Pcha007313.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- gata5-a
- Assembly
- GCA_002278615.1
- Location
- CM008233.1:17915201-17926999[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 4.8e-13 48.7 5.1 1 34 380 412 380 414 0.97 2 2 4.1e-18 1.5e-14 53.6 6.1 1 35 436 469 436 470 0.97
Sequence Information
- Coding Sequence
- ATGTGTTGCTTCACAATTATTTCGATGGACAATTCACAATCCCAAATTTCACCTCAACAAGAAATTGAACAACATCAAAGCCAGGAAGATATCAATTCTGCAGAACAAGAAGAAAATGTTCAACAACAAATCATTCAAAATGAATCAAATTCAGTTGTTGTGTCTATGCCTACTTCTATTTCACAACAACCAAGTGTTATAACAAGTAGAAGACATGTTCGCACAATTACTACTACTGGATTTATCACGGAAGAAGATATTAATTCAACTCAAAATAGTGCGTCTTCGGAggagcaacaacaacaacaacaacaacatgcAGCACCAGAAGCTGAGTCAGAAACAAATCAAATGCATAAAGATTCACCAGATAAAGATATAGGAGAGCAACAAATCTATGCAGATGAAGAACAATCGAACAATTATCAAACTTCAGTTGCAAATGATGCGTCGTACGAGGCTTCCCCAGAACAGCCTCAAGAGCGTTACCAAATATTGTATTCGACTTCTGCGGTTGATAGAGAACGTTTTCCACAAATGCAATCAAACGAAAGATTTATTGTTGAGCTCCCAACTGGCGCTAATACCATATATATTCCCACAATGGACGGAAACCAACATATGGAAGTACAAAACTATGAAGGTGCACAAAATGCTGAGGAGCCGAAAGAAATAACTTACGTCAATTTAGAAGTAGCTCCAACTGTTCAACATTCACCGTATAATACATTCCCTGAAACAAATCAATTACCCCAATCCGTTCAAGTTGATTGCGttgatcaatttataatatcaccAAATAGAATGGAAGGCTCAAGTCCTCCAATGTATAGGAATGATCCATCTTTGAATGATGCTTATATGGGATCGGAGCGAGCCActcaattattatatcaacATCATCCAGAGCAATCACAAGCGTTTGATGCTTCAACACCGTCAACATCCTCCGGACAAATTGCAACTATTTAcggattaaataataattcctaCCAATATTCCGTTAATGGAACAGATTACTTCAATTCCCCTCAAGTAACCGAACAAAATTTCTCGTACAGCACTGCAGGTCCATCGAATTGGAACgcaaataatgttaattttgaaggaaATATTATGCCCGGAGAAAATAGGGAATGTGTAAATTGTGGAGCTAGTTTAACACCATTATGGCGTCGCGATGGAACTGGTCATTATTTGTGTAATGCATGCGGTTTGTATAACAAAACTAATGGCATGAACAGACCTCCTGCTCGTAATCAAAAGAAGCCAACATCTataggAAACAGACGCGCTGGTGTAACATGTGCAAATTGTAGCACATCAAAAACCACTTTATGGAGAAGAAACAACCAGGGTGAACCTGTATGCAACGCTTGCggactttattataaattgcacaatGTAAATCGGCCAATGTCTATGAAAAAGGATGGAATTCAAACGAGGAAACGCAAACCGAAAAATTCGAACGGCGGAGGAATGCATTTACAACATAATCCGGGCATGCATCGGGCTACTGCAATGCAACCTCTACCACAACTGAaccataatacaatatatttgggGGCTGGAAATGACCATTATCAAATACCAGCTCAGTCACCTAATATACCAAGTGCTGCCCTACTCAACAATCAAATTGCTAATGTACAACAATTAGAGCAGCCTACATCGAATGCCCATATACATACCATATCGTCAGTCGAATTACCTAGTGTCATAACATCAACGTCAGAAGCATCTAGTGTCCATAACTTGAGGACAAGACACCAGCAACATAATCACCCAGATCGTACGATGGGAGATCCAAAGACACGAAGACAATGA
- Protein Sequence
- MCCFTIISMDNSQSQISPQQEIEQHQSQEDINSAEQEENVQQQIIQNESNSVVVSMPTSISQQPSVITSRRHVRTITTTGFITEEDINSTQNSASSEEQQQQQQQHAAPEAESETNQMHKDSPDKDIGEQQIYADEEQSNNYQTSVANDASYEASPEQPQERYQILYSTSAVDRERFPQMQSNERFIVELPTGANTIYIPTMDGNQHMEVQNYEGAQNAEEPKEITYVNLEVAPTVQHSPYNTFPETNQLPQSVQVDCVDQFIISPNRMEGSSPPMYRNDPSLNDAYMGSERATQLLYQHHPEQSQAFDASTPSTSSGQIATIYGLNNNSYQYSVNGTDYFNSPQVTEQNFSYSTAGPSNWNANNVNFEGNIMPGENRECVNCGASLTPLWRRDGTGHYLCNACGLYNKTNGMNRPPARNQKKPTSIGNRRAGVTCANCSTSKTTLWRRNNQGEPVCNACGLYYKLHNVNRPMSMKKDGIQTRKRKPKNSNGGGMHLQHNPGMHRATAMQPLPQLNHNTIYLGAGNDHYQIPAQSPNIPSAALLNNQIANVQQLEQPTSNAHIHTISSVELPSVITSTSEASSVHNLRTRHQQHNHPDRTMGDPKTRRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -