Pdom045100.1
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- bab2
- Assembly
- GCA_947397865.1
- Location
- OX377621.1:20585999-20588126[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-18 3.9e-14 53.8 0.0 1 43 69 112 69 114 0.95
Sequence Information
- Coding Sequence
- ATGTCTATTTGTTTTTCTGTCTATTTTCAGGCTAAAATGATTGAAAGCGGACATCCTTGGATGGCTGGTGCAACAACGTCTTCGGTAACTGCAGACAGTTATCAGTATCAATTGCAGTCCATGTGGCAAAAATGTTGGAATACTAATCAGCAAAACCTTGTGCAACAATTGAGATTTCGTGAGCGCGGCCCATTAAAATCCTGGCGTCCGGAGGCCATGGCCGAAGCCATTTTCAGCGTACTCAAGGAGGGTCTATCGCTGTCGCAGGCGGCCCGCAAATACGACATCCCCTATCCGACATTTGTGCTGTACGCCAATCGGGTGCACAACATGTTGGGCCCGTCGCTGGATGGTGGCACCGATCCCAGGCCCAAGGCTCGTGGACGACCGCAGCGTATTCTGTTGGGCATGTGGCCGGAAGATTTGATACGTTCCGTCATCAAGGCGGTGGTGTTTAGGGATTATCGCGAGATCAAGGATGAGATGGGCGGTTTGCCGTTTGCCAACGGTCAGCCACATGCGGCTGCCATATTCGGCTCTTCTCCCGCTTCCGGTGCTTCTTCGGCCGCCAATGGCTACCACAGTGCCGCAAAGTTGGCAGCTCAAAATGCTGCTATCGGCCACCAGGATGCGCCCAGTCCTCTCTCATCGATGACGGAGAATTTACGCCGCCAGATTATGTCGCAACAACAGCAATCGCCCATAGCCCAGTCGATGAATATCTACAAAGCTCCGGCCTATGTGCAACGTTCGGAAATTGAAGATCCCCTGACGGCCGTTAGCGGCAAACAACATGGAACTGGTGTAGGTGTGGGCACAGGCGGCGTTGGTGTCGGTGTCAGTGGTGTGGCCGGCGATCGACGTGGTTCCGAGAACCTACCCGACTTGAGTGCTTTAGGTTTGATGGGCTTGCCCGGCCTGAATGTTATACCCACCAATACGGGTGCTCGCAACAATCACATGCATTCCAATGCGGCAGCCTTCAATCGAGATCTGGAACGTGAACGCGAGCGAGAGCGCAATCGTGAAAGGGATCGCGAGCATAGGGAAAGGGAGAGAGAACGAGATCGAGAACGCGAACGCGAGCGAGAACGTGAGCGTGAACGAGAGCGTGAACGTGAGCGAGAGCGGGAACGAGAGGCCATGCAGGCCCGCCAGTATGGCAATCAGTCTCGCGGTTCAGCCGGCTCCGACATGCACAAGGCCAGCGGCACATCGTCACCCTACCCCCAGATCAAAAACAAGGACCTCACCAACTATGCTTACAATAAACGCTTTCTGGACAACCTACCGCCCGGCATCGACTTCGAGGCCATAGCCAATGGTTTGCTGCAGAAGTCGACGGCCAACAAGAGTCCACGCTTCGAGGACTTCTTTCCCGGACCGGATATGAGCGAACTCATAGCGAATGCCGAAGCCGCCGCGGCCAGTGCGCCCTTTCCCGCCCAACGTGAGTACAATCTAATGAAAATCAAATTGGAACATCAGCCCGCAGAGGTGCAGCATGAGGATTGA
- Protein Sequence
- MSICFSVYFQAKMIESGHPWMAGATTSSVTADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEDLIRSVIKAVVFRDYREIKDEMGGLPFANGQPHAAAIFGSSPASGASSAANGYHSAAKLAAQNAAIGHQDAPSPLSSMTENLRRQIMSQQQQSPIAQSMNIYKAPAYVQRSEIEDPLTAVSGKQHGTGVGVGTGGVGVGVSGVAGDRRGSENLPDLSALGLMGLPGLNVIPTNTGARNNHMHSNAAAFNRDLERERERERNRERDREHRERERERDREREREREREREREREREREREREAMQARQYGNQSRGSAGSDMHKASGTSSPYPQIKNKDLTNYAYNKRFLDNLPPGIDFEAIANGLLQKSTANKSPRFEDFFPGPDMSELIANAEAAAASAPFPAQREYNLMKIKLEHQPAEVQHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679401;
- 90% Identity
- -
- 80% Identity
- -