Basic Information

Insect: Polia nebulosa
Gene Symbol: -
Assembly: GCA_951329385.1
Location: OX589615.1:3939303-3954338[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.14 1.8e+02 4.1 0.0 21 35 353 367 352 368 0.93

2 19 0.15 1.9e+02 4.1 0.0 21 35 394 408 393 409 0.93

3 19 0.046 57 5.7 0.0 21 35 435 449 434 450 0.93

4 19 0.15 1.9e+02 4.1 0.0 21 35 476 490 475 491 0.93

5 19 0.85 1.1e+03 1.6 0.0 21 36 533 548 532 549 0.93

6 19 0.14 1.8e+02 4.1 0.0 21 35 574 588 573 589 0.93

7 19 0.14 1.7e+02 4.2 0.0 21 35 615 629 614 630 0.93

8 19 0.76 9.5e+02 1.8 0.0 21 35 656 670 655 671 0.93

9 19 0.15 1.9e+02 4.1 0.0 21 35 697 711 696 712 0.93

10 19 0.12 1.6e+02 4.3 0.1 21 35 738 752 734 753 0.90

11 19 0.15 1.9e+02 4.1 0.0 21 35 779 793 778 794 0.93

12 19 0.15 1.9e+02 4.1 0.0 21 35 820 834 819 835 0.93

13 19 0.15 1.9e+02 4.1 0.0 21 35 861 875 860 876 0.93

14 19 0.15 1.9e+02 4.1 0.0 21 35 902 916 901 917 0.93

15 19 0.12 1.6e+02 4.3 0.1 21 35 943 957 939 958 0.90

16 19 0.15 1.9e+02 4.1 0.0 21 35 999 1013 998 1014 0.93

17 19 0.15 1.9e+02 4.1 0.0 21 35 1040 1054 1039 1055 0.93

18 19 0.15 1.9e+02 4.1 0.0 21 35 1081 1095 1080 1096 0.93

19 19 0.12 1.6e+02 4.3 0.1 21 35 1122 1136 1118 1137 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.14	1.8e+02	4.1	0.0	21	35	353	367	352	368	0.93
2	19	0.15	1.9e+02	4.1	0.0	21	35	394	408	393	409	0.93
3	19	0.046	57	5.7	0.0	21	35	435	449	434	450	0.93
4	19	0.15	1.9e+02	4.1	0.0	21	35	476	490	475	491	0.93
5	19	0.85	1.1e+03	1.6	0.0	21	36	533	548	532	549	0.93
6	19	0.14	1.8e+02	4.1	0.0	21	35	574	588	573	589	0.93
7	19	0.14	1.7e+02	4.2	0.0	21	35	615	629	614	630	0.93
8	19	0.76	9.5e+02	1.8	0.0	21	35	656	670	655	671	0.93
9	19	0.15	1.9e+02	4.1	0.0	21	35	697	711	696	712	0.93
10	19	0.12	1.6e+02	4.3	0.1	21	35	738	752	734	753	0.90
11	19	0.15	1.9e+02	4.1	0.0	21	35	779	793	778	794	0.93
12	19	0.15	1.9e+02	4.1	0.0	21	35	820	834	819	835	0.93
13	19	0.15	1.9e+02	4.1	0.0	21	35	861	875	860	876	0.93
14	19	0.15	1.9e+02	4.1	0.0	21	35	902	916	901	917	0.93
15	19	0.12	1.6e+02	4.3	0.1	21	35	943	957	939	958	0.90
16	19	0.15	1.9e+02	4.1	0.0	21	35	999	1013	998	1014	0.93
17	19	0.15	1.9e+02	4.1	0.0	21	35	1040	1054	1039	1055	0.93
18	19	0.15	1.9e+02	4.1	0.0	21	35	1081	1095	1080	1096	0.93
19	19	0.12	1.6e+02	4.3	0.1	21	35	1122	1136	1118	1137	0.90

