Pcha021072.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- -
- Assembly
- GCA_002278615.1
- Location
- NEEE01001353.1:63412-66326[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.09 97 3.5 0.1 5 45 250 295 250 296 0.82 2 5 8e-07 0.00086 19.6 1.2 1 44 302 347 302 349 0.93 3 5 1.8e-12 2e-09 37.7 0.5 1 44 355 402 355 404 0.96 4 5 0.00026 0.28 11.6 0.0 3 44 412 453 410 454 0.89 5 5 2.7e-05 0.029 14.8 0.3 2 44 460 500 459 502 0.84
Sequence Information
- Coding Sequence
- atggaaaatattaataacgatattttaaaactaacatCTATTATAGAGAGCAcaaataatgaTGATTCAAGTTGTGATTCAGATTCTTTTGAAAATGAACTTCATCacgatttaaaattagttgtaGAAAATTCATCGTTACctgaatcaaatttaaatgacgAAGATATTGTATATGTCATTAAAAACTGTTCTGATCCGTTAATTAGAAATGCCCTAAtatgtaacattaaaaaacgTTCTATTCTAActgaaattaagaaaaaaatagaagaaaatctaataaaaataaaaaacttacaatCGGAAAATCATGTTAGAAGTTTAAAAGccgcaaaaaataataagaaaataattataaaaaaacgatTAGGAATCCCATATTTCAAAGATGAGGGATTATTTCCAAGTCCACCAAatgaagattttattaaaatacaaaaaaataaagaattttctgCCCTTGATTACAGTAATATAGAATACTGGAAACCAAATCATAAAGATGAACTtgtaaaagcaatttttaaaaatatttgcgctaaaaaattgaaagaaattaaatctgAAGTTAATGCATTAGagaaattagaaaatgaaGACAAAGAAACAACTAAAAAGAAACTATTATTGCTTAATGAAGAGTctatattaaacaatgaaacacttatagaaaatttagcaAAACAATGGcagcatataaaaattaaaggaaataatattataattaaagaaacaattattgAAACATCTGAGGAAGattattatctaattaaaacaataaatgaatttaacatCGACAAAATTAATTGGGatgaaatttcttataaaattcttaattcgAAATTTACTGCTGCAGAATGTAAAGCTATGTGGAATTGTTATTTACATCCGAAATTTAGCAAAGAATCTTGGTTAGAAGCGGATAATCAACAATTACAAGAGTTAGttataaaatggaaatatcaaaattgggaagcaatttcaaatgaattacaaaatcaaaaatctGCTTATCAGTGTTGTGTACATTTTTATTCGAAGTTACATGATAAATTTTCTAGAACAAAGTGGTCAATAGAAGaggaacaattattaaaaaaattaattgaaatgtgtCGAATAgggaattatataaattggtcGAAAATAACTCATTATTTTCATGGTCGAACAAAATCTCAGatatataatcattattatcaAGCAATGGAAACTAATGTAACTAAAGGTTTTTTTACAATAGAAGaagatgttttattattagcacttttgaaattatacaataacgatataaaacatgcaaaattttattttccaactCGTTCTCTTGTACAATTACGGGAAAGATATAAAACTATGAGTAAAGATGATAGTCAAGAATGGACTCTAGATGATGATTGTCGAATTATAGATCATGTTGAAAAATATGGCGTTAAGAAATGGTATCTTTTAGATTTAAACAGAACAAATGCTTGTATGAGACAtcgttttaatactttaagaaAATGGTTTGAAGAACATCCACAAGAAAGTTTAAAAGATGTTCCAAGACgatttaaaactgtttataaaaaaagattaaaaaccCGACatgatttattaactattgctgttcaaaatttaattgaagacgttaaatcaaatgaaaataattcaagcgaaattttaaatttagattatatatttaaaaatatattaaataaaatacctctGTATCATAatttaacgaaaaataaatataattgctaTAGTCTCAAAAGACTTagtatgaataaaacaaagaaaaaatctgaaatatcATTACGTcagtattttatgaaatttttacaatcatcttttaaatgtatatcaaGAGGAAAATTTCCCCAAatagaagaagaagaaattgAAGAAAGAACTGAAAGTATatcgttaattttaaatttattaggtgCGAAGCTAAACATTCcagatgaaaatgaaattgataataatatattattaactgatgtagataaaatgattttaaaacgaaTGTTATCACAACAAGAAAATACACTAACTGTAGCAACAACAAATAATGTTAGACCATTACATTATCTTATACCTCCTTCTGTAGAGACTTTAATTGGATTTCGTGGTCTTATGCTACACTCAACTACCTTACGAGCGCATTCTCGAGGTATATACGAAGGCTATCAGTTTTATGTTTACGCAGAACATCATTATGATAAACTTGGTGTTAAAGCATTACAAAGACGCAGTGAAATGGTTTTATGTGATCTACCAGTTAAAGAAAgacaaaatgttattaatgaacgaaaattattttggcAACGattacaaatgatttttagTTGGCCTTGTATTTTACAAGATACAAGAGTTGaaccatatataaataaagaaaaagaaattaaacctCCAAGTgtaccaaataaaaaaagtaaagccaaaaataaaaactggaaaattgaaaaaatgaataaaataagactTGAAAAATATCGAttgaaaagattaaataatttaatagctgAAAATAATGTTCCTTCTACaagtcaaaataatttatatgaaattactaCAGGAAGTGATAATTCTGTACAAATTACTTTAactaataattctataaatgtttctgaagatatatctaaaaatgaaattatttcaacagaaaataatatatctcaaacaaataaaaataaaagaaaaaaattaagtaatgaaaatattactttgattCCAgcgaaaaaaatgaaaatagaagaaaaagaaaattaa
- Protein Sequence
- MENINNDILKLTSIIESTNNDDSSCDSDSFENELHHDLKLVVENSSLPESNLNDEDIVYVIKNCSDPLIRNALICNIKKRSILTEIKKKIEENLIKIKNLQSENHVRSLKAAKNNKKIIIKKRLGIPYFKDEGLFPSPPNEDFIKIQKNKEFSALDYSNIEYWKPNHKDELVKAIFKNICAKKLKEIKSEVNALEKLENEDKETTKKKLLLLNEESILNNETLIENLAKQWQHIKIKGNNIIIKETIIETSEEDYYLIKTINEFNIDKINWDEISYKILNSKFTAAECKAMWNCYLHPKFSKESWLEADNQQLQELVIKWKYQNWEAISNELQNQKSAYQCCVHFYSKLHDKFSRTKWSIEEEQLLKKLIEMCRIGNYINWSKITHYFHGRTKSQIYNHYYQAMETNVTKGFFTIEEDVLLLALLKLYNNDIKHAKFYFPTRSLVQLRERYKTMSKDDSQEWTLDDDCRIIDHVEKYGVKKWYLLDLNRTNACMRHRFNTLRKWFEEHPQESLKDVPRRFKTVYKKRLKTRHDLLTIAVQNLIEDVKSNENNSSEILNLDYIFKNILNKIPLYHNLTKNKYNCYSLKRLSMNKTKKKSEISLRQYFMKFLQSSFKCISRGKFPQIEEEEIEERTESISLILNLLGAKLNIPDENEIDNNILLTDVDKMILKRMLSQQENTLTVATTNNVRPLHYLIPPSVETLIGFRGLMLHSTTLRAHSRGIYEGYQFYVYAEHHYDKLGVKALQRRSEMVLCDLPVKERQNVINERKLFWQRLQMIFSWPCILQDTRVEPYINKEKEIKPPSVPNKKSKAKNKNWKIEKMNKIRLEKYRLKRLNNLIAENNVPSTSQNNLYEITTGSDNSVQITLTNNSINVSEDISKNEIISTENNISQTNKNKRKKLSNENITLIPAKKMKIEEKEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -