Pcha016762.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- kn_2
- Assembly
- GCA_002278615.1
- Location
- CM008239.1:1458825-1468476[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-127 3.8e-123 412.1 14.9 209 570 27 377 19 385 0.81
Sequence Information
- Coding Sequence
- ATGCACCAACGTTACGATCCAAGATCCTACATCGTTACCTCATGTTCGTCTCTTGTACCCTCCGCAGGAACTAGCACCAAGgttgTTATAGCAACTCAAGTAGCAGTAGATGGTCCATTATTAGCCATCTCAGATAACATGTTCGTACATAACAACTCTAAGCATGGTAGAAGAGCGAAACGTTTGGACCCTGCTGAAGGTATCTATCCATATAgttTATATCCTCCTCTTCCGGTAGCGACTCCGTGTATCAAAGCGATAAGTCCTAGTGAGGGATGGACATCTGGAGGATCAACAGTAATAATAGTTGGAGACAACTTTTTCGACGGATTACAAGTCGTCTTTGGAACGATGCTTGTATGGAGCGAGTTAATAACACCGCACGCAATAAGAGTACAGACACCGCCGAGACATATACCGGGTGTTGTGGAAGTGACGCTCTCGTATAAATCGAAGCAATTCTGCAAAGGCGCGCCCGGAAgatttgtttatgtttCGCTGAACGAACCAACGATAGATTACGGATTTCAAAGGCTGCAGAAACTCATCCCACGACATCCTGGGGATCCTGAGAAGTTACCGAAGgaaattatattaaaacgcgCTGCAGATTTAGCTGAAGCTTTATACAGTATGCCACGAAATAACCAATTGTCCTTATCAGGACCACGATCACCTTCCATGACCAATAACGGCATGTCCGGAGGATTCAACACTTATACAGGACAACTGGCCGTGAGCGTGCAGGACACCGGAAACGGTCAGTGGACTGAAGAAGAGTACGGCCGGCCGCAAAGCAGTTCCGTGTCACCAAGAGGGGGTGGTTACTGTTCAAGCGCCTCAACCCCTCATAGTTCTAACGGTGGTTCTTACGGCGGTGGTAACGCACCTTCCATGAACGGATACGGTACTACGACCCCTACATCAGGCGCGCAGTTGGGTAACATGTTACCCGGAAGCCCATCTGCCGGAATTTTCAATTCTACATCAAtagcaAACGATTCTTATCATTTCGGCTCACATCAATACACAAAGTATTCATCAGAAAAAGATAAAGAACGAAGTGCTTTTGCTCCTGTATTGTTGCGCTTAACATCTCCGCACACGCATGCTCACACAACACATGCGTCCTCGCACACCCCTGTACACCATCAACCACCGTATCATCATGTACATCAACCCCCTGCTAGCTGGCACCATTTAACAGTTCAatgttag
- Protein Sequence
- MHQRYDPRSYIVTSCSSLVPSAGTSTKVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGIYPYSLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSGPRSPSMTNNGMSGGFNTYTGQLAVSVQDTGNGQWTEEEYGRPQSSSVSPRGGGYCSSASTPHSSNGGSYGGGNAPSMNGYGTTTPTSGAQLGNMLPGSPSAGIFNSTSIANDSYHFGSHQYTKYSSEKDKERSAFAPVLLRLTSPHTHAHTTHASSHTPVHHQPPYHHVHQPPASWHHLTVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429627;
- 90% Identity
- iTF_01229484;
- 80% Identity
- iTF_01229484;