Sequence Information

Coding Sequence: ATGACAATGTGTAGAACGTGTTTATCTAAAAACGATCTAAGACACATATTTACTGATATGAATCTTGTAAGTTTGCGCAGTAAACAGCTACATTTGGTTTGTGGTATCAAGATCGAGCCAGATGACGGTCTAACGCAGCTAATATGTGAGCCATGTTTAAATCTAGTCAATGGAGCCCTAAAATTACGAGAATCGAGTACAAAAGCTGAAGAAATActcaaaaaatcattaaaaactattaaaatcgaATCAGACCTCGTTGATAGCCAAATACCGCATCCATCTGAAGTATCAACTGGTCAAAATGTTACTATTAACAAACAGAAAAGTAGAATAGAAAAACAGAATTTAAACAAaggaataaaatgtaaaaaaatcaaGAGTAAACCTAAAAAACTTCACgatgaaattaaaaatgaattcaCAGCCAGAATAGAAGATTATGAGTCTAGTAATGACTCTGACTTCATGAACAACTGCTTGATTGAAGATTTACCTTCAATTCATAGTGAAAATGACACATCAATTTGTATAGAAGACTTGGAATCTAGCGACAGTTTAGACCAGGATTTTAAGACTATTGTTAAAAATGAATCAGATTTTAGTCAAATCAACTGGGATTTGAAAGAAAAGCAGTTATTGGAGAGGGAAAGGAAAAAACAGCTGTGTAAGGAACAAGATGCCAAGCTGTTGTCTCTGGCAGTGATACCGTATGACAATGAAGGCCCAATTAGATGCACTATATGTAGCAAGGAGATGAGAAACATGCAGAATTTCAAGTGCCACGCTAAAACACATTTTGAACCACAACACGCTTGTGAGGAATGTGGCAAGAAGTTCGTGAACCCCAGCCACATGCGGTATCACCAGCAGCGCGTGCATGGTCGGAGGAAACGCCTGGCTTGCGGCAAGTGTACCTACCGGGCGGTCGACCCGTTACAGCTACAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAATATGCCGACTATAAACTGAAGTATTTCGACTTTGGACTGAAACATCTTCATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACGTACCGGTTATAAACTGAAGCACTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACGTACCGGTTATAAACTGAAGCACTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGGAACTGAAACATCCCGCTTAGCGGTGATCAGTGTGGTAGTAAAACTGAAATATGCCGACTATAAACTGAAGCATTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCCGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGAAGCATTTCGAGTTTGGACTGAAACATCTTTTTTGCGGTGATCAGTATAACTATGAAACTGAAATATCCCGCTTATGGGTGATCAGTGTAGTAGTAAAACTGAAATATGCCGACTATAAACTGAAGTATTTCGACTTTGGACTGAAACATCTTCATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAGCATACCGACTATAAACTGAAACATTTTGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGTGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGAAACATTTTGACGTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACCATGAAACTGAAACATCCCGCTTACCGGTGATCAGTGTAGTAGTAAAACTGAAACGTACCGGTTATAAACTGAAGCACTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGACGCATTTCGACTTTGGAGTGAAACATCTTTATTGCGGTGATCAGTATAACTATGGAACTGAAACATCCCATCTAACGGTGATCAGTGTGGTAGTAAAACTGAAAAATGCCGACTATAAACTGAAGTATTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAGCATACCGACTATAAACTGAAACATTTTGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGAAACATTTTGACGTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACGTACCGGTTATAAACTGAAGCACTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGACGCATTTCGACTTTGGAGTGAAACATCTTTATTGCGGTGATCAGTATAACTATGGAACGGAAACATCCCATCTAACAGTGATCAGTGTGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAGCATACCGACTATAAACTGAAACATTTTGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGAAACATTTTGACGTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACGTACTGGTTATAAACTGAAGCACTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAACTATGAAACTGAAACATCCCGCTTAGCGGTGATCAGTGTAGTAGTAAAACTGAAACATACCGACTATAAACTGACGCATTTCGACTTTGGAGTGAAACATCTTTATTGCGGTGATCAGTATAACTATGGAACTGAAACATCCCATCTAACGGTGATCAGTGTGGTAATAAAACTGAAATATGCCGACTATAAACTGAAGCATTTCGACTTTGGACTGAAACATCTTTATTGCGGTGATCAGTATAGCTAG
Protein Sequence: MTMCRTCLSKNDLRHIFTDMNLVSLRSKQLHLVCGIKIEPDDGLTQLICEPCLNLVNGALKLRESSTKAEEILKKSLKTIKIESDLVDSQIPHPSEVSTGQNVTINKQKSRIEKQNLNKGIKCKKIKSKPKKLHDEIKNEFTARIEDYESSNDSDFMNNCLIEDLPSIHSENDTSICIEDLESSDSLDQDFKTIVKNESDFSQINWDLKEKQLLERERKKQLCKEQDAKLLSLAVIPYDNEGPIRCTICSKEMRNMQNFKCHAKTHFEPQHACEECGKKFVNPSHMRYHQQRVHGRRKRLACGKCTYRAVDPLQLQYNYETETSRLAVISVVVKLKYADYKLKYFDFGLKHLHCGDQYNYETETSRLAVISVVVKLKRTGYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKRTGYKLKHFDFGLKHLYCGDQYNYGTETSRLAVISVVVKLKYADYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVYNYETETSRLAVIRVVVKLKHTDYKLKHFEFGLKHLFCGDQYNYETEISRLWVISVVVKLKYADYKLKYFDFGLKHLHCGDQYNYETETSRLAVISVVVKLKHTDYKLKHFDFGLKHLYCGDQYNYETETSRLVVISVVVKLKHTDYKLKHFDVGLKHLYCGDQYNHETETSRLPVISVVVKLKRTGYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLTHFDFGVKHLYCGDQYNYGTETSHLTVISVVVKLKNADYKLKYFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLKHFDVGLKHLYCGDQYNYETETSRLAVISVVVKLKRTGYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLTHFDFGVKHLYCGDQYNYGTETSHLTVISVYNYETETSRLAVISVVVKLKHTDYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLKHFDVGLKHLYCGDQYNYETETSRLAVISVVVKLKRTGYKLKHFDFGLKHLYCGDQYNYETETSRLAVISVVVKLKHTDYKLTHFDFGVKHLYCGDQYNYGTETSHLTVISVVIKLKYADYKLKHFDFGLKHLYCGDQYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -