Basic Information

Gene Symbol
JARID2
Assembly
GCA_947397865.1
Location
OX377621.1:57969127-57984433[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-22 3.2e-18 67.6 0.0 6 89 1955 2036 1950 2036 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCAAAAGACTCCAAGCGGAAGCGCAAGGAATCACCGCCACCAACACCACAGCAACAACAACAACAGCAGCAACAACAACAACAACAACAAACATCGACTACTGCTGTAGAGTCATCACCAGAAATGCCCAAAAGGACAAAAGTTCAAGCTCAGCGCAAATTTGCACAAGGACAGAGTGCACCGCAATCATCATATAGTGCTATTATTGCCGCATCGTCGTCATCGAACACAGGTCCCAGTACATCATCGGAGAGTCGTGAACCACCAACAGAGATATTGCCAAATAAGCGACCAAAGACCGAAGACTTCCTAACATTTCTCTGCTTTCGCGGGACGTCGGCATTGCCGCCACATTTGGATTTTCTAAATCAGGGAAAATCCAAAGATCCTGAAAGGCCTGTGAAGAAACCGCTGAAGACGGCAATAGTTAAAAAGAAAGGCAAAAAGGGTAGACCGGCCAAGAATGCCAAACAAAAACCAGAAGAGGCAAATTTGGAAGAGGAAGCAGCAGCACAGAAGACGGCTAATAAAGATGATTTTATCACAGAAGACAATAAAGCTGAAATACCTACTAACGAAGAGAAGGAGGAGGATGGAGAAGGAGCGACAGAAGCGGAAGAAATACCTTCATTTCCAGTGCGCAAGCGTGCCGAAGTTGTGGCCGATGGGAATCGTCGCAGTAATCGCAATACGGATGAAAAGTGCAATAATTCCGTGGATACGGGAAAACGAAGGTCCAACCGAGCCACCAAAGGTTCCAAACTGATGGTTGATCATCTGTCGGACGAAGAAGAGGACGAATACTTTTCGTTGCTCGATGAAAATAGTAAAACTGTTAATTCCGATGTTGATGCAAAGGACCGAAAATCCACAAAGACTTCATATCAAGTCGAGAGAAAATCGGAATCGCCTTCAAAAGAGAGTGAAACAACTACAAAGTCTCGAAAAGGAGGCAGATCATCCTCTACACTAAAGAAGAAGGAAGGCGATGATAAGGATACGTTGAGGACTGAAGCCAAGGAAAAGGCAGCAGTAAAACGGCCCCGGCAAAAAGAATCGCCTATTTTTATACCATCACCCGAGCCCTCTGGTCGTATGACTAGGCAACGAGCATTCTTTGAACCCGTTAAAGTACCACAACGCGATGACAACAAAGCAGATGCTGAAGATGCTGATGTTAAGAAAACAGATATTGAGGAGGAGACACAACAAAATACACAGTCAGATGAAAAAACAGAACCTATGGCTGAGGAGGTGGAGAAACCTTGCAACTCCAGAGAATCCTTAGCCCCGCCAGAAAATGACAAAAACAAACCGCAATTGAACGTTTTTGACTTCTCCTCCGACGATGAACAGCCCTTGGCCAAAACCATAAAACTTAAAAAGGCTGTAGCAAATAAGGTCAGTCCCAAAAAGGTAAATCAACGTTCAGGAAAAAAGTCAGCAGTTAAAAAACCACAGGATGAAACTAATGAAGAGACTGGTGACAACAATGTGGACAATGCTAAAGAAGAAAAAGAAGACGTTACACAACCAGCTGCAGAGGACACAAACAAGTCTAAAAGCAAGCGTTCGGGTAATGCAACTACTAATTCCAAGAACTCCAAAAAGAAAGAAGACGAAGAATTTACAAGTGCAGCTGACAAAGAATTAGCACCACCATCGCCGAAAAAATCAGTCAATTCACGACAAGGCCGCAAGAAGACAAAAGCGGAAAATGTAGACAAAGCAGAGGCCGAGGAGACAGCAGCCGAGGAAACCGCTGGCAGTCCTACACGCAACCAACGCCCTTCACGCAAAACAAAAGAAGCTGCGACTATTTATATGGGCATTATAGGCCAGCGCCTAAAACTGGCGGAAGATGAAGAGGACGATATATCTTTGAGTAGTTTTGATCGTCCAAATGTTCGTGAAATGGAAAAAATGGAAAACGAATTGAAACGTAACTCAGCCCCCTCAACGGAAAGTGTTGCTGCAGTATCACCTACACCAAAACAAATTAAACCAACAGAAGTACCAACCTCTGCGGACGCGGCCCCACAACCACCACCACCGCCACAGCCAGCAGTAATAGCTGTAACTGCAGCAGAAAAACCGACGACAGGGCGCAGAGGTCGGCCACCCAAAAATCCCAAAGTTCCACCACCACCAGCTAAACGTGAAATCGAAGGTATGCTGGTGAAGAAAGGCGTCATTGCCAAACTAACACAGTCGACGGAAAACTTGAACGAGGCCAAAGATATTAAAACAGAGCCCTCTAAAGCTGGCACCGAAGACGATGAAGACTTCTTGTTGAATGAGGAACTAAACGAAACTAAACGCAAATTGGAGAGGAGTTTTAGTGATTCCGATGATGAGCCCTTAGCCATAAAAGCTCATGTAGTGAAGCCAAATGAAAAAGATGGCGAAGACTCTCGTAAATCGACAGGCAATGCTGCAGAGTGTCCTCCTCTAAAAGTAATGCCAACGGTGATTCCTCCTGCAGTGACGGCGACGGCGACTGCACCTCTACCGGCATTGGCGATGCTACCGTTGGCAACAAAATCAACCGCTACGGCAACACCATCCACACCGCCTCCAGTCAGCAATACAATTGCACCAACCACAACATCTGCTTTGGGTACAACAGGTACAGTACCTTCACCACCTAATACATTTAGCATTTTACCGCCAGCACCCGTCACACCTACATCACAGTTACCCTTCAAAAGTATTGAAAAGAAGTCCCCAGTACCTACATCAAAAATATTGAATGTCCCGGCGACATATGGCATTCCTCCAGCCTCACCCACGGGAAATGTAGGCAGTTGTGGTTTAAATGCCAGTTTTGGTAAATCTCCAATGTATGTGCCCCAATCGCCAGTCCACTATCATTCTGCACATTCATCACAACAACAACAGCAGCAACAACAACACCAACAACAACAACAACATATACGGCCTACAACATCAAGTATTCCACAATTTCCATTACAGTGTCCAGTTAAGACTTCCACTCCAGTGGCACCTCCTTTAAATACCACTTCGGTGTCGACACATATGGCCACTCCTCCATTACAAATGCCGCCACAGTCGCCCATGAAATATCAAACTCCACCAACCACATATCCTCCACCAATCGAGGCCTATCCCTCGCCTAAAATAAATCCAAATTTCTTAACGCCCAAATTCGATCGTAATACCCTCTCAAGGCCTGGTCATCCAACAGGAAATAATATCACTTTCCCTTCGCCCTCGCCAGTGAAATTCGATATGTCCGGATCGAGTAGTGGCGTTCTAAAACACTCATCACTCTCAGCACCCAACATCACTATGAGTCCAAAAACATTGCTGTCGAGTAATACCAACTATATGAGCAATAATATTGGCGCTTCCACTTCAGCGATGTGTCAGTCCAGCAATGATCCATTGAAAGATGAAATCGGCAGCATACTAGCAGCCAATTTAATGCCCAGCAAAGAGGAGTCTGGTAAAATTTTTGGCATTGCCAGTGTAAGTTTAGCCCAAAGTTCGGGACCAGACAATACAAAGTGCTCCTTGGGTAAGTGTGGATCTATACATAAGCCCGTGTTGGGGCCAGTGGTGCCCACAGAAAGCTATATAGGAGATCAGCTATCGGGCAAAGAAAGGCGCAAGGCCAAAGTGAATATGACGCACGAGCAGATACACAAATGGCTAATAGAATGCTCTTCAAATCCCGATGAAATTCAAGATGATCTAGATGACGATTTCGATTCAGACTTGAGACCAAATAATTTCAGTTCCACACCACCTCCCACGCGTGACGACAAAGAAAGTACATCATTTAGTTCTTCGTCGAAAGCGACCAGAGATCTGGGCAAAAGTGAAAGCGCCTGGTCGGCGAAGGGACCTTCACTGAAGGCTACACCTGTGGTAGCATCCAGCAGCAGTGCTGTCAACAACCGCAAAGACGATCTCAAGACGATAATCGAACCGACAAGTCCTCAGGAAGATGAATTCGAAAAGAACTCGCCGGCAATGAATATGATCTTCGACAAAAATGTTGCGAATAAACTCTCCCCTGCACCGGCTAGCTTAGATGAAAAATTGACTCAATCAGACAAATCCGACAAAAAGAATGACAACAAGAAGTCCTCGAACAAGGACCCAGAAAAGGCCACTGCAAAGTCTCCGGGCAATGAAGTGAAACCAAACAAGACAATAGAACAGACGGCAGCCGCACCTCGGACTCCCCCTGCAACGCAGAAACAAATTTCAAACCAAAAATCAGCTACGCAGAAGAAGGCTGCCTCTTCGCCTGTTGCAGCGGCGCCAACCACCACGACCACGACCAGCACCAGCACTGCAAACAAACAAGGTCGTAAAAAACATGTAGCCGAGGAAACAGACGATAAACCTGTGAGCACCAAACCCAAAGATAGCACACCACCAGATGCAGAAGCAACAACTCCAAACTCAAATTCCGCCAATCGCACTCCGAAACGAACACCAGTTTACCAACAGAAGCAAACACCAAAACAGCAAAGCGCCGCAAGCACGGATCTTAAAATCTCAACCACAACAAGTCATAAGAGAGCAGCAGCAGCGACAGCAGCAACGACAACATCCTGTAACGCAGCTTTCTCAGTTGACAATGAAAAATCCATATACTCCTTTGACAAGGACGACGACGATGCACCAGTAGTAAAATCGGAGAAACCCTCAACGTATCGGCGTCAAAGTCGGCGTGACTCAAATATTGATAATGGTATTCACACGACACCTACCACAACTACCCAACGCACTCCACCAACAAAACCCAAACGAAATGCGGCTGCCGTTGCTGAAATTGCCAATAAGGAATTAGCCGGCGGCAATTCCCAAACTAGTTCGGTGTCATTGACACTAAGTCCCTCGGAAAAGAATAAATTAGTCAAGGTGAGCTTAGACGCTGATAGCAAACCAGGCAAATCGGCTAACACCAAGGCGAGTAAAGCCGCCGCCAAGAAAGCAGCTCTCGAAGCTAAAAAGAATAATAATAATGCAAATGATTCGGATTCCGGGGATGGGCATACCTTTTATATACCCTTGCAAGGTGTCGCTAGTGGTGGCGATGGCGAGGGAGGAATTCAAGGTGTGGCTGTTAAATTGGGACGCGAAGGACCCGATGGTCCCAATCAAAAAGTGATCATGCATGCCACTTTAGTGACCAAAGCTCAGATGAGATCCGATACTAAACCCTTGCCAGAATCGATGAATGTCTCCGATATTGTTAAGAATTTAATGCTAGGTGACAAAAAGGGATCTTCCAGTGGTGGGCCGTCTACTTCTGCTGCAGCGGCAGCGGCAGCCACCAGCTCGTCCGCAAATAGTCTGAAAAACGTTCCAATTGGCACAGTACAGCCACGATTTAAAGGGGATTCGGCGACTGCTCAAGGTCCATCTACATCAACCGCAGGCGGTGGTGCAGGTGGAGGTTTACAGCGTGTAAATTCCAATTCCTCACTATTTTCCGGATCTGTCAAATCGCGCAATGCCGCTGCTGCGGGTGCTTCAAATAGCGGCGGCGGCGGTGGTCCTGGTCAATTGACAAATAAAAAATTCAAAGATGACACACCCATCAAAATGTCCAATAATACGGCATTCCCACGCCACGACGATCCCACGCAAATGGTAGAAGCTCCTATTTTCCGACCCACAGAGAAAGAATTCGCCGATCCCATGGAGTTCATCGAACGCATCACACCCATAGCTGCACGTTTTGGCATTTGCAAAATCATACCGCCGGCATCCTTCAAGCCGGAGTGTCGCATAGCTGACGAAATGCGTTTCACTGCTTACAACCAGTATGTGCACAAGTTGTTGCATCGTTGGGGTCCCAGTGCTAAGGAATTGAGCGCCATCAAAAAGTACTTGGCCACACAGAGCATTGTCATGAATCATCCACCCTGGATTGGTGGCATGGAAGTAGATCTGCCACGCCTTTATCACACCGTGCAGGAACTGGGTGGTCTCAAAGAGGTCATCGAAAAGAAGAAATGGGCTCGAGTAGCCGAAGAAATGTGTATTCCAAAACTAGCGCAGGATCGTGTCACAAAATTGGACGACATCTATTGCAAGTATTTGCTGCCATATGATACGCTTTCGCCAGCTGAACGGCAGAAGCTATTCGACGAAGTGGAAGCTGACTGGGCGAAACGAGAGGCACGCGCCAGGCGTAACGCTGACCGCTTTGTCAACACGGAAAGTGTTTCGAACGAAGACGATGATGTGTCCTCGGAAAATGACGAAGAGGAATCCGAAGAGGAAGTCGATGGTGTTTCCATGGAGTGTATTGTCAAGGGCCGCAGTATGCCTTTAAGTCAATTCTTCCGTATTGCTCGAAATACAATGGCATTGTGGTTTAAGAACACCGAGCCAACGGTAAATGAGGTTGAGGCGGAGTTCTGGCGTCACGTAGCCGTCAGAGATAGTCATGTGTGTGTACATTCCGGTTCAATTGATTCCTCCGGTTGGGGCTTTGGTTTTCCTAGTCCAGGTCCCAAGGGAAAAGGTTCCAATTACGCTCGTCACCCCTGGAATCTGAAGGTGTTGACCAACAACCCGGGCTCCGTGTTACGTTCTTTGGGACCAGTTATGGGTGTAACAGTGCCCACTCTACATGTGGGCATGCTTTTTGCGGCCTGCTGTTGGTATCGCGATCCCCATGGATTGTCGTGGATTGAATATTTGCATACCGGTGCATCCAAATTGTGGTATGGCATACCCGACGATCAAAGTGCCAACTTTAGAGCAGCTCTCACTTCACTCATTCCCACGCACTGTCAAAACAAAACCATTTGGTTACCCTGTGATACTGTTATGGTACCTCCACATATGCTCACCGATCGTGGTGTTTCGCTGTGCCGTATCGAACAGAAACCCGGTGAATTCATAGTCGTTTTCCCACGAGCCTATACCTCAAGTTTAGCGACTGGTTATGTGGTATCCGAAAGTGTCTACTTTGCGACGACATCCTGGTTGGATTTGGCTAAAGATGACTTTAGAGATATCCACGATAGCTGTGAACCTGCAATGTTTTCACTGGAACAATTACTTTTTGCCTTGGGTTACGATCAACGTGTGACACCCGATGCAATGCAGCAAATGTTACCCATGTTGCAAGAAGTTTTCGAGAAGGAATCAGCCGCCAGAGAACAACTTAAGGCAACTGGTGTAACTTCTACGGAAAAAGTCACCAACGAAAAAGGTGGCAAAGGTAAAAAACAACAACAGCCTCCACACAAGTCCATTGAAAGTGAATGTGATTTTTGCCGTGCAAATCTTTATATTTCAATGGTGCGTACCGATGAAGGTAATGTATATTGTCTTCAACATGCCCTGAAAAATCTCAACAATGGCAATATACAAGCGAAACAGTGCAAACTTATATACGCCTATAACATCGAGGATGTCGAGACTCTCATTAAAAATCTTAAAGAAAGAATACAACAGAAACGTGCAGTTATTAGCAAAAAACAAAAATAG
Protein Sequence
MVVSKDSKRKRKESPPPTPQQQQQQQQQQQQQQTSTTAVESSPEMPKRTKVQAQRKFAQGQSAPQSSYSAIIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGTSALPPHLDFLNQGKSKDPERPVKKPLKTAIVKKKGKKGRPAKNAKQKPEEANLEEEAAAQKTANKDDFITEDNKAEIPTNEEKEEDGEGATEAEEIPSFPVRKRAEVVADGNRRSNRNTDEKCNNSVDTGKRRSNRATKGSKLMVDHLSDEEEDEYFSLLDENSKTVNSDVDAKDRKSTKTSYQVERKSESPSKESETTTKSRKGGRSSSTLKKKEGDDKDTLRTEAKEKAAVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPQRDDNKADAEDADVKKTDIEEETQQNTQSDEKTEPMAEEVEKPCNSRESLAPPENDKNKPQLNVFDFSSDDEQPLAKTIKLKKAVANKVSPKKVNQRSGKKSAVKKPQDETNEETGDNNVDNAKEEKEDVTQPAAEDTNKSKSKRSGNATTNSKNSKKKEDEEFTSAADKELAPPSPKKSVNSRQGRKKTKAENVDKAEAEETAAEETAGSPTRNQRPSRKTKEAATIYMGIIGQRLKLAEDEEDDISLSSFDRPNVREMEKMENELKRNSAPSTESVAAVSPTPKQIKPTEVPTSADAAPQPPPPPQPAVIAVTAAEKPTTGRRGRPPKNPKVPPPPAKREIEGMLVKKGVIAKLTQSTENLNEAKDIKTEPSKAGTEDDEDFLLNEELNETKRKLERSFSDSDDEPLAIKAHVVKPNEKDGEDSRKSTGNAAECPPLKVMPTVIPPAVTATATAPLPALAMLPLATKSTATATPSTPPPVSNTIAPTTTSALGTTGTVPSPPNTFSILPPAPVTPTSQLPFKSIEKKSPVPTSKILNVPATYGIPPASPTGNVGSCGLNASFGKSPMYVPQSPVHYHSAHSSQQQQQQQQHQQQQQHIRPTTSSIPQFPLQCPVKTSTPVAPPLNTTSVSTHMATPPLQMPPQSPMKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGHPTGNNITFPSPSPVKFDMSGSSSGVLKHSSLSAPNITMSPKTLLSSNTNYMSNNIGASTSAMCQSSNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCSLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFSSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVASSSSAVNNRKDDLKTIIEPTSPQEDEFEKNSPAMNMIFDKNVANKLSPAPASLDEKLTQSDKSDKKNDNKKSSNKDPEKATAKSPGNEVKPNKTIEQTAAAPRTPPATQKQISNQKSATQKKAASSPVAAAPTTTTTTSTSTANKQGRKKHVAEETDDKPVSTKPKDSTPPDAEATTPNSNSANRTPKRTPVYQQKQTPKQQSAASTDLKISTTTSHKRAAAATAATTTSCNAAFSVDNEKSIYSFDKDDDDAPVVKSEKPSTYRRQSRRDSNIDNGIHTTPTTTTQRTPPTKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKNKLVKVSLDADSKPGKSANTKASKAAAKKAALEAKKNNNNANDSDSGDGHTFYIPLQGVASGGDGEGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMRSDTKPLPESMNVSDIVKNLMLGDKKGSSSGGPSTSAAAAAAATSSSANSLKNVPIGTVQPRFKGDSATAQGPSTSTAGGGAGGGLQRVNSNSSLFSGSVKSRNAAAAGASNSGGGGGPGQLTNKKFKDDTPIKMSNNTAFPRHDDPTQMVEAPIFRPTEKEFADPMEFIERITPIAARFGICKIIPPASFKPECRIADEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEDDDVSSENDEEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVLTNNPGSVLRSLGPVMGVTVPTLHVGMLFAACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATTSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDAMQQMLPMLQEVFEKESAAREQLKATGVTSTEKVTNEKGGKGKKQQQPPHKSIESECDFCRANLYISMVRTDEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNIEDVETLIKNLKERIQQKRAVISKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-