Pcha006707.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- ZMIZ1_1
- Assembly
- GCA_002278615.1
- Location
- CM008233.1:20809027-20817634[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.088 9.4e+02 -0.0 0.7 4 24 512 532 509 537 0.88 2 2 4e-26 4.3e-22 77.9 4.4 1 50 595 644 595 644 0.98
Sequence Information
- Coding Sequence
- ATGCTGGGATATACATCCTATAGGGATTGGTCGCCGGCGGGCGCCACCCAGCAGCAGTTATCTGTCGTGACGACAGTTTGGGGTGTCACTACGTCCACCCAGTCCGGACCGCACGGAAACTTCGCCACCGGAAACGGACCTCCGCCTGGTGCTGCGAATAACGTGTACGGACACCAGTCGCTCAACAAACAAACAGCGACGTCTTTTCCTGGAGCATACAGACAGACGGTACCTGGgGTTGGCGGTTATGGCGTCAGTCAGTCGGGGGCCGGAATGAACGGAGCTCCTGGCGGTGGGCCGGGAGTGACGGACGGCACCGGAGGACAACAGTACCACCAGGGCAACGCTTTGAGTACGGCCGCGATGGTCGCTGCAGCTACAGCAACAGCCACTGCTACAGCCAGCGTGGTCGCATTGCAAGAAAATAACCAGTTCAATCAGATGCAAGGGCAGCAGTATGGTAACGGGTACGGTCAGCAACGAGGCCACGGACCGATAGGCATGTCTGGAATGGGCATGAACAACATGAATGGCATGAACCCAATGAACTCGATGGCGAACATGGGTATGAACGCAGCCGCAATGCATAATAATATGATGGGCGGTATGGGTCCTGGTACTATGAACATGAACAAGATGAGCATGCAAGTACCAGGTAATCAAGGTTACCCTAGACGACTTGCACCTTACCCATCACCTGCGATGCATATGTCGCAAAAACGAAGTCAACAAGGTTACCCAAACACTGGTCCAGGTCCCGGACCCACCATGCAACCAGGTTTCAATCCAAATAGTCCCCAATACCCTGCCGCGTACGGAAATGGCCGACCTAGCTTCCAAAACCAGTATCCACCTCAACAACAACTAGTATCCAGTGGTTCCTTCGGCCCTGCCGGAAATGTTCGTGGCACCGGTACCATGCGACAAACTACACCACCCTATACAACGTCTGGACAATATTTCCCTAATGGATCTATGGCTCCAACGCAGTTCCCAAATCATCATACGAGTAGTAGCCAGTATGGCGTAAACAATGGAACCGGTCAATACGGCGGGCCTAATAACCAGTTCCAACAAGAAGTAAATAGTATGCGAAATAACATGAATTACCAGCATAGTCCTATACCTGGAAATCCAACGCCGCCTTTAACACCAGCAAGCAGTATGCCACCATATATCAGCCCCAATCCTGATGTTAAACCCAACTTCAATGACCTGAAACCACCAATGCCCATCCAAAAAGATGATGAATTAAGATTAACATTCCCTGTTCGCGATGGTATTATCCTACCTCCGTTCAGATTGGAACATAATTTGGCGGTCAGCAACCATGTATTCCAACTGAAGCCCACTGTACACCAAACACTTATGTGGCGTTCAGATCTCGAATTGCAACTCAAATGTTTCCACCACGAAGACAGACAAATGAACACGAACTGGCCAGCAAGTGTTCAAGTTTCAGTGAACGCGACACCGCTGGTCATTGACAGAGGTGAAAATAAAACCTCACATAAACCATTGTACCTCAAAGATGTTTGTCAACCGGGAAgaaatacaatacaaattaCAGTATCAGCATGTTGTTGTTCGCATTTGTTCGTTTTGCAACTGGTACACCGGCCGAGCGTACGGAGTGTTTTACAAGGTTTATTACGGAAGAGACTCTTAACGGCTGATCATTGCATAGCGAAAATCAAACGAAATTTCAGCAACACAGTGAGTTCAGGGCCAAATCTGAATTCAGATCGAGACCGAGATGCGGTTGAGCAAACGGCGCTCAAAGTATCTCTCAAGTGTCCGATCACATTTAAGCGCATCACGTTACCTGCACGGGGGCACGATTGTAAACACATTCAGTGCTTCGATCTCGAATCCTACCTACAATTAAATTGCGAGCGGGGGTCATGGCGATGTCCTGTATGCAAtaaaccTGCACAATTAGAAGGCCTCGAAGTGGACCAATACATGTGGGgcatattaaatacattaactagTTCAGAAGTGGATGAAGTAACTATAGATAGTGCGGCGAATTGGAAACCTGCGAAAAATATTGCACAGGGAATTAAGATGGAAGATGATGGAAGTGATTCATGCGGGGCTAAGAGGCTAAACAAAGCAATGTCTCCTGGAAGCATGACATTACCAACGATGAATAATTGGGACATGTCACAAGCTATGTCACCGTATATACCACCAGATATGAATAGCATTGCTAGCGGTTCAATGATGAACAATGGACCACCACCTTACAACACAAATAACAACAGAAACGGACAAATGACGAATTCGTATGACTTCGGCTCTAGTTCAAACCCTGGAAGCAACGAATATGTTGGAGGCAACGGACCCCTATCTCATTTAAGCGATTCAGTCAATTCGTTAGATCCCTTAAATGCGATGGAAAAATCACTTAACGAACAGatGCCTCATACACCACACACACCGCATACCCCACATACACCGCACACGCCTGGTGGTACACCAGGCAGTGCGCATACACCGGGCGGCGGCAACAGTGGACCACCAAGCGTACCACCTCCCTCCAACGACCATAACCTGAACAATAGTAATACGTCGACAAGTGAAAATAACGCGTCTGCATCAGAGATTCCATCAGATTTAAACTTCGACCCAGCGGCTGTCATTGATGGCGAGGGCACCGGGCAGGAAGCACttaatTTATTACCAGATAGTGTGGACCCAATGGAATTATTGTCATACTTGGACCCACCCGACTTAAATACACCGCCGTCGAGCGGTGCAAGCAGTAACGGCAATAATAGTTCAGCGGGCGCAACCACAAATGACGACATTTTGGCTCTTTTTGAGTGA
- Protein Sequence
- MLGYTSYRDWSPAGATQQQLSVVTTVWGVTTSTQSGPHGNFATGNGPPPGAANNVYGHQSLNKQTATSFPGAYRQTVPGVGGYGVSQSGAGMNGAPGGGPGVTDGTGGQQYHQGNALSTAAMVAAATATATATASVVALQENNQFNQMQGQQYGNGYGQQRGHGPIGMSGMGMNNMNGMNPMNSMANMGMNAAAMHNNMMGGMGPGTMNMNKMSMQVPGNQGYPRRLAPYPSPAMHMSQKRSQQGYPNTGPGPGPTMQPGFNPNSPQYPAAYGNGRPSFQNQYPPQQQLVSSGSFGPAGNVRGTGTMRQTTPPYTTSGQYFPNGSMAPTQFPNHHTSSSQYGVNNGTGQYGGPNNQFQQEVNSMRNNMNYQHSPIPGNPTPPLTPASSMPPYISPNPDVKPNFNDLKPPMPIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNTVSSGPNLNSDRDRDAVEQTALKVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLTSSEVDEVTIDSAANWKPAKNIAQGIKMEDDGSDSCGAKRLNKAMSPGSMTLPTMNNWDMSQAMSPYIPPDMNSIASGSMMNNGPPPYNTNNNRNGQMTNSYDFGSSSNPGSNEYVGGNGPLSHLSDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPHTPHTPGGTPGSAHTPGGGNSGPPSVPPPSNDHNLNNSNTSTSENNASASEIPSDLNFDPAAVIDGEGTGQEALNLLPDSVDPMELLSYLDPPDLNTPPSSGASSNGNNSSAGATTNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00903784;
- 90% Identity
- iTF_00873505;
- 80% Identity
- -