Pcha008050.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- rcor2
- Assembly
- GCA_002278615.1
- Location
- CM008238.1:4388067-4392745[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-09 2.8e-06 27.6 0.0 3 46 131 174 129 174 0.97 2 2 2.7e-13 2.9e-10 40.4 0.0 3 46 380 423 379 423 0.98
Sequence Information
- Coding Sequence
- atggTTTTAGCTGAAAAAGGAAATGAAAATGTACGAAACGGTCGGAGGAGTCGGGGGCCGAGCCCTAATGGTCATGCTGCTACAGAGTCTACAAGTGAAGATGAGAGtacagtaccaGTTGATAAAATTCGTGTGGGGCGTGATTATCAAGCTGTTTGTCCAGAATTACAACCCGTGGCTAGTCGTCGACCAGATCAGTTAGCAGATAGGGCTCTTCTAGTATGGTCCCCCACTGTAGATATATCTGAACAAAAATTGGatgaatatattacattagCCAAAGAAAAATATGGTTATAATGGCGAACAAGCATTGGGCATGTTATTTTGGCACAAACATGATTTAGAGCGAGCTGTGTTAGATTTAGCAAATTTTACACCATTTCCAGATGAATGGTCAGTTGaagataaagttttatttgaacaagCATTTCAATTCCATGGTAAAAGTTTTCACCGCATTAGACAAATgttgcCCGACAAGAGTATCGCtagtttagttaaatattattattcatggAAGAAAACACGATCTCGTACAAGTCTTATGGATAAACAAGCACGTAAATTAACAGCGCCACGTGAGGAAGGTGCTGCTTCTGAAGCTGGCTCCGAAGGAGGATCTAATGAGGAATCTGATGCTGATGAAAAGAAATGGACAATACACCGTGGAATTCGACGCAAGAGCGGCTCACCACCGCGTGCTGATGCAGAAATAGGCGCAAATCAGGCGGGGGAGGGGGGCGCGTGCGGTAACTGCGGCGTCGCCTGTTCTTTCACACATGTCTCACCCAAAGGCGCACTCTGCCATTCCTGCTTTCAACATTGGagGCGCACGGGCGCGTTACGGCCAACGTCGGGGCCGTCAAACAAGCGTGGTGGCGTCGCGGCGTCTTTAGCGGGAAGACATAAACGACGACCACCTCGAGGCATGCATATCAACCACGATGATTTAGCAGCGATGGCTGCTGGCGCACAAGGCATGCAAATGTTGCGCGCCATGGATAGAGAAATTGTTTCATTGAAAAGACAAgtaCAACAAAATAAGCAAACAATTAGCGCGTTAAAACGAAAAACATCTGATGGAATCGATGATGTGCGCCCACCAAGTGATTCAAATACATCCCGCATCAATGCACGATGGACTAACGAAGAATTACTACTAGCCGTTCAAGGTGTTCGAAAATAtggaaaagattttaaaaccaTTGCAGAAACATTGGGTACAAAAACTGAATCACATTTGCGGAGtttctttgtaaattataGACGTCGATATAATTTGGATAGTGTGCTGAGAGATTTTGAGAAGGATAATGGTCCTGTAAATGTATCACCAGATGAACCAATAGATTCAACTATTGAGAAAATGGATGTTGATTTGGATACATCAGAAATTTTGTCTAATAATACTGATTCTAACACAGTTGTATCCATGACTACTACATCTGTTTCACCAACACCAAGAGCTGTTTCAGCGATACcattaaaaacttcaaattcaGCAACTATTAGCAATTCCAATAAAACTACCACTACCACTGCAGCCATTACCAATACGcaactaaataaatga
- Protein Sequence
- MVLAEKGNENVRNGRRSRGPSPNGHAATESTSEDESTVPVDKIRVGRDYQAVCPELQPVASRRPDQLADRALLVWSPTVDISEQKLDEYITLAKEKYGYNGEQALGMLFWHKHDLERAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLTAPREEGAASEAGSEGGSNEESDADEKKWTIHRGIRRKSGSPPRADAEIGANQAGEGGACGNCGVACSFTHVSPKGALCHSCFQHWRRTGALRPTSGPSNKRGGVAASLAGRHKRRPPRGMHINHDDLAAMAAGAQGMQMLRAMDREIVSLKRQVQQNKQTISALKRKTSDGIDDVRPPSDSNTSRINARWTNEELLLAVQGVRKYGKDFKTIAETLGTKTESHLRSFFVNYRRRYNLDSVLRDFEKDNGPVNVSPDEPIDSTIEKMDVDLDTSEILSNNTDSNTVVSMTTTSVSPTPRAVSAIPLKTSNSATISNSNKTTTTTAAITNTQLNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104257;
- 90% Identity
- -
- 80% Identity
- -