Pcha001364.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- Kdm5
- Assembly
- GCA_002278615.1
- Location
- NEEE01002933.1:60080-71153[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-24 6.7e-21 74.7 0.0 2 89 121 204 120 204 0.94 2 2 6.3 2e+04 -3.7 0.0 49 63 1028 1042 1026 1048 0.78
Sequence Information
- Coding Sequence
- ATGACACCAAATAAGATGATATCGAAATTAGAAAAGACTGGTGGATGCAATTACACAATGGCATCACCAGGAACGGGAAACAAGACAAATGTTTCACCTGCTTCATCTGATAAATCTACAGCAaaagaagaattttattttcaagtaccTCCAGAAGCACCTGTTTTTGAACCAAATGAGGAAGAATTTCTTGATCCATTggcatatataaacaaaattcgtCCACTCGCAGAAAAATCaggaatatgtaaaataaaaccccCTCCTAATTGGCAACCACCATTTGCTGTTGATGTGGATAAATTAAGATTCACTCCAAGAATCCAGCGACTTAATGAATTAGAAgcGAAAACTAgagtcaaattaaattttcttgacCAGATTGCCAAATTTTGGGAATTACAGGGTTCATCGTTAAAAATTCCAATGGTAGAAAGGCGTGCTCTTGATTTGTACTCTTTACATAGAATTGTACAAGATGAAGgtGGCTTAGAGACTTGCACAAAAGAACGCAAATGGTCTAAAATTGCTGCACGTATGGGAAATCCACAAGGCAAGGGTATCGGAAccattttgaaaaatcattATGAAAGAATTCTTTATCCTTTTGATGTTTTTCGTCAAGGAAAAACACTTGCTGATATTaaaatagaaCCTAAAGAAGAATACAATGAGAAAGTCGATAAAGATTATAAACCACATGGTATTATTAATAGGCAACAGATTAAACCCCCACCTGAGAAACATGCCCGTCGTTCAAAACGTTATGAAAGTTCATGTCCGTCCACCACACCTGATAAACCTGAGTGTAAAGATTTCAGTATAAATTCGAGTGATGGAGACAATAATAAAGAACTACGACGCTTACAGTTCTTTGGGGCAGGCCCAAAAATGGCCGGTTACaatcagaaaataaaagaagataaGACGCGAGGGAAGAAGGCCAATTACGACTACGATCCCCTTGCGAAGTACGTTTGCCACAATTGCGGACGAGGCGATATTGAGGAATCCATGCTGCTGTGCGATGGCTGTGACGATAGTTACCACACCTTTTGCCTGCTGCCGCCGCTTACCGAAATCCCGAAGGGTGACTGGCGATGCCCTAAATGCGTTGCAGAGGAAGTTTCCAAGCCCATGGAAGCCTTCGGTTTTGAACAAGCCCAGCGCGAATACACCTTGCAGCAGTTTGGCGAGATGGCTGATCAATTCAAAtccgaatattttaatatgcccGTTCATatggTACCTACACCATTAGTGGAAAAAGAATTCTGGCGCATCGTATCATCCATTGATGAAGATGTTACCGTTGAATACGGGGCTGATTTACACACGATGGATCATGGTTCTGGTTTTCCGACGAAAACATCATTAAATCTTTACCCAGGAGATCAAGAATATGCAGATTCCAGCtggaatttgaataatttacccGTTTTAGAAGGTTCCGTACTTGGTCATATTAACGCTGATATATCGGGCATGAAGGTACCATGGATGTATGTCGGTATGTGTTTTGCAACATTTTGCTGGCATAACGAAGACCATTGGAGTTACTCCATAAATTATCTACACTGGGGTGAACCAAAAACATGGTATGGCGTTCCAGGGAGCAAAGCAGAGACCTTCGAAGAAACTATGAAATCAGCAGCTCCAGAATTGTTTCATTCGCAACCCGATTTACTTCATCAACTTGTCACTATTATGAATCctaatattttgatgaatGCCGGCGTGCCGGTATTCCGTACAGATCAGCATGCGGGCGAATTTGTTATTACATTTCCTCGCGCTTATCATGCAGGTTTCAATCAAGGCTATAATTTTGCTGAGGCCGTTAATTTTGCTCCAGCTGATTGGTTGAAAATGGGTCGGGAATGTATTTCGCATTATTCACATTTACGtagattttgtgttttttcGCATGATGAGCTGGTCTGTAAAATGGCTCTTGATCCCGATAAATTAGATCTTACCGTTGCGGCAGCTACTTATCAGGATATGTTGATAATGGTTGACAATGAGAAGAAGATGCGGAAAAGTTTACTAGAAtggGGTGTCACTGAAGCTGAGCGCGAAGCTTTCGAATTATTGCCTGATGATGAGCGTCAGTGCGAAGTATGTAAAACAACTTGTTTTTTGTCGGCTATGACTTGTAATTGTTCTGAAAACCTTGTATGTCTACGACATTACACATCTTTATGTTCATGCCCGCCCGAAAAACATACATTACGCTATAGATATACATTAGATGAATTACCACTTAtgcttcaaaaattaaaattaaaagctgaGTCATTTGATAATTGggttaatttagttaaagatGCGTTAGATCCAAATACACCAAAAACTTTAGATTTGTctcaatttaaagaattattaaaggaAGCAGAGGAAAAGAAATTTCCTAAATCTGAATTATTACAAACTCTTACGATGGCTGTTGAGGATGCTGATAAATGCGCTAGTGTAATTCatcaattagatttaaataaaattcgcaCAAGAACAAGAAATTCCGCTGATACCAAATATAAACTAACTGTAGAggaattaactttattttgtgaAGAAATTGATAGTTTAGCATGTACATTAAAAGAAGCAAAGAGCGTGAAAgacttattaaaacaaaccCAAGATTTTCAACAAGAAAGTCATCGTCTTCTTGGATTAACATTAGCGGAAATTGATTCAAATGaattagaaaattgtattGACTCGGTATCCGGTTTCTGCATCGAATTAACAGAAATTAAACCATTACGCAATAAATTAGCTCAAGTTAATTGGCTTAAAGAAGTTAAAGAACTACGAAATAAAGACGATTTAATGACTGTAGAGACCTTGCGTACATTACTTGCTACGGGCATTGCATTACCTGTCGATACAATCTTAGAAATTGAATTAGCCGAATTGCAGAACATACTTACTGATGTAGATGAATGGGAGGAAAAGgctaaaatgttattaaacaatGATCCTCCATCTCCACTAGCCgatattgaaaaaatgttaacaTACGCGGATTCAATTGATGCGTTTTTACCGACCGAAGAAACTTTACGcgatattgttaaaaaagccAAAGAATGgaccaaaattattaatgaaatacattCTGGTGAAAATTACCCATATTTTGATACATtggaagaaattattaaaaagggtCGTAGCATACCAGTTAATCTTAAAGAATTAGAAAGATTAGAAAACCAATATAACTCCGCGAAAATATGGAAAGAAAGAACTGCTCGCACGTTCTTACGTAAAAATGCCAATATGCATGGGCAATTAATGGAGGCATTATCTCCACGCTCATTTTCTGCTGGCCCAAGCAAAGGTCCAGGGAAAAAGCGTAATGCTGCTAATATGGAAGATGATGGATTAGGTTCAGTCAGtcatattaaacttaataaaaatttagaccCCGTGCAAGTTGTCTCTGCGTTTAAAGAGGCGGAAGAAAGAGAAATGGAAGGAATTCGTACACTTCGTGTACGAAATTGCCGTAAATATAACGATGATGCGACAGATTCGGAAACATACTGTATTTGTCGTGGACCACTAGCAGGATTTATGTTACAATGTGATTTGTGTAAAGATTGGTTCCATGGTACTTGTGTACCTTTGCCTAAAATATCTTCTCACTCAAATGCGTCTAATAAAACGGTGAAAAATAACGTTAACAATCAAGCATCTGCGTACAAAGATACCCGATTCTTATGCCCTCTGTGTTATAGAACACGTCGCCCGAGATTAGAAACAATACTATCTTTATTGGTTTCGTTACAAAAATTATCAGTTCGTTTGCCAGAAGGTGAAGCATTACAATGTTTGACTGAAAGAGCTATGAACTGGCAAGATCGCGCTAGACAAACCTTATGTACAAAAGAATTAGTTAGCGCtctaacaaaaatttcaattcaagCAGATCATTTAGTTAACAATGACgtgaaaaaaattccaaacgaccctgaaaataaaaatcgagTACAATCCAAGAAAGATTCATCTAAGAAAGACGATGAAGATTTTAGTAGTGAAGAATCCGAATCAATGGATGGATATCCTATGATTTCTTGTTCATCTAGAGATGAGCCCCCTAAATCACCATCAAAATCAAAAGGTGATGATTTTGCTAACGACGAACATACTTATTCATTAAACTTAACAGATAGTGGTCATACCACGCCTGCAGTCGTTCATCTTAGTGATGCAACGAAGGAACATTTGGAAGAACTTTTAATGGAAGGCGATTTACTTGAAGTTTCCCTGGAAGAAACTAATCACATATGGAAATTATTACGTGCTTGCAAAGTTGAAGTCGAACGAACATCTATGGATTTTGatGAACTGGAGTGCCAAAACAAAACCGGTTTCCGCGGCAAATCTCGTGGCCGTAAACGAAAATCCGATGAAGGCGCGCTTGATAATCCAAAAaagaatcttaaaaaaatattagatatagAAAAGAAATTCCGCGGTGGAAAAATTAAAGGTCCAATGAAAGAAGGCGTACGTAAACGCCGACAAGGACGTGAAggacaaacaaataaaaagtcgACTACAAAACAAAGTAATATGTCGGATGATGAAGAAGATTGCGCAGCGTCAGCTTGTTTACGACCGAATGGTAGAGAAGTTGACTGGGTACAATGTGACGGAGGATGTGATCAGTGGTTCCACATGCATTGCGTTGGTTTAGATAAGCACGATATAAACGAAGATGAAGACTATATATGCATTAAATGTTCACAAAATAATCCACAAAATATTGACGTGTCCTTCTTCCAATCTGGTTCACCGGGCAGCCAAACAGATGAAGATGATAATGACTGTTCATAA
- Protein Sequence
- MTPNKMISKLEKTGGCNYTMASPGTGNKTNVSPASSDKSTAKEEFYFQVPPEAPVFEPNEEEFLDPLAYINKIRPLAEKSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYSLHRIVQDEGGLETCTKERKWSKIAARMGNPQGKGIGTILKNHYERILYPFDVFRQGKTLADIKIEPKEEYNEKVDKDYKPHGIINRQQIKPPPEKHARRSKRYESSCPSTTPDKPECKDFSINSSDGDNNKELRRLQFFGAGPKMAGYNQKIKEDKTRGKKANYDYDPLAKYVCHNCGRGDIEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLYPGDQEYADSSWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAETFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSHLRRFCVFSHDELVCKMALDPDKLDLTVAAATYQDMLIMVDNEKKMRKSLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAMTCNCSENLVCLRHYTSLCSCPPEKHTLRYRYTLDELPLMLQKLKLKAESFDNWVNLVKDALDPNTPKTLDLSQFKELLKEAEEKKFPKSELLQTLTMAVEDADKCASVIHQLDLNKIRTRTRNSADTKYKLTVEELTLFCEEIDSLACTLKEAKSVKDLLKQTQDFQQESHRLLGLTLAEIDSNELENCIDSVSGFCIELTEIKPLRNKLAQVNWLKEVKELRNKDDLMTVETLRTLLATGIALPVDTILEIELAELQNILTDVDEWEEKAKMLLNNDPPSPLADIEKMLTYADSIDAFLPTEETLRDIVKKAKEWTKIINEIHSGENYPYFDTLEEIIKKGRSIPVNLKELERLENQYNSAKIWKERTARTFLRKNANMHGQLMEALSPRSFSAGPSKGPGKKRNAANMEDDGLGSVSHIKLNKNLDPVQVVSAFKEAEEREMEGIRTLRVRNCRKYNDDATDSETYCICRGPLAGFMLQCDLCKDWFHGTCVPLPKISSHSNASNKTVKNNVNNQASAYKDTRFLCPLCYRTRRPRLETILSLLVSLQKLSVRLPEGEALQCLTERAMNWQDRARQTLCTKELVSALTKISIQADHLVNNDVKKIPNDPENKNRVQSKKDSSKKDDEDFSSEESESMDGYPMISCSSRDEPPKSPSKSKGDDFANDEHTYSLNLTDSGHTTPAVVHLSDATKEHLEELLMEGDLLEVSLEETNHIWKLLRACKVEVERTSMDFDELECQNKTGFRGKSRGRKRKSDEGALDNPKKNLKKILDIEKKFRGGKIKGPMKEGVRKRRQGREGQTNKKSTTKQSNMSDDEEDCAASACLRPNGREVDWVQCDGGCDQWFHMHCVGLDKHDINEDEDYICIKCSQNNPQNIDVSFFQSGSPGSQTDEDDNDCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -