Pcha006347.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- pnr
- Assembly
- GCA_002278615.1
- Location
- CM008233.1:17932473-17968552[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-18 9.6e-15 54.2 3.2 1 34 132 164 132 166 0.97 2 2 1.9e-19 6.9e-16 57.8 5.8 1 35 186 219 186 220 0.98
Sequence Information
- Coding Sequence
- atgtttcactcAAGTAGTACTTCAACACCAAATGGTTACTCAGATTCAGCATCTTCAAATTTTCATCAGCATTTACATCAACAGCCACCTGTATATGTACCTTCATCTCGTCCTATTCCTAGTCAATATGCATCGAATGTAGGTGGTGGTCATTTTGGTTCTTCATCACATCAACCCACTGCTTCATGGCCACATGCTGCAGACCCTGTTAGCTATGTCGGGGGTGGACATTCACTTACAACAAATTCTCATCATGCAAGTCCATTAAGTGCTGGACAATTTTATGCTCAAAATATGATGATGAATTCATGGCGAGCATATGATAGTTCCGGATTTCAAAGAACATCACCTTATGATACTGCAATGGATTTTCAATTTGGCGAAGGCCGAGAGTGCGTGAACTGTGGTGCTATATCAACACCATTGTGGCGCCGTGATGGGACTGGACATTATTTATGCAACGCTTGTGGTCTTTACCATAAAATGAATGGTATGAATCGTCCACTTATCAAACCATCTAAAAGACTgACAGCAACAAGACGATTAGGTTTATGCTGCACAAATTGTGGTACACGTACAACAACGCTTTGGAGAAGGAATAATGATGGGGAGCCTGTGTGTAATGCATGTGGtctctattttaaattgcatggTGTAAATCGACCTTTAGCTATGCGGAAAGATGGTATTCAAACAAGAAAACGAAAACCAAAAAAGCCATCAGGGAATAATTCAAACAATGGAGACAGAGAAGAAGTTAACTCCGCCCCAAACGACGtttcagaTATAAAATCATCCTCAGTTCATCATTCTCAATCCAGTCAAAATATTCAACACTCATCAACAAGTACAGAAACATCTAAATCAAATTTAGATAGACCGTACTTAGGTCAAACATCTTTGTTACCAACAACATCAACTTCTTCAGGAATAAAAAGTGAACCAGGTTATGAAATATcacaatataattgtttacaaaCACATCAAGGTTATAGTGCGTATCATCAACAAATGTTCGGTTTTACTACGAGTCCTCCAAGCGGATCTGATGTTGCTTACCATCATCAACATCATGTTACTGCTGCTGCTAAACTAATGGCATCTTCAtag
- Protein Sequence
- MFHSSSTSTPNGYSDSASSNFHQHLHQQPPVYVPSSRPIPSQYASNVGGGHFGSSSHQPTASWPHAADPVSYVGGGHSLTTNSHHASPLSAGQFYAQNMMMNSWRAYDSSGFQRTSPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGNNSNNGDREEVNSAPNDVSDIKSSSVHHSQSSQNIQHSSTSTETSKSNLDRPYLGQTSLLPTTSTSSGIKSEPGYEISQYNCLQTHQGYSAYHQQMFGFTTSPPSGSDVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -