Pneb016682.1
Basic Information
- Insect
- Polia nebulosa
- Gene Symbol
- CSRNP3
- Assembly
- GCA_951329385.1
- Location
- OX589592.1:26028590-26030830[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.19 1.3e+04 -2.3 3.0 61 111 42 90 20 110 0.52 2 4 0.67 4.5e+04 -4.1 0.4 86 103 168 185 160 203 0.46 3 4 5.4e-103 3.6e-98 329.7 6.8 1 218 221 430 221 430 0.93 4 4 0.23 1.5e+04 -2.6 1.0 72 72 697 697 625 735 0.54
Sequence Information
- Coding Sequence
- atggagaacgcaatatCAGAATTAGGCGTGCAGCCACCACAGCAGCTCGATAAGGATGTAACTGATTGTGATAAAGACCTAGTTGGAGAACATAGGGAAGAAGATGGCTTCCTTGTGATGAAAGACGAAAAAAACAGTGACAGTGATGCTCACAGTGAAGATCTTAGCTCTAATGATGAACAAAGTAATGTTATCAGTAGTAGCAACTCTCAGTTTTATGAGAGCAGTGACAGTAAAATAGACTATGCGGTAAAAATAGATGACAATGATACTCTAAGTGACATAGACGATATCAAAACGGACAGTGCTTCAGCTGACAGTGAAGACTCTGCTCTCGGTAGTCTTCCGCCGGATAGTGCTCTCAATGATAGGGAAGAAGACGCCCAAGATCGGTCAGAAGGTAGTGACTCAGGTCTTGGATCAGAAGTTATTTTAGACGATGTAAAAATACCAAGCTTCAATCTTGCTCTTCCATGCACAAGTAgcctaaaaagtgacaaatcaTCAGATGATTTAGACCACGATAATGATAACTCCAGTAATAGTAGTATCGAGAACAATAAAGATAATGGCCATAATCCCATAGCACAAGTGAAGCCTCTCAGAAGTAGTCTTAAGAGAAAATGTAGTGATGCTAACAAGAATGAGCCACTACCTAAAAAGCGGAAAGAAAGTATAAAATTCGATAATGTTACAGTATTTTACTTTCCTAGAGCCCAAGGATTTTCATGTGTTCCATCACAAGGAGGCTCAACGTTAGGAATGGAATGGGAACATACTCATTTACAAAACTTTACTTTAGCCGAGCATGCCTTAGAGCAGAGAAGATTGCATAGACAAATATTGCAGCAGCTGAAGAGTGAGCGAAATTCGTTACAAGGTGTGTCACTTTCTTCTAGTGAAGATAGTGATACTGAAGAAGAAGCAAGCGACATTTCTGAATCGGAGCTAGATTTGGACAGCTACTTTTTCTTACAACCTGTCCCAACCAGGCAAAGAAGAGCTCTATTACGTGCAGCCGGAGTGAGAAAGATAGAGGGCTATGAAAAGGATGAATGTAGGGATATAAGAACATCGCGAGAATTCTGCGGTTGCGCTTGTAAGGGAACTTGTAACCCAGAAACTTGTTCGTGCAGCTTAGCTGGGATAAAATGCCAAGTTGATCGGTTGAACTTCCCCTGTGGATGCACTAGAGATGGGTGCGCTAACACAACGGGCCGAATAGAATTTAACCCCGTAAGAGTGAGGACGCATTTTATTCAGACTCTTATGAGAATAGGTCTCGAAAAGAAAAATGAAGAGAATCAGGAAGCTGCTAAGAGGCAATGGCTCGAGGCGCACAATAATTCCACATCATGTTCATCAAATTCATCATACGAAAGAGAGCGTTGTCTGAGTCATGAAGATGGAATGTTACGTGATGTTAACCTTACTCCAAGAGTGGAAGTAGAATCTTGCGTCAATACGGGAAGTTTTAATAATGTTCATTGTGATATGAATAATTCCACATCACAGAATAGCGACATGTCATACGGCTATAGAAACGAGGTTTCCAATCACAATAACGTAAATGACAGTGGTATCATGCACTTTGAGAATGCCAACAATCATCACAGCCACAGTGACCCTTACACATCCAGCATACTTCAAGGAAAGGGACCTCCTTACGGATCAGCCAACGTTATGGGTTTTGATACTATGTCAAATAACATACAACGGTTTCCTTGCGATCTTAACTACGCTTACGAGCAGCAAACAGAACACCATTTCAAAGGCTTGCAAAGCTTCTCCGCCACCAGTTTTGAGGAGTTTGCCCACAGCTCCCAGATGACTATGTTTAGTCATTACGGGCATGTTTATGTACCAGATTACTTGCATAAATCAACTACAGTCCACGACCACAGTTCGCTACAATATCATAGTGCACCACATAATCACTATGGAATGTACAAAAATAGTTCTGATTGTGTGAATAATGACAACAAAAGTGATACTCATTATACTACTTTGATGACATTGCCATATCAACATAGTAATAAGATGCAAACTGTAGACAATGATGAGAACTGGTTCAGTCACAATACGCTGCTGAACTTGGACCATTCGGACCAGACGACGCAGGACGCGTCCGACTCGCAGTCCCAGGCCGCGGGGACAGCAACAGAAAGCAATAACGCCGAGACTACGGAAAATTTTGGtgaacttattaaaaaaactatgGTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MENAISELGVQPPQQLDKDVTDCDKDLVGEHREEDGFLVMKDEKNSDSDAHSEDLSSNDEQSNVISSSNSQFYESSDSKIDYAVKIDDNDTLSDIDDIKTDSASADSEDSALGSLPPDSALNDREEDAQDRSEGSDSGLGSEVILDDVKIPSFNLALPCTSSLKSDKSSDDLDHDNDNSSNSSIENNKDNGHNPIAQVKPLRSSLKRKCSDANKNEPLPKKRKESIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHLQNFTLAEHALEQRRLHRQILQQLKSERNSLQGVSLSSSEDSDTEEEASDISESELDLDSYFFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGTCNPETCSCSLAGIKCQVDRLNFPCGCTRDGCANTTGRIEFNPVRVRTHFIQTLMRIGLEKKNEENQEAAKRQWLEAHNNSTSCSSNSSYERERCLSHEDGMLRDVNLTPRVEVESCVNTGSFNNVHCDMNNSTSQNSDMSYGYRNEVSNHNNVNDSGIMHFENANNHHSHSDPYTSSILQGKGPPYGSANVMGFDTMSNNIQRFPCDLNYAYEQQTEHHFKGLQSFSATSFEEFAHSSQMTMFSHYGHVYVPDYLHKSTTVHDHSSLQYHSAPHNHYGMYKNSSDCVNNDNKSDTHYTTLMTLPYQHSNKMQTVDNDENWFSHNTLLNLDHSDQTTQDASDSQSQAAGTATESNNAETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040832;
- 90% Identity
- iTF_00122412;
- 80% Identity
- -