Basic Information

Insect: Pogonus chalceus
Gene Symbol: stc
Assembly: GCA_002278615.1
Location: NEEE01003083.1:52085-57476[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 2.2e+04 -4.2 1.6 15 19 464 468 463 468 0.81

2 13 0.11 8e+02 0.5 0.4 4 10 497 503 496 503 0.95

3 13 1.1e-06 0.0078 16.5 13.0 3 18 513 528 512 529 0.94

4 13 2.4e-07 0.0017 18.6 12.2 1 18 565 582 565 583 0.97

5 13 1.1 7.7e+03 -2.7 1.0 6 10 613 617 612 617 0.90

6 13 4.3e-08 0.00031 20.9 11.9 1 18 623 640 623 641 0.95

7 13 0.00016 1.2 9.5 6.6 1 11 688 698 688 700 0.97

8 13 2 1.5e+04 -3.6 0.8 4 10 703 709 702 709 0.72

9 13 6e-10 4.3e-06 26.9 10.5 1 19 715 733 715 733 0.98

10 13 3 2.2e+04 -4.3 0.8 6 10 762 766 762 766 0.89

11 13 2.7 1.9e+04 -4.0 9.6 10 19 780 790 769 790 0.88

12 13 3e-07 0.0022 18.2 14.3 1 15 826 840 826 851 0.94

13 13 0.024 1.7e+02 2.6 15.8 1 19 858 877 858 877 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	2.2e+04	-4.2	1.6	15	19	464	468	463	468	0.81
2	13	0.11	8e+02	0.5	0.4	4	10	497	503	496	503	0.95
3	13	1.1e-06	0.0078	16.5	13.0	3	18	513	528	512	529	0.94
4	13	2.4e-07	0.0017	18.6	12.2	1	18	565	582	565	583	0.97
5	13	1.1	7.7e+03	-2.7	1.0	6	10	613	617	612	617	0.90
6	13	4.3e-08	0.00031	20.9	11.9	1	18	623	640	623	641	0.95
7	13	0.00016	1.2	9.5	6.6	1	11	688	698	688	700	0.97
8	13	2	1.5e+04	-3.6	0.8	4	10	703	709	702	709	0.72
9	13	6e-10	4.3e-06	26.9	10.5	1	19	715	733	715	733	0.98
10	13	3	2.2e+04	-4.3	0.8	6	10	762	766	762	766	0.89
11	13	2.7	1.9e+04	-4.0	9.6	10	19	780	790	769	790	0.88
12	13	3e-07	0.0022	18.2	14.3	1	15	826	840	826	851	0.94
13	13	0.024	1.7e+02	2.6	15.8	1	19	858	877	858	877	0.97

Sequence Information

Coding Sequence: ATGGCCCAGTGGAATCCATATTACGGTGTTCCAACCCAAAATGATTCTGTGTACGAGGAACAAAATATGAgttcacaaaattattttggtgTACCACCAGTTCCATATGGATCTGTACCAGTTCctcaaatgaattataataattactttgttccaaataatatttattccaattttgGTTCAAATTTGCCTGGTACGATTTATAATGTACATGAATTGGAAGCACAGCAATTTGCTTCATACGTTCAAAATTCCAATTCAACAGGTGCGgctgtaacaaaaaataataaatatgaaaacaaaaatgatgCAACCAAAGGTCCAGATATTCCAATATCTACATCAAAGTTAACTGCTACCGCAGCTGAATTTAAACCAGGCCCTTCAAATGAAACACAAATTAATAGTCAAacgttttatagtaaaaacgataataaaataaatacaggaGCAATacgtaaaaatacttttgaacCTCCTGAAACAACATCTTCAACAAACAATGAAACTAACAGAACagttaaaactgaaataaaatcaaataaaaagccCGACAATCGTCggtcatataataaaaacactcCAACTCATAATTATAAcaacgataaatttaaatataacaaacaagAACGtactacttataataaaaatttcaaaaaagatgaaattagaaattttaagaaaactgatgcaaattttgaaagtactgacgtaaaatataatcatcgTCAGAATGATTATAaacctgaaaataaatacaataaatacgataataatttcaaacaggataataaatataaatacgatgatagagaaaattttaatcgaCATTTTCGGCGCAATGATCGTGATACAAGAactaatgattttaatgaaaaaagtaaTCGGCCGAATAGTTATTCATACTCAAAGTCAGATACTAgattcaataaatatgatacaaGGGAGTcgaattataatagaaatcaTAGAGATTATTCTGAGAAAAATTCGTATAATCGTGATAATCGATCAAATAGCAATAATTCATATCGTAATCAGAGGTATGATAGAACTTATGAGAATTGGCGCAGTGGGCCGTCTACTTCtcaaaaggaaaataaaaatgagaatTCTAGTAAGGAAAAAACTGATGCTCCTAGTTTCAAATCGtttgaaaatagaaaacaaccatataagcaatttaaaaaatTACCTGACGATGATATCTCACAAAGAGATCGTTTAACTGAACAAGTAAATAAAGGAAACTTAGAATGTTTAGTTTGTTGTGATAGAGTTAGACAAACTGATAAAATATGGCATTGCCAAAAATGTTatcatatatttcattttcgttGTATTAGCAAATGGGGAAATACATCCAAAGAtgataaaaacgGCTGGCGTTGTCCAGCTTGTCAGCATGTTACAAATGAGATCCCATCAACTTCTTATTGTTATTGTGGTAAAGTAAGCGATCCACAATTTAATCCGAGCGATACTGCTCATAGTTGTGGAGAAGTTTGCGCTCGGGTTGGTGTTAAACCAGATTGTATCCAtcgttgtaatttattatgccATCCAGGGCCTTGTCCAAAATGCGAAGCATTaatttcaaaGAAATGTAATTGTGGGGCAACAACTCAAATGGTAGTCTGTAGTGCTGATACAATTTTAGTTTGTActtcaatttgtaataaaaaattaaattgcggAGTTCATCATTGCGATAAAATATGTCATTCGGGTGATTGTAATGAATGTTTAGAAACAATTCATCaagaatgttATTGCGGAAAATCAAATCGTACAATTCCTTGTAATATAGAACAAAAAGACGTTTTGAATTATAGTTGCGAAGAAATTTGCGATCGCGTTTTAAAATGCGATAATCACAATTGTAAGGAAATATGCCACCCAGGAGATTGCCCTACATGTGTTAAATCTCCAGATCAAGTTAAATCGTGTCCATGCGGTAAAACTAAACTGGATATTGTAAGGACGTCTTGTTTGGATCCAATCCCGTGTTGTGGAAAAGTAAATATGATGTTNGAGAAAAAATGTACCAAGaaaCGATCATGCGGGCGTCACAAATGCAATCAATTATGTTGTATTGATATCGATCATGTTTGTCCATTACCATGTAATCATATGTTAACATGTGGATTACATCGATGTGAAAAAACATGCCACAAAGGTCGATGTCTACCATGCTGGAGAATAAGTTTTGAAGAACTTTATTGTGAATGCGGAGCTAGTGTTATTTATCCCCCAGTTCCTTGCGGAACTAAACGTCCACTTTGTAACCGCCCGTGTTCTCGCCAACATGACTGCGATCATGACACTTTACATAATTGTCATAGTCAGCCTGAATGTCCCCCATGTACAGTTTTAACTACGAAATGGTGTTTTGGTGGTCATGAGcAACGTAAAACAATTCCGTGTCACCAAAAAGAGTTTTCTTGTGGACTACCTTGTGGAAAAGATTTACCGTGTGGCCGACATAAATGCCAACTACCTTGTCATAAAGGGCCTTGTTTAAAAGAAGGACAAATTTGTACACAATCTTGTACTGTCGTTCGAGAAGCTTGTGGACATCCTTGTGGTTTACCATGCCATGAAATGCCATGTCCTGACTCTCCGTGCAAAGAATCAGTTAAAGTAACATGCGAATGCGGTTTAAGATCATCCACCCGTGCATGTATAGACATGACTGGAGAATATCAACGTATTGCTACATCAATGTTAGCGTCAAAAATGGCGGACATGCAATTAGGTCATTCAATTGATATTGGCGATATTATTGGAACCACCGCTAGGAAACAAACCCTTAAAACATTGGAATGCAACGACGAATGCCGCTTAATTGAACGAAATCGACGTTTAGCGATCGGTCTTCAAATTCGAAATCCTGATTTAAGTGCCAAATTAACTCCGCGTTATTCGGATTTCATGCGACAATGGACCAAAAAAGATCAATCGTTTTGTCAAACGGTTCATGATAAACTTACGGAGTTAGTTCAACTAGCGAAACaaTCGAAACAAAAATCGCGGAGTTATTCATTTCCGTCGATGAATAGAGAAAAACGACAATTTATACATGAATATTGTGAACATTTCGGTTGTGAAAGCGCTGCTTATGATCAGGAACCTAATCGCAATGTTGTTGCTACAGCTTCGAaagataaaGCATGGCTTCCAAGCTGCAGTCTATTAGAACTAATTCAACGTGAAAGCGGTCAAAGAAAAGTGCCTGGTCCAATATTAAATCGTCCATTAGGTATCTCGAAAAATTCTGATACCGTTTCGTTAAAAGTTACATCTAAACCATCATCAACAACAATACAATCTACCTCATTTGCAAGTACCTTGCAACAGCAAAAATCAACTGAATctgaaatagattattttaatttcccaccaaataaataa
Protein Sequence: MAQWNPYYGVPTQNDSVYEEQNMSSQNYFGVPPVPYGSVPVPQMNYNNYFVPNNIYSNFGSNLPGTIYNVHELEAQQFASYVQNSNSTGAAVTKNNKYENKNDATKGPDIPISTSKLTATAAEFKPGPSNETQINSQTFYSKNDNKINTGAIRKNTFEPPETTSSTNNETNRTVKTEIKSNKKPDNRRSYNKNTPTHNYNNDKFKYNKQERTTYNKNFKKDEIRNFKKTDANFESTDVKYNHRQNDYKPENKYNKYDNNFKQDNKYKYDDRENFNRHFRRNDRDTRTNDFNEKSNRPNSYSYSKSDTRFNKYDTRESNYNRNHRDYSEKNSYNRDNRSNSNNSYRNQRYDRTYENWRSGPSTSQKENKNENSSKEKTDAPSFKSFENRKQPYKQFKKLPDDDISQRDRLTEQVNKGNLECLVCCDRVRQTDKIWHCQKCYHIFHFRCISKWGNTSKDDKNGWRCPACQHVTNEIPSTSYCYCGKVSDPQFNPSDTAHSCGEVCARVGVKPDCIHRCNLLCHPGPCPKCEALISKKCNCGATTQMVVCSADTILVCTSICNKKLNCGVHHCDKICHSGDCNECLETIHQECYCGKSNRTIPCNIEQKDVLNYSCEEICDRVLKCDNHNCKEICHPGDCPTCVKSPDQVKSCPCGKTKLDIVRTSCLDPIPCCGKVNMMXEKKCTKKRSCGRHKCNQLCCIDIDHVCPLPCNHMLTCGLHRCEKTCHKGRCLPCWRISFEELYCECGASVIYPPVPCGTKRPLCNRPCSRQHDCDHDTLHNCHSQPECPPCTVLTTKWCFGGHEQRKTIPCHQKEFSCGLPCGKDLPCGRHKCQLPCHKGPCLKEGQICTQSCTVVREACGHPCGLPCHEMPCPDSPCKESVKVTCECGLRSSTRACIDMTGEYQRIATSMLASKMADMQLGHSIDIGDIIGTTARKQTLKTLECNDECRLIERNRRLAIGLQIRNPDLSAKLTPRYSDFMRQWTKKDQSFCQTVHDKLTELVQLAKQSKQKSRSYSFPSMNREKRQFIHEYCEHFGCESAAYDQEPNRNVVATASKDKAWLPSCSLLELIQRESGQRKVPGPILNRPLGISKNSDTVSLKVTSKPSSTTIQSTSFASTLQQQKSTESEIDYFNFPPNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -