Pcha001779.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_002278615.1
- Location
- NEEE01002309.1:21847-26381[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.018 3.9e+02 1.0 2.3 59 113 43 98 17 125 0.51 2 4 0.3 6.5e+03 -2.9 1.7 67 84 234 251 202 272 0.33 3 4 6.7e-104 1.4e-99 332.6 7.8 1 218 274 482 274 482 0.93 4 4 0.0032 70 3.5 5.7 42 89 655 703 651 719 0.57
Sequence Information
- Coding Sequence
- ATGTCAAGCAGTGACATAATATCCGTGGATACTGCAGAAAATACTATATGCCTTACAGGCACCATTTCTAAATCTAATCTTAATACCgaagaaacaacaaaaatggGCAATCGAGAATCAAAAGATCAAGACAATCTCGACGAAAATAATGATCAATCTAATAAAGACAATGCTGAAGATACATCGCGTGTTTATTCTAAAGAAATCCCTTCAAATTCTCCTGTAGTTAcaactgtaaataatattagtgaATCAAACATTGATGAAGCCGCGAAATTAGAActaacctataaaaatataatagaaacaaataataaactagttgaaaataataaaacactattAGAAAAAGAAGATGGTGAAGATTCCGCAACGGAAAGTTTACCAGCTCCAGAGGAAACCGAACAAGAACCCCATGACCGCTCGGATGGCTCCGACTCTGGGCTGGGCTCAGAACTTGCAGAAGATCGCCCGATGACGGTAACGGCAACGCACCTGGGTGAAAGTGACAGTGAAACGTGTTTCCTAGACCCAGATCCTTTAACTAAAACAATCGATCCCGTAAATGTATTCGAAGATTTCGAGACAAACAAGATTCAACCTGATTTCGAATTGCCCTCAACTAGCACGGCCTTTAATCATCAAGAGTCACAAAAGTTAAATGACGTTGTGAAAATTGAACAACAAAACGCTAATAATATTGAACAAGATATTGGTGCGATATTAGATGAagctcaaaaacaaaataagcaACCGGAAAAAAGGAAAAGTAACTTGAAACGTAAATGTGTCGAAGAAGATGAAACTGAACCACAGATTAAGAAGAAACGCGGTATTTCTTTCGATACTGTGACGGTGTATTATTTCCCCCGAGCGCAAGGTTTCACGTGTGTCCCTTCACAAGGTGGCTCAACTCTCGGCATGGGTGCTACGCATAGCCATGTCCAACGGTTTTCGTTAACAGAACATGCTGTGGAACAGCGGCGCCTCCACCGTCAAATTTTGCAACAACTTCGTTCTGAACGTCATGTATCGACTGGTAATGGCAGTTCCAGTGATGATAGTGATAGTGAGGAAGAACCAAGTGATGCCTCAGAATCCGAGTTAGATTTAGACTCTTATTATTTCCTTCAACCAGTTCCTACACGGCAGCGACGCGCTCTGTTAAGAGCCGCAGGTGTTAGAAAAATCGACGCTTTGGAAAAAGACGAATGTCGGGATATTCGTTCGTCGCGCGAATTTTGCGGTTGCGGATGCAAAGGTTATTGTGATCCAGACACTTGTTCCTGCAGCCAAGCTGGGATTAAATGCCAAGTCGATCGTTTGAATTTCCCGTGCGGCTGTACTAGAGACAATTGCGCAAACTCAAGCGGGCGAATTGAATTTAATCCCGTACGCGTTCGAACTCATTTCATCCACACATTAATGCGTTTAGAATtggaaaagaaacaaaaagaaGAAGAATGCAAAACTGAAAATGGTGACGGTAATAATCCAGATAGTGGGGCAAGCACTTCACATTGGTCGGAAAATGAACGCTTAGCCTCCCAACCGAACACCTATCATCAACATCAGAACGGGATAGACCACCAACCGAAATATACTGGGACTTTACTACGAGATGTTAATCTTAACTCCCACGTGGAGGTAGAGTCGTGTGTCCATTCGGGAAGTTTCACTAATTTACATTATGGGGCACCCGGAGAAGGACCTGGCTCTTCGCATCACCCACAACAAGCACCTCCAAATTTCACTGATTTACACGGAAGAGAAGATTCTTTAGATCTGTATACTTTCCGGGAAGATTGTTACACCGAAGAAACAAGTACAAGTACTGCAGATACAACAACAActcaagataataaaattcaaccaTTCCCTTCGACAAGTTTTCATTTCTCTCAAACCGACCCAAGGTATAATCCAGATATTAGTGGATTATATCCTTTAGGACCTAATCAGTATCAATATCAAACCTTTTCTGAATTTccccaacaacaacaacagcagcaacaacaacaacaacagcagcagcagcaacaacaacaacaatcacaacaacaaaatttttcatcATACGGTTATGGACAAGATTTTTCCAGTCAGGAACAATTCACAACACCAAAAGAACCCGCGCAACAATATACTAATTTACATCCTGTTTGCCCGTTGACGGGATCAGGAAAATTAGAATCTTTTAGCGATTTATTACATGGAAGATATAGTTATTCAGGTTACGAAGACACTACACCCGTTGGACCCTTTGTAGCACCTTTAGAAATGTCTGAAAATCAAGATGGTGTATCCGGGGATATGGGAAAATGTGAAGCCATGCATATAGATGGCAATAGTGTTGCGTCATCAACAAATACAGAACAAAATGGCGATGATTGTGATGAAAATTTCggagaaattattaaaaaaaccatGGTTGAAAGTGTTTCAGCGTAA
- Protein Sequence
- MSSSDIISVDTAENTICLTGTISKSNLNTEETTKMGNRESKDQDNLDENNDQSNKDNAEDTSRVYSKEIPSNSPVVTTVNNISESNIDEAAKLELTYKNIIETNNKLVENNKTLLEKEDGEDSATESLPAPEETEQEPHDRSDGSDSGLGSELAEDRPMTVTATHLGESDSETCFLDPDPLTKTIDPVNVFEDFETNKIQPDFELPSTSTAFNHQESQKLNDVVKIEQQNANNIEQDIGAILDEAQKQNKQPEKRKSNLKRKCVEEDETEPQIKKKRGISFDTVTVYYFPRAQGFTCVPSQGGSTLGMGATHSHVQRFSLTEHAVEQRRLHRQILQQLRSERHVSTGNGSSSDDSDSEEEPSDASESELDLDSYYFLQPVPTRQRRALLRAAGVRKIDALEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCTRDNCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQKEEECKTENGDGNNPDSGASTSHWSENERLASQPNTYHQHQNGIDHQPKYTGTLLRDVNLNSHVEVESCVHSGSFTNLHYGAPGEGPGSSHHPQQAPPNFTDLHGREDSLDLYTFREDCYTEETSTSTADTTTTQDNKIQPFPSTSFHFSQTDPRYNPDISGLYPLGPNQYQYQTFSEFPQQQQQQQQQQQQQQQQQQQQSQQQNFSSYGYGQDFSSQEQFTTPKEPAQQYTNLHPVCPLTGSGKLESFSDLLHGRYSYSGYEDTTPVGPFVAPLEMSENQDGVSGDMGKCEAMHIDGNSVASSTNTEQNGDDCDENFGEIIKKTMVESVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -