Pcha004054.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- crm
- Assembly
- GCA_002278615.1
- Location
- NEEE01005366.1:21997-27311[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-10 2e-07 31.2 0.0 1 44 108 163 108 165 0.94 2 2 1.7 1.8e+03 -0.6 0.0 22 30 164 172 163 179 0.86
Sequence Information
- Coding Sequence
- aTGGATATTTCcgattcaaacaaaaatttaactatacaacaacaaaatgaTACAATTATTGAAACCACAACGGTTACAAATGATGTACCCTCTTCTGTTATACAATCACAACCGATCGAAGAAATGCTCGGTTCTGTAACAACTTATAATAATGTCGAGGGACCTGATTCATCTGGCAATGCAAAAAATTGCCAGCAAGTACGAAGCAGCGCtagagtatttaaaaaaatgaaacttgAAAACGCACAAGCGTTAACAACTGCTgtagataaagaaaaaaaagatgttattattgataaaacagAAGTTAAAAAACCTTTTCGACCACAATGGTCACCTGaagataaagatatatttttcgaaGCATTAAATGAATACGGCAAAGATTTCGATGCTATTCAGCAGCATATTAATAATaggtttaagaaaaaaagtctTCCAGATACTCTTTTTAAAACCAAGGATCAAGTTAGACATTTTTACTATCGTACCTggcataaaatttctaaacatCTTAAGTTTTCTGAAGatattaaaaaacttgctCAGGAATTATATGCGCTTATAAATTTCGGTGAACTTCGTAAAAAAATCGGGCCTGTTACAGAAAAAACttgtatgaaattaaatgaactTATTTACCGCGGTACTGTTGCTATAAGGGTTAAAGGAAAAACGATAAGGATTAAAACACCAATGTGTCGAGCCTTACGGAAGCTCAACCAACTAgatgaaaaacatgAGGATTTAAAGTTGCCTACACGAGTATTAGTAGAATTAAGGCCGAAATCAATAGAAACCTGGCTACAAGTACAATTTATGTCACAAAATCCAAGAGTACGACTTTATTTACCTCTCCAAAGGCGATTAAGTGCtttattaacttgtttaaatGATCGATGGAAATCACAACTTACACGAACAcatGAAAAAGTTCATAGTTACATAAGCAATACATTAAACGAAAATCCACCTTGTGCATCTTCATCAAATGGAATCGTTCATAATCATCTTTTAAGATTAACACCCAAGACTAATTGTTTCGTAGAAGTtccttcaataaatttaagtgaATATTTAACGAGCCACCGAATTTGTTTGAACGCGTATGAAGAACGAGTTGGTGTTAAAGTTCCTGGTGAAAGATTAAGTATGTGCAGTAGTTTTAAAGGAGGTGCCAAATCGGGAACTAAAAATCGAGGGATTAAGAGGCATCGAAATGATAGTGCagtatatattttaggaGAAAAATGcgtaaaacaaaaagaaagcTGTGATGAACAAGACAGTGATAATCCAACTACAGTAAGCGATGTAGTTGATTCcgcaataaatactattttatctttacaaAAACAAGATTCAGATAAAACTGAATCAGATTCAAGTCAGAAAGACGAATTAAAAATCGAACAAACAAAATCCGAAAAAACAGATACAAATTCTTTTACACCTTGTAAAACTGAAGAaatctcaaaaattaaaaacggtTGGACTTTAGAAGATTGCGGAACTTTAACCATTggtgaaatgtatttaatgtttggtCAAGATTCCAAACTAGAATTAGAATACTCATGGGATGTAGCTGAAGTAAAAAATGAATGCATTGAGAATAAATCACAATCAACGACTGAAATAAACGATAAACCcgaagaaaatgaaattgaaaagtcAGCTAATGATGTTTCAGTtactttaaagaaattattatctcTTGCTAAGTTACATTACCGGAAAGAAAGGCTTCGATGTCCTTGTGGACATATCTGTGGAGGGTCTAAAGCTAATACGGCTAGTAGAAGTAAATCTGTTTCTACGAAAACTAATCAACGAATTACAGTTGAAGAAaaaaatataaacgtaaaTAAGACTGCAGCACCAGAAAATACAATTCGTAATAATAATCCTAGTTTACAAGTTAATTCAAATTGTATTCGAAATGTAACAGTTAAATCTGAACCAATGTTCAGAAAACCAGCTATTTACCCATCAAATGGCGCAACCACAGATTCATTCAGAGCACAATTAGATtCGTTACAAAAAATGCGgccaaaatatacaaatcgAAAAGGTCGCCCCGTTCGTAATAAACACGTTGTAGTTGAAAGAATGCTTCCTTTATTACCAAAACCATTAATTAACGGCCATTCCATTGTAACTATGAAAGTTATTTCACAAACTGACgattttaaaaaccaaaataaacttCGACCAATTGCACCGCGAATTGAAGAATCTACAACGGAAACCGTAGAACCTCTAGAAGGTGAAACTTCCGGAGTTGAACCAAATAAAAACGGCGCAGAATTTGAAGCCCCACCGACATTCTTTTTATCTGCTAATTTAACTGGAGAAAATAATGGAATACAAACGCAATTAACGCAAGAAGAAGAACAAGGTGTTACTAATGTAATCCCAACAGAACGAGTTACCTCCCCAACTAGTATATCCAATTTTCTGGAGTTTGATATTCCCACGGGAGATACAAATGATCTGATTTTACAACATGCTGTTGCAAATAGTAAAGATGGTCTTACAAGTTTTGCcgGATTGCTATCAGCTGATGATCTTCCTGATACATCAACTCCGTTGTCAAGTCCTTCAAGGATACTTAAAGAAAATGATCACCAATGGTTAAATTCTGAAGTAAATGATTATTCGTTAACTAGTTTACTTGGACATTTAGAGTCACCAATGAAAACGACTACCCCGGCTATTATTCCTTGTGATGATACACCGATTTCGCAAGATattgatTCCCAATTTCCGTCTTTATTGGGAGAAAATGGAGTGGACTTTGTAGATCAATTTGTAGACATGGCAGCTCAAGTAGATACAGTAAATAGTGATATCGAGCAATTAACTAATACATaa
- Protein Sequence
- MDISDSNKNLTIQQQNDTIIETTTVTNDVPSSVIQSQPIEEMLGSVTTYNNVEGPDSSGNAKNCQQVRSSARVFKKMKLENAQALTTAVDKEKKDVIIDKTEVKKPFRPQWSPEDKDIFFEALNEYGKDFDAIQQHINNRFKKKSLPDTLFKTKDQVRHFYYRTWHKISKHLKFSEDIKKLAQELYALINFGELRKKIGPVTEKTCMKLNELIYRGTVAIRVKGKTIRIKTPMCRALRKLNQLDEKHEDLKLPTRVLVELRPKSIETWLQVQFMSQNPRVRLYLPLQRRLSALLTCLNDRWKSQLTRTHEKVHSYISNTLNENPPCASSSNGIVHNHLLRLTPKTNCFVEVPSINLSEYLTSHRICLNAYEERVGVKVPGERLSMCSSFKGGAKSGTKNRGIKRHRNDSAVYILGEKCVKQKESCDEQDSDNPTTVSDVVDSAINTILSLQKQDSDKTESDSSQKDELKIEQTKSEKTDTNSFTPCKTEEISKIKNGWTLEDCGTLTIGEMYLMFGQDSKLELEYSWDVAEVKNECIENKSQSTTEINDKPEENEIEKSANDVSVTLKKLLSLAKLHYRKERLRCPCGHICGGSKANTASRSKSVSTKTNQRITVEEKNINVNKTAAPENTIRNNNPSLQVNSNCIRNVTVKSEPMFRKPAIYPSNGATTDSFRAQLDSLQKMRPKYTNRKGRPVRNKHVVVERMLPLLPKPLINGHSIVTMKVISQTDDFKNQNKLRPIAPRIEESTTETVEPLEGETSGVEPNKNGAEFEAPPTFFLSANLTGENNGIQTQLTQEEEQGVTNVIPTERVTSPTSISNFLEFDIPTGDTNDLILQHAVANSKDGLTSFAGLLSADDLPDTSTPLSSPSRILKENDHQWLNSEVNDYSLTSLLGHLESPMKTTTPAIIPCDDTPISQDIDSQFPSLLGENGVDFVDQFVDMAAQVDTVNSDIEQLTNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -