Pcha007636.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- -
- Assembly
- GCA_002278615.1
- Location
- NEEE01003102.1:22420-24342[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0082 8.8 6.8 0.1 4 44 10 65 7 67 0.73 2 5 0.0016 1.7 9.1 0.0 16 46 135 175 117 175 0.78 3 5 9.9 1.1e+04 -3.1 0.1 8 20 209 220 209 225 0.76 4 5 0.00018 0.19 12.1 0.4 3 42 243 296 241 300 0.69 5 5 0.0043 4.6 7.7 0.2 4 45 400 452 397 453 0.87
Sequence Information
- Coding Sequence
- atgtctGATGCATCAGGAAAAGATTTATGGCAAAGAGCTGATACAATTcgcttaataaaattaataagtgattttaaaacatctaATAACAATGAATTAGTTAACAATAACGAAATGTTTATGCAAATAgcaaataaactatttgattATGGCTTTTCCCGTACTTATAttcaatgtaaaaataaatggaaagaTTTAGTTGAAAcgtataaagaatataaaaaagcattaagtgaaaataaaaatgtagatgAGCCAAATTTTTACTCTGaactagataaaatattaaataatacattaaacgCAAAGGAAGTATCttccgaaacttttaataaatttggtcCAATTTGGACACAATACGAAACAAGtttcttaattaaagttatgaaAGCTGgaagttttgtaaataaattaaaaactgacgATCCATTGAATGTTTATGAACAAATCGCGCAGTATATGCAAAAAGTAGGGCCTGTTTCACGAAATAAAGAAGATGTACAACAAAGGTggagaaatttaaaacattcttatataaaatatattaaaggagatttgcttcattttaaatatttcgaaacaaTGGACGATCTCTTAGACTGGGAACCGCATTCAATTGCATTTGAAGAAGATCAGTTTAAAGACGGCCATGAATATGGCGATGAAAATTACAACAATCCCGAAGATTATGATACAAAAAATGCACCTTCCGTTAAACGGGCTTTAAACTGGACGCATAAAGAAACTGAACTTCTTCTGGACGTCgtccaaaaatataacataaaacaaatgaaacgagATGATATCGCGAATATTTTCGACGAAGCCTCAGTCCAACTCCGACTACAAGGTTTTAAACGCTCGGCAGAGCAATGTAGagtgaaatttaaacatttaaaagttaaatatttcggATCACTTCGCCGAGTAGTAGGTGGTGAAGATCATCccgaaagatatttttatcattttgacAGAATGCGCGAAATTATGCAAAACGTCGGAGCTGATAGTTTCCTTGATACTGATAACGATAATAGCGATTTTACGCAAGACGATGCTGAAAGTTACGAAGTTGAATACCTTGAAGATGCCGAGGAAGGTGAACCAGAATCATTCGCGCAAGTTTTTCTAAAAGAACAAAaccattcaaaatatttagtcAATAACCGACATAATAGAAAAGGTAGGGCTATTTGGTCGCAAACAGaaacacaatatttattaagtttattaaaagtcCGGAATGTTAAAAGATATTGTCGAAGGCCTATGTTTGAAGAAATCGCATTGGAAATGTGTAAAGCCGGGTATAAACGCTCAGCGCAAATGTGCATGattaaatggaaaaatttGCGAAACTCATTATATTCTTGCATTCGAAATATGGTTGAAGGAAAAGAAGAATTATGTCCATTTTACGACGAAATCTGTGAAATCGTCCAAAAAAACGGTAACGTTGATGTCTCTTTAATATCCGACCAAGAGCACCAAGAATACGACGAATCAGAAGATTGTCAATTCGAAACCGAAGACTCAACTGACCATAAATTCCACGATCAACTAGATATAATCCCTTTAGAAACCCCGAAAACAACACAAAAACAAGAAACAGACTTAAACGATAAAAAACGCCTTCATTCAAgtctagaaattaaaaattatcccGCTACGGATTCTAAATTACCAAactctgtaaataaaaaaattaaatcagacgataataatattgaaactgTAAATCAAGGAACACAAAAAgatgataataatatgtatatttgtaattacaaaATGGACGATACAGAACATTATTGTATATCTTTAGCAACAACGTTTAAAAGATTACCAAAAAAGAAACAAGctaagttaaaaattgaaatacaaaaattgttatatgcAGCagaatttgatgaaaatttttaa
- Protein Sequence
- MSDASGKDLWQRADTIRLIKLISDFKTSNNNELVNNNEMFMQIANKLFDYGFSRTYIQCKNKWKDLVETYKEYKKALSENKNVDEPNFYSELDKILNNTLNAKEVSSETFNKFGPIWTQYETSFLIKVMKAGSFVNKLKTDDPLNVYEQIAQYMQKVGPVSRNKEDVQQRWRNLKHSYIKYIKGDLLHFKYFETMDDLLDWEPHSIAFEEDQFKDGHEYGDENYNNPEDYDTKNAPSVKRALNWTHKETELLLDVVQKYNIKQMKRDDIANIFDEASVQLRLQGFKRSAEQCRVKFKHLKVKYFGSLRRVVGGEDHPERYFYHFDRMREIMQNVGADSFLDTDNDNSDFTQDDAESYEVEYLEDAEEGEPESFAQVFLKEQNHSKYLVNNRHNRKGRAIWSQTETQYLLSLLKVRNVKRYCRRPMFEEIALEMCKAGYKRSAQMCMIKWKNLRNSLYSCIRNMVEGKEELCPFYDEICEIVQKNGNVDVSLISDQEHQEYDESEDCQFETEDSTDHKFHDQLDIIPLETPKTTQKQETDLNDKKRLHSSLEIKNYPATDSKLPNSVNKKIKSDDNNIETVNQGTQKDDNNMYICNYKMDDTEHYCISLATTFKRLPKKKQAKLKIEIQKLLYAAEFDENF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -