCCTGTTGCAAATTCAAGTTCAAGGCACGACACCAGTTTGTCCAACATATAAAACTGCATCTTGATCCAAACGCTTTCCAATGTAAGATATGCGAGAAATGTTTTACGAAAAAGCTAACTTTACATACGCATATGCATAAGCAGCATAAGGTAGTTGCTGACAACGACAGTTATGACGATCCAAATGCCATAAAATCACTAAAGGAAAGCGATGATTTGATAGCCCAATGGATACCGAACTTAACATGTTTGGAATGCAATGTGGCCTGTGCGAGTTATTCTCGGCTACAGCAACACTTTAGCAAGCGGCATAGCCACATAAACTGTTACATTACGTGTTGTGACAGAAATTTCGTGACCACGTCTATGGCAACCTTGTTAGCTGTAAAATATGTGGAAAGGCGTACACTAGGAAATATAACTTACGATGATGAGAATTTGTCATCAAATGATGTCCCAGACAATTGCCACTTCTCCATCGAGGAGGATCTATCTCAGGAGGACAACAACAACAATATTTCGCCAGATGATAGTTTCTCCGAACATGACGATGAAAGCTATATATCATCCGAGCTTATAGAATTACGTTCACAAGCAAATCCCGCACAAATTAAAGCTGTTGTTGGTTGTAAAATATGCGGAAAATGTTTTTCAAGAAAATGCAATTTATATCGACATTTGACCAACAAACATCACATTGCAAAAGATGATATTTCTGCCGATGATTATGAAAAATTCACATCGAATGATGTCCCCAGCAATTATCGCAAACCAAGAGTTAAACGAAAATCAGCTGAGGAGCTTGACGAACTAATATCTCAATGGAAATCTAGCCTAGAATGTGTAAATTGTTCCGAAACATACCCAAGTTTTACCCGATTACAGGAGCATTTTCTCGAGAGACATACCAAAGAACGTTGTTACATCTCCTGTTGCAATTCGAAGTTTACGAGTCGCTACGAAATTTCAGAACACGCTCGAGTGCACTTTGTTCGGGACATCTTTGTGTGTACATTTTGTGGTGAGGGCTTACGGGGTAAATCTAATTTGAAAAGGCACATGCAGGACAAGCATCACACGTAG
- Protein Sequence
- MSHATNLCRLCVNACHNFKSLYDSYGHSNDTYEIAAKYFDPMLLVVKEGDTPAVMCLECWHHICDFHDFHESVLLAQEKLHNVGQLAESQIECPPDRIASVNFIADIIVKEEVEFSTPPHLDVPVDSYNEKSSSEDSFSRGMEPFSNHESYIETELEENAKAKYLKSKDDGSVVPAITAKRRRFQTEAKLFTCKVCGRQFARKSNFLRHVTKQHKMSKRSVHAENDYNANHTSPSHRIISENDLNQVTFEEDGYFNDDHEHVSICRYEIKSADDHRIEDDEIKYLLQAGKTKNVSRDNDQQRASAPTKQAYKKIPRQWTTKELDAAIAKWMPSLQCRICHESYSNFGLLQTHFHTEHSDEEFYVTCCQCKFRKRNPLAEHTRYHLDPDAFKCELCGKRFARRQTLHSHMIKQHNVVADKTDLPYDRVTKSDRESDDFIAQWMPHLACVECHVLCTSFSLLQTHFQQLHPNENCYIVCCRRMFDNRLTFEDHIRGHLEARLFTCAVCEKSFSRKFNLQRHMATLHQNSSIDEEIDHQENDDSDGDEEPRQEEKFQQDENDVLLSQINESTTRDDASITQTNDNESGTSKQIRKKLMTEELDEFIAQFRPHLKCNICNAATFPSFSLLQDHFRREHYDEDCYVPCCKFKFKARHQFVQHIKLHLDPNAFQCKICEKCFTKKLTLHTHMHKQHKVVADNDSYDDPNAIKSLKESDDLIAQWIPNLTCLECNVACASYSRLQQHFSKRHSHINCYITCCDRNFVTTSMATLLAVKYVERRTLGNITYDDENLSSNDVPDNCHFSIEEDLSQEDNNNNISPDDSFSEHDDESYISSELIELRSQANPAQIKAVVGCKICGKCFSRKCNLYRHLTNKHHIAKDDISADDYEKFTSNDVPSNYRKPRVKRKSAEELDELISQWKSSLECVNCSETYPSFTRLQEHFLERHTKERCYISCCNSKFTSRYEISEHARVHFVRDIFVCTFCGEGLRGKSNLKRHMQDKHHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01231910;
- 90% Identity
- iTF_01231910;
- 80% Identity
- iTF_01231910;