Basic Information

Insect: Pogonus chalceus
Gene Symbol: ZFY_1
Assembly: GCA_002278615.1
Location: NEEE01004245.1:107992-110067[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9.2e-07 8.1e-05 23.1 0.9 1 23 109 131 109 131 0.99

2 15 8.1e-05 0.0072 17.0 2.0 1 23 136 158 136 158 0.98

3 15 0.19 17 6.4 4.0 1 23 239 261 239 261 0.95

4 15 1.1e-06 9.9e-05 22.8 2.7 1 23 264 286 264 286 0.98

5 15 0.00099 0.087 13.6 0.3 1 23 302 324 302 324 0.97

6 15 7.1e-06 0.00063 20.3 0.3 1 23 327 349 327 349 0.97

7 15 0.00056 0.049 14.4 2.2 2 23 368 389 368 389 0.98

8 15 0.00071 0.062 14.0 1.2 2 23 395 417 394 417 0.94

9 15 2e-06 0.00017 22.1 0.2 2 23 424 445 423 445 0.96

10 15 0.00049 0.043 14.5 0.0 1 23 451 473 451 473 0.98

11 15 9e-06 0.00079 20.0 0.2 1 23 479 501 479 501 0.94

12 15 6.3e-06 0.00056 20.5 0.2 1 23 507 529 507 529 0.97

13 15 1.1e-05 0.00097 19.7 1.5 1 23 535 557 535 557 0.97

14 15 7.8e-08 6.9e-06 26.5 0.4 1 23 563 585 563 585 0.98

15 15 2.7e-05 0.0024 18.5 4.3 1 23 591 613 591 613 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9.2e-07	8.1e-05	23.1	0.9	1	23	109	131	109	131	0.99
2	15	8.1e-05	0.0072	17.0	2.0	1	23	136	158	136	158	0.98
3	15	0.19	17	6.4	4.0	1	23	239	261	239	261	0.95
4	15	1.1e-06	9.9e-05	22.8	2.7	1	23	264	286	264	286	0.98
5	15	0.00099	0.087	13.6	0.3	1	23	302	324	302	324	0.97
6	15	7.1e-06	0.00063	20.3	0.3	1	23	327	349	327	349	0.97
7	15	0.00056	0.049	14.4	2.2	2	23	368	389	368	389	0.98
8	15	0.00071	0.062	14.0	1.2	2	23	395	417	394	417	0.94
9	15	2e-06	0.00017	22.1	0.2	2	23	424	445	423	445	0.96
10	15	0.00049	0.043	14.5	0.0	1	23	451	473	451	473	0.98
11	15	9e-06	0.00079	20.0	0.2	1	23	479	501	479	501	0.94
12	15	6.3e-06	0.00056	20.5	0.2	1	23	507	529	507	529	0.97
13	15	1.1e-05	0.00097	19.7	1.5	1	23	535	557	535	557	0.97
14	15	7.8e-08	6.9e-06	26.5	0.4	1	23	563	585	563	585	0.98
15	15	2.7e-05	0.0024	18.5	4.3	1	23	591	613	591	613	0.99

Sequence Information

Coding Sequence: ATGGCTGTTGAACCGTCTTCAAAATGTCGTACTTGTTTACAAGAAAATCAAAACATGAAACTTTTATCTgcggaatattttatatgcgataatttattaactatttcagaaattatttcaaattgtactTCACTCGagattatagataatgaaaaatatccaCGCTATATTTGTGAAACATGTTTACAAGACGCAAACAcggcatttatttttaaaaaacgttgTGAAcaatctgaaaatattttaaaaacattattgattgaaaatagcgatgaaactaattatataaatatttataatcaaaaagaaaaaatagaattgtGCTTTCAATGCAACAAGTGTCCGATAAAatttacatCGCAAGATGAATTAAATTCACATTTATCAAcacatacaattaaaaaatacagttgTACTTTTTGCccgaaacaatttaattcagaaaaacgtttaaataaacatttaattaccCATGCTTCAAATTCATTACGTGCCATGCGACGATCTGGCCGCCAAACAAAAACTTCAAACAATTATGAAACTGATTCACtttacgaaaataattattccgaTAATGAATTAACACAAGAAGATATTAAACAAGAGTTAGACGAGAATTTCGTTgaaataaacgaaaatttcGATGAAATTTCAGCTGAAACATCAGGActtgaaatattaagaaacgcgaaagaaaaaaatgaaaatggtgTTTATGAATGTTTGTGTTGTACTGAAACATTTGAagatatttcgaaattaagAACACATTTACATTctcatgatatttttaattgtaaaatatgtaataaaaattttacacttttatcaaatttacgTAGACATTTAAAATCGCATTGTTCGAAAATAAAATCGGAAGATTTCGATAACGAGTCGTTAGAGTTTAAATGTATCGGATGTGATGAAATTTTTCCGCGGCGGAAACTTTTAAGCGAACATTTAAAATCgcataaagaatttatatgtCCCATttgtaatgttaattttacatttgctACAAATTTGCGTAAACATTTAAACTGGCATAAAAAGTCGAAAgatcaaacaaaaattttaaaacaaattccaGTTGAGAAACGCACTtgtgatatttgttttaaggtGTTTAAATACCGTCCAAGTATGTTAAAACATAggaaaaaacatgaatttagcgggaaaaaatgtaaattttgtgataaaatatttgaaaattctattAGATTGTATAAACATATGGAGGAATTACATgaacatgaaaaaaatatagtttgtacTGAATGTGGGAAGAAGTTTTTCCGGGaatggaatttaaaaatgcatatgATTGTCCATACTGGAGTTAAGCCCTATATGTGTGAAATATGTGGTGTTAGTTTTGCTTTAGGAGGAAACTTagCATCTCATAAACGATTACATACAGGACAAAAGCCATACAAATGCCAAACATGCGGCCGTGAATTCACCCAGCAAGCGGCCCTTCGCTCTCATGAAGCGGGTCATTCGAACCGCCGCGACCACGTATGCCCGGAATGCGGGGCGGCGTTTTCTCGAGCTGGTGCAATGCGTAACCACCGTAAGCGCCACTTATCAACTAAGCCATTCGCTTGTACAATGtgcgataaaaaatttacatttagttCGGAGCGGAAACGACACATGGCTATACATACCGGTGAACGAAATTTTGTTTGTGATTTTTGCGGCAAAGCTTTTAACCGTCCGACTAATTTAACTGTACATCGACGAATACATACTAAAGAGTTTCCGTTTAAATGTGATATTTGCGGGAAAGGATTTGTGCAAGCGCATTGCATGCGAACACATCGGAATACACataataaggatataatagaACAAgggaaaaatgataatattccaggacaaattcaaaatgaatatgttcctggataa
Protein Sequence: MAVEPSSKCRTCLQENQNMKLLSAEYFICDNLLTISEIISNCTSLEIIDNEKYPRYICETCLQDANTAFIFKKRCEQSENILKTLLIENSDETNYINIYNQKEKIELCFQCNKCPIKFTSQDELNSHLSTHTIKKYSCTFCPKQFNSEKRLNKHLITHASNSLRAMRRSGRQTKTSNNYETDSLYENNYSDNELTQEDIKQELDENFVEINENFDEISAETSGLEILRNAKEKNENGVYECLCCTETFEDISKLRTHLHSHDIFNCKICNKNFTLLSNLRRHLKSHCSKIKSEDFDNESLEFKCIGCDEIFPRRKLLSEHLKSHKEFICPICNVNFTFATNLRKHLNWHKKSKDQTKILKQIPVEKRTCDICFKVFKYRPSMLKHRKKHEFSGKKCKFCDKIFENSIRLYKHMEELHEHEKNIVCTECGKKFFREWNLKMHMIVHTGVKPYMCEICGVSFALGGNLASHKRLHTGQKPYKCQTCGREFTQQAALRSHEAGHSNRRDHVCPECGAAFSRAGAMRNHRKRHLSTKPFACTMCDKKFTFSSERKRHMAIHTGERNFVCDFCGKAFNRPTNLTVHRRIHTKEFPFKCDICGKGFVQAHCMRTHRNTHNKDIIEQGKNDNIPGQIQNEYVPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -