Pcha004350.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- DNAJC1
- Assembly
- GCA_002278615.1
- Location
- NEEE01008455.1:25137-26796[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-07 0.00083 19.7 0.0 2 35 290 326 289 331 0.85 2 2 4.4e-07 0.00048 20.4 0.1 2 35 384 421 383 422 0.90
Sequence Information
- Coding Sequence
- atgtgtaattatttaaaatgtatctaCGTGATCTGTACacttttactgatttttacATCAGTAAATGCTTGGGATTCAGATCAATTGGAAATATTCGATTTAgttgaagaaataaatcagaatttttataatatactaaaCGTTTCACAGGATGCTGAtcttcaaacaataaaaaaagcattCCGTGGCCAATCTCTAGTCTTACATCCAGATAAAAATAGTGCACCAGATGCAGAAGTACGTTTTCGAAACTTAGTTTCAGTATATGAAGTTTTAAGAGATCCTGAAAAGCGTTCTCATTATGATGATGTTCTTAAAAATGGATTACCTAACTGGAAATCagcagtttattattatagacaTGTTAGGAAAATGGGCTTGACTGAAACCTtagttacattatttattatgataactATTGGGCAATATTTAGTAGCTTGGGGGTCGTACGTTGAGAAAAAATATACTGCgGAACAAGTTTATGgggcaaaaattaaaaaacaacaacgTAAGAGAGGGGCTGTAGCAGCAGAGTTAGTTGAAATGTTAGATATACCAAAACCTtcacttaaaaatacattgcCAATACAAATTCCAATGATAGTTTGGTTTGCCATAAAAGAAGCTGGGCCAGCATCAATAAGATTAGCTGCTTGGATCAATGAAAAAcgaaaagaacaaaatatgAAAAAATCGCAAGAAGATGACAATTGCTCTGAAGAAGAAGTTGTCGAACAACGTGTCAGACCTGTTAGAAAACGTAAACCTGGATTTGTTCCTATGGAAAGAGATGATAGCGAGTTACCTCCACGGCTGGTACATCTTCAGCCAACAGAATCTGATTCCGCGCCTGTAGTTATTTCAGGGGGTTTATGGACGGATGATGATCTTGCAGAACTTGTTCAGTTGGTTAAAAAATATCCAGGAGGAACCCCAGATCGATGGGAAAAAATCGCTGATACAATGAAAAgaaCTGTTCCAGAAGTAACATACATGGCtaataagttaaaagaaaaNTCCAGAAGtcaagaagaagaaaaacctCCAGATGAAGtaccaaaaaaacaaaaaacacgaGGTGGAAAATTAGGAAATGTATCAACAAATGAAAATGTGGCtaataatacttcaaattcCACATCTAGTACAGGTACTTGGAcacaattacaacaaaaagcaCTTGAAGCAGCGCTGGCTAAATATCCAAAAGGACCTACAGATAGATGGGAAAAAATCGCAAAATGTGTAccagataaaacaaaagtataa
- Protein Sequence
- MCNYLKCIYVICTLLLIFTSVNAWDSDQLEIFDLVEEINQNFYNILNVSQDADLQTIKKAFRGQSLVLHPDKNSAPDAEVRFRNLVSVYEVLRDPEKRSHYDDVLKNGLPNWKSAVYYYRHVRKMGLTETLVTLFIMITIGQYLVAWGSYVEKKYTAEQVYGAKIKKQQRKRGAVAAELVEMLDIPKPSLKNTLPIQIPMIVWFAIKEAGPASIRLAAWINEKRKEQNMKKSQEDDNCSEEEVVEQRVRPVRKRKPGFVPMERDDSELPPRLVHLQPTESDSAPVVISGGLWTDDDLAELVQLVKKYPGGTPDRWEKIADTMKRTVPEVTYMANKLKEXSRSQEEEKPPDEVPKKQKTRGGKLGNVSTNENVANNTSNSTSSTGTWTQLQQKALEAALAKYPKGPTDRWEKIAKCVPDKTKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -