Pdom008678.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- lola
- Assembly
- GCA_947397865.1
- Location
- OX377622.1:127383220-127385544[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-11 1.3e-07 33.0 0.0 3 45 426 468 424 468 0.90 2 2 4.6 1.8e+04 -2.7 0.9 4 20 563 578 563 578 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGCCCACCACCTAGCAACCCCGCCAACGCCTCCTCCTCCTCCTCGGCCTGCAATGGCCCACCCGAGGGTCAAACATATTGCCTGCGCTGGAATAATCACAAATCGAATTTGGTGGAGATTTTAGATGTGCTCATCAAGGTCGAAAGTTATGTGGACTGCACCATTGTGGTCGACGATCAGGTGCAATTCAAGGCCCATCGTGTGGTGCTCGCCGCCAATTCACCCTACTTCCAGTCCATACTGCAAGATATGCCCATGGATCATTGCAGCATTATATTCCCCGGTGTCAAGGCCTTCGAAATGCGCGCCCTCCTCGAGTACATGTACACGGGAGAGGTGAATGTCACCCAGAGCCAAATACCGAAAATAATGCGCATTGCCGAGGAGTTAGAGGTCAAGGGTTTGTTCGATATGGCCGATTTGAAGGAGAAATTCCACAAGCTGAGCGAAGAACATGCCGAAAGATCGGCCAATAATCCTTATGCCAGCACTTCAGCACCCGCCAATCCTTATTCTTCGGTCACTACCTCATCCTCGACTCCTCAGAATGGCACAAAGCACAATGACGCGGAGAACAACTATCACAACAACTCCTCCTCAGTGATCTCGACCTCATCGAATATTTCGCCCTCGGCCGCCCCCTCCAGTAGTTCATCGCCGCCCTACAACAACTACAAATCTCCCTATGCCAGTTTGTACACGAAATCTCCCGGTCCCAATTCCAATCAAACGAATGCCGTCAATGCTCAATCCACTCAACAGACTCCCACACACCATGTCTCGGCCGATCGTTCGGGTCAATGGCCTATGTCACCTTCGGCTGCGGCCGCCGCTGCCATGTTGAGTTCGGTATATGAATCTGCTCCCGATATGAATCCTCTGAAACGCAAAAAGCTCTCGTCGATCTCCAGCATGCTCATGAACCGTGACACACCCATTTTGCGCAATGTTTTGGCTCAAGCCAACCCCGCCGACTCCTCGCAACCCATGCCCCTCATGATACCAGGCTCTGGCAGCAACGGCAAAGGCGACAAATCATCATCGGCAGCCAGCAGTTTGGACAAGAGTGGTGGCCACAACAATAATCACAGTTTCAATGGATCCGACTACAGCAGTGATAAGCAAAAATACCAAGATGAACCTCACTCTCCCTACACCGATCGCTCCTTCGAAGATGATGGTTTCGATACCAAAGGCAACTTCACCGGCAACTTCGCCAACAATCCCAATCAGAAGCCCGAATGGAAACGCTACAAGCAATACACCCGCAACGACATCATGTCCGCCATTCAGTGTGTACGCGATGGCATGAGCGCTTTACAGGCTTCCCGCAAATTCGGTGTACCCTCTCGCACTCTCTACGATAAGGTGAAGAAGTTGGGCATTACTACTGGACGTCCCATGAACCGCACCATGAAGCGCAGTCCCAGTGCTGTTGAATCATCGGCCGCCTTCCCCTTTGCCCATGGCTATGGTCAGGCATCGGCAGCGGCTGCCATGCATGAGGCTGCTGTCCGTGAGGAGCGTGAAATGAAAGAACACCACAGAAATTCCGAACATCATCACATGCCACCCACCATTCCTCACCCGGCGGCCGCTTTGTTGGATCCAGCATTCCTGCAACAGGCCTTGGAGAATCGTGGTGGTGATATTGCGGGCCGTGAGGCTTTGCACGCCATGGCCTTGGCTGCTGCTGCTCATGCTGCGGCCAATCGTATGTCGACCAGTCCGGGACCTAATGGCAACGCTGTGCGTTCTCCCAGTCCCAGTAATTTCTCGTTGAAATATGGCAACATGCGTACGGCCGAACAAGAGTTCATGGAACGCCATGAACTGGAACGCGAACGAGAGAGAGAGCGTGAGCGTGAATTTGTGGAAAGAGAAAGGGAACGTGAACGTGAGCGCGAACGCGAGCGTGAGATGGAAAGAGATCATGAAAATGAACGCAGTGCCGCCGATGAACGTGAAGGCGAAGAGGACGATCAAGTAGAAGATCTGTCGGTGGCCCGCAAAGATGCTCACTCGCCTATGGAGGCGTCCAGAGCCAGACCCGAATCACCTTTCTCGCCAGACGTACCCAACAGCGACAATGAGAAATCGGTCATAATGACCACCAAATTGCCCGCCAACAGCAGCAGCGACGATTTCATTCACGAATCCAAAATGAAACGTGAGGTGATCATAGACGAGAGAGCCGACTGA
- Protein Sequence
- MGGPPPSNPANASSSSSACNGPPEGQTYCLRWNNHKSNLVEILDVLIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDMPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFHKLSEEHAERSANNPYASTSAPANPYSSVTTSSSTPQNGTKHNDAENNYHNNSSSVISTSSNISPSAAPSSSSSPPYNNYKSPYASLYTKSPGPNSNQTNAVNAQSTQQTPTHHVSADRSGQWPMSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQANPADSSQPMPLMIPGSGSNGKGDKSSSAASSLDKSGGHNNNHSFNGSDYSSDKQKYQDEPHSPYTDRSFEDDGFDTKGNFTGNFANNPNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSAVESSAAFPFAHGYGQASAAAAMHEAAVREEREMKEHHRNSEHHHMPPTIPHPAAALLDPAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPSNFSLKYGNMRTAEQEFMERHELEREREREREREFVEREREREREREREREMERDHENERSAADEREGEEDDQVEDLSVARKDAHSPMEASRARPESPFSPDVPNSDNEKSVIMTTKLPANSSSDDFIHESKMKREVIIDERAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019529;
- 90% Identity
- iTF_01231695;
- 80% Identity
- iTF_01231695;