Pcha002967.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- ARID4B
- Assembly
- GCA_002278615.1
- Location
- CM008235.1:9675849-9690641[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-28 2.2e-24 85.9 0.3 1 89 295 380 295 380 0.94
Sequence Information
- Coding Sequence
- ATGcAAGGAGACGATCCTCCATATCTTCCTGTAGGAACTGCAGTTAGTGCTAAGTACAAAGGTGCATTTTGTGAAGCAAAAGTTAGTAAAGTAGTTCGATGTGTAAAATGcaagataacttataaaatggGTCTTGGAACAGCGACAGTCACTGATGAACAAATAAGGGGCCCTCTTCGGGTGGGACATACGGTCCAAGCGCGCCATTCagagaaaaaagaatttatcgAAGCAACAATTACTAAAATTCAAGATTGTAGTCAATACACTGttgtatttgatGACGGGGATATAACAACATTACGACGGACAGCCTTATGTTTAAAAAGCGGTCGACATTTTAATGAAAGTGAAACATTAGACCAACTTCCGTTAACACATCCAGAACATTTTGGAAATCCAGTAGTTGGTGGGAGACGAGGTAGACGAAGTAGACAACTAAAggaAGACAGTAGCGAAGGTGAACCAGAAGAAGAAACCGAACCTGATTTAGATTTATACAGCGGTGATATTGGCAAAGTTGTTTGCGTTGAGggaaatgaaaagaaaaagagTAAGGATAATTGGTTCCCAGGTCTCGTCGTCGTCCCTAGCGCACAACCTACCGTACGGATAAATGTTCgagaagaatatttaattcgaTCATTCAAAGATGGACGATAttaCACCGTTCCGAAGAAAGAAATATCCGAATTCTCCCGCGATATGGGTGCTCGAATCGAAAGCACAGCTTTATCCGAAGCAATGGAAAAAGCATTACGATACTTAGACCGTGACGAACTTCCAATCCATTGGGAACGTGCAACTCTGTTCGATTTACAGCTTCCCGATTCAGATTCCGATGAAAATTACACCGATAGTTCGGATGATGAGCCTCGTGAGGAGAAAGATCACTTTGTCGCCCAGTTGTACAAATTTATGGACGACCGCGGAACACCGCTTAATAAAAGTCCGATGATTGCAAACCGTGATGTAGATTTATATCGTTTATTCCGCGTTGTTCATAAACTCGGTGGTTATAATCGTGTTACTAATCAATCAAAATGGAGATCAGTAACAATTAGACTTGGTTATCAACATAATCATGCTACGTATAATAGTGTTAAACAAGCATATAAAAAGTACCTGTTTagttttgaagaattttatcGTAAATTAGGTTGTACGATGATAAATCATCCGCGAAACGCGAAAAAACATCGCGGACGAAGTTTAATCCGTGATAGGGACCGCGCTACTCCGGTTAATAGTAGTCCTAGACCCGAGCGAAACGAAGACACGAACCCAGAACCGGAGAAAAAGGAAGAAGAAAAACCTCCTGTTGTTCAAAGGCCGAAAAGTTCTCTTTCTAAGAAAGTCGTcgaaaaagaagaagaaaaaattaagaaaaaagaaattattgaatCTAGTGATACAAGTAGTAATAGTAGTGAAGGGACAATTGATGTGCAATCAGATTCTGGACAAAGTACTTCGAAGAAAGATGAACCAAAAAAGAAAGTCGATGTTAAAACTGTTAAGGAACGAAAGGTTAAAGGCGCTACTGGGGAAAAAGTTAAAGCGCTAGTTGAACAATTTGAGGAACAAACTAAAAAGGAAACCAAAGAAGATGATAAAGTGCAACAAACTCGCTCGAAATCