Basic Information

Insect: Polia nebulosa
Gene Symbol: jarid2b
Assembly: GCA_951329385.1
Location: OX589587.1:4803781-4825088[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.4e-17 1.4e-13 52.9 0.1 7 89 479 555 474 555 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.4e-17	1.4e-13	52.9	0.1	7	89	479	555	474	555	0.91

Sequence Information

Coding Sequence: ATGTCCTTGCGGTCACAACGATTAAGTAAGCTAGTATTGAAAGGTATTATACCACCGAATCGTACTCTTAAAAGAAAGACAGCTTCAAAACGAAAAAATACTTCTTCTGACGAGGATGATGAACCTCTAATATTTCAAAAGACTCGCAAAAGTAGTAGTAAAACTCCTACTGCTGTCGGTGCGACAACTTCCAAACCGAAATCGCTCAAAATCTCCGAGGTATCACGCAGAACCAAAGAATTCGCTGCAAGATCAAATTCGCTCGCCGCAGGTGATCCGTTCGCCCCAGATAACAACAAGCCCGTCCCGGTTCGTCAGGTATTGGAAATCTATCCCGAAAACTTTAGCGATACGTCGGACTGGGCTATAACTGCAGAAGAATCCGATAGAATGAATCGAGCCTTAGACGATGATTCATCCGATTTGTGGTATTATAACAGTGATAGTGGGCAGTTTGATAAAATGCAGGTCGTAGTAGTTCCGATGGGAGACACAGATGAACATCGAAATCACGATTCTCTAGATGATTTACCGGCTCTGATATATGATGATAGCTCTCAAGACGACGAACCGTTAGTGCGGGGACGGGATACACTCGTGGACGAGGATGTACGAAGCAAAGATAACAATCAACGTAACGATTCTTCAGAACCTGGGCCAAGTGGTCTGCAAAGCAGAAAAGACACCAATCAAGAATCCGATGACAACAGTGATTATAAACTGAAGTGTAGCTCAAAGACGAGCTCTAATAGTAACAACATTGCTGGGCAAAAAAAGTCACCGCGCGGTCGGTCTGACAAAAAAGTAACAAGTTATCAAAGATTCGCTGCCAAGAAAAGACTGTCAGCTGATACGGACGCGCTGGTGGAACGCCTCAAAAAAGAACGAGAAAATGCTATGCAGTTTGTCGAGGACCAAAAACAAATCCAAATAGCACGGATTATAGCGGCGAAGAAAGATAATTATCAGGTGGATCTAGCCCGCATAGAACAGCGCTATGCAGAAGCGATTGAAGAAAGAGAATCGTATTATGTTCGCTGCGAGAAGGgcataagaaaacaaaaagagACTGAACGCCGTCTGTTCGAAGAAGTAGATACCATGGCTAAGACCCTAAGCAAAGAAAAAGATGCCAAGTGCATGCACCCGATACCTACAAATAAGGGTGCGGAACAGCCTGGCACCAGCGAATCATCAACAGAACGGTTGCTTCTGAAAGCGCCCGTTTTCTTCCCTAAAGACGAAgattttagtGATCCCGTCCACTTTTATGAACAGATTTACAATGAAGTTCTTAAATTCGGGGTATGTAAAGTGGTGCCGCCTGCTGGTTGGAAGCCACCTTTTACAGTGCACGCCGACACCAAATACGACGTGTCAAACCAGTACATTTCGCGCCTATTCAACCGCTGGGGGGCAGCTGCGAGAGAGCTCAGTGCCATCAAACTATGCCTCCAAGAACAAAACATCCCCTTCACAAACCCACCACGATTTCATGGTGTAGAGGTTAATCTGAGCAAACTATACCACGTGGTTAAGAGGTACGGTGGTCTCGAAGCAGTTATCAATAAGAAGAGGTGGGGAAAGGTGGCAGAAGATATGAAACTTGGGACTTATGAGAAAAGACTAGAAGTGCAATATATGAGGTTTTTGTTACCATATGAAACTCTTACAGATCTGGAGCGACAGGAGATAATACACCGAGTTGAAGTAGCATGGAACAAGAAAAATCAAAAGCTTACTTACCGGGCCATGAACCCGCTTTACCGTCAGAAGCGAATGCTTGGATTAATGGATTCATCTGATGAGGAGACGGAAGATGCAGACGCAAATGCTGCTCTGAAGCAGGCAGAAGACTGCATCGTGAAGGGTGAATATATGGCACACCCTAAATTTAAAAAGATCGCGTCCTTGGCATACGAGAACACGTTCGGGCCTGGTTCGCTGGGGGATTACCCGCCCCCGCTGAAGGAGATCGAGGAGCTGTACTGGAAACTGGTGACGTCGTCCACCGAAAACGCGTGCGTGCACACCGCGTTCGTCGACACCCGCCCACTTTCCCAGGGCTTTACTACGAGTGAGGAGCCGTATGCTAGCCATCCCTGGAACCCCAAGCAACTGATGAACAATACTCGCAACGTGCTTCGGTATTTGGGTCCCGTGGTGGGTTTTACAGTGCCCACTCTGCTTCTGAGCATGCTGTTCTCCACCTCCTGTTGGCACAAGGATCCTCATGCAGTAGCCTGGTCTGAGTACCAGAGCGTGGGACCCCCCAGAATTTGGTATGGGATCCCCGCGAGCCAGGCAGATAACTTCAGAAGGGCTGTTGAGACCCTGAGCCCGACATCATGCCAGAACAAATCTCTATGGCTGTCTTCGGATATCACCATGATCCCACCGAGCGTGCTGCTCGACCACAACGTGAGCCTGTCGTACGTGACGCAGAACGAGAACGAGTTCATCTTCACCTTACCTAACGCCTACTCCTGCTGCATCAGTACCGGCTATACCGAGTCCGAGAGCGTGTACTTCGCGTCGCCCTTGTGGCTTGAGTGCCTGTGGGGTGTGTTCCAGGAAGCGCGTCAGAGTTGCGAGCCGACTGTGTTCTCCATGGAGCATCTGCTGTACAACATCGGGCGCGACACCGATCCCGAGCTGGACATTCTGAGTCGCGCGCTGCCGCTGTACGACAGGATGGTACGCACGGAGGTCATCAACAGGCAGATGCTGCAGGAGCGAGGCCTGAAATTGGTGCCGAAGCTGCTGAGCGCACGGAAAAACAAACGACCAACATCGATGACGAGCCATCAAGAGGAGTGCGATTACTGCAGGGCAACGCTGTTCCTCTCCAAGGTAAAGGGTATGCCCGCCAAGAACTCGGTTCTGTGTCTCGAGCACACGCTGTTGCTGCTAGACTCGAATCGTTACAAGAATACGGACTTGAAACAGCTGCAGGTGCTGGTTTACGTCAGTGTAACGGAGCTACAAAACATGTACTCCGATATGGAACGCCGCCTGGTCGTAGTAAGAGCTAAGCACGAGTCGAATCAAAAgtcaaaaaagaacaaaaacagTATATAA
Protein Sequence: MSLRSQRLSKLVLKGIIPPNRTLKRKTASKRKNTSSDEDDEPLIFQKTRKSSSKTPTAVGATTSKPKSLKISEVSRRTKEFAARSNSLAAGDPFAPDNNKPVPVRQVLEIYPENFSDTSDWAITAEESDRMNRALDDDSSDLWYYNSDSGQFDKMQVVVVPMGDTDEHRNHDSLDDLPALIYDDSSQDDEPLVRGRDTLVDEDVRSKDNNQRNDSSEPGPSGLQSRKDTNQESDDNSDYKLKCSSKTSSNSNNIAGQKKSPRGRSDKKVTSYQRFAAKKRLSADTDALVERLKKERENAMQFVEDQKQIQIARIIAAKKDNYQVDLARIEQRYAEAIEERESYYVRCEKGIRKQKETERRLFEEVDTMAKTLSKEKDAKCMHPIPTNKGAEQPGTSESSTERLLLKAPVFFPKDEDFSDPVHFYEQIYNEVLKFGVCKVVPPAGWKPPFTVHADTKYDVSNQYISRLFNRWGAAARELSAIKLCLQEQNIPFTNPPRFHGVEVNLSKLYHVVKRYGGLEAVINKKRWGKVAEDMKLGTYEKRLEVQYMRFLLPYETLTDLERQEIIHRVEVAWNKKNQKLTYRAMNPLYRQKRMLGLMDSSDEETEDADANAALKQAEDCIVKGEYMAHPKFKKIASLAYENTFGPGSLGDYPPPLKEIEELYWKLVTSSTENACVHTAFVDTRPLSQGFTTSEEPYASHPWNPKQLMNNTRNVLRYLGPVVGFTVPTLLLSMLFSTSCWHKDPHAVAWSEYQSVGPPRIWYGIPASQADNFRRAVETLSPTSCQNKSLWLSSDITMIPPSVLLDHNVSLSYVTQNENEFIFTLPNAYSCCISTGYTESESVYFASPLWLECLWGVFQEARQSCEPTVFSMEHLLYNIGRDTDPELDILSRALPLYDRMVRTEVINRQMLQERGLKLVPKLLSARKNKRPTSMTSHQEECDYCRATLFLSKVKGMPAKNSVLCLEHTLLLLDSNRYKNTDLKQLQVLVYVSVTELQNMYSDMERRLVVVRAKHESNQKSKKNKNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -