Pcha016519.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- pnr
- Assembly
- GCA_002278615.1
- Location
- NEEE01002045.1:132675-141025[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 2.2e+04 -5.7 3.1 21 26 13 18 12 19 0.84 2 2 6.7e-17 2.4e-13 49.7 4.6 1 35 381 414 381 415 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATGTACCGCCAAAGTTTTATCAAGTGTGTCGTCTTTGTTTATCATGTCCGGAGAGCCAATGCGCTGATAAGGACATGAATGTGTCTATATTTGAAGCTGATATCGCAGAATCAGAGCGAAGGAATATCCCGCATAAGATAATGACGTGTCTTTCTATACTGGTATCAGATAACGATCCCTTACCACATGTTATTTGCGTAAAATGTGCAGAACAATTAGACACATTATATGGATTCCGAGAATCAGCAAGAAAAGCCGAACATATACTTCGCCAATTTTTAGCATATACACAACAATTGACTGGCTCACCaaaggaacaattaaaattatcaatgatGGCATTATCATCGATGATTCCATCAACGGGATATTTACTTCGAGCTCCTTCACCAACCACCACAAATCCAGAAATGAGTGATACTTCGTGCGAACCTGCAGATCTTTCCAAACGTTCGCCAGAAACAGAGGCGGAAGCTGTTACATGTATACCGGAAattcatcattttaaattaaaagaagaaatagaTGATACTATGTACGAAGATGAATtagctgaACAAGAAGCTGAAGCTATGATCAAAATGGAACAAGCTGAATCAATGCAAGAGGATTGTAAAAGTGAATGCAGTAGCGGCACAGACCCAGAACggttagaaataaattgtgaTGTAGCTGATATGTCCGAACCGCCCGAACCATCTCCACCATTGCCTCTAAACGCAACTACGACGTCTTCAGCAGAAGACGCAGAATTATGGAAAGCCTTAGGACCTGCAGAAAATGGTCATAGTGATTTGTTGCGTAAATTAATAacgtatagaaaaaaattaggtGTTAGTATAGCGCCCGCGCCTCCTGCAAGTCCGCCGCCTCAAATTCAAATACGACCGAAATCTCCTACGTTACCTGGTTCTCAGTTTGTTATCAGAGATTATAGTAgaaGTGGATTATCGATATTAAAAGACCGTCGTAAACAAAGCTTTCCCAGTCGCACACCTCATGATTTCCAAACATCACCACCTACATCCCCATGGAATAATCACTCCGTCCAAATCCCAAAACCTCCGATATCATCAGCAGCTACAACTTTTCCAACATCAGCAAGCTCAACAAAAAATCGCGTAGATCTTAGTTGTTCAAATTGCGGTACAATGACAACAACAATATGGCGACGAAATACGCGCGGTGAAATGGTTTGTAACGCGTgcggtttatattttaaattacacggTGTTAATAGACCAGTCACAATGAGACGAGACACAATTCATACACGACGACGTAGACCTAGAGTTAAAAGTGTCTCCATTATTGGAGAAAATAGTAAACAAGGTTGTGAAGAAGATATGCTCACAGCGTTACGGAAACATATACAACCGCAACTAATGTTAGCGGCAATACAAGCAAACCATTGTCGCGTAAAAGATTCGGTGAACGATGATAATAATTCGGAACCTGATCAAGAAATGGAGGGACAGGAAATTAAGGAAGAAATGGAATTGCctttaaatttagttgcaAGCGATGCAGAAAAACGATAA
- Protein Sequence
- MCNVPPKFYQVCRLCLSCPESQCADKDMNVSIFEADIAESERRNIPHKIMTCLSILVSDNDPLPHVICVKCAEQLDTLYGFRESARKAEHILRQFLAYTQQLTGSPKEQLKLSMMALSSMIPSTGYLLRAPSPTTTNPEMSDTSCEPADLSKRSPETEAEAVTCIPEIHHFKLKEEIDDTMYEDELAEQEAEAMIKMEQAESMQEDCKSECSSGTDPERLEINCDVADMSEPPEPSPPLPLNATTTSSAEDAELWKALGPAENGHSDLLRKLITYRKKLGVSIAPAPPASPPPQIQIRPKSPTLPGSQFVIRDYSRSGLSILKDRRKQSFPSRTPHDFQTSPPTSPWNNHSVQIPKPPISSAATTFPTSASSTKNRVDLSCSNCGTMTTTIWRRNTRGEMVCNACGLYFKLHGVNRPVTMRRDTIHTRRRRPRVKSVSIIGENSKQGCEEDMLTALRKHIQPQLMLAAIQANHCRVKDSVNDDNNSEPDQEMEGQEIKEEMELPLNLVASDAEKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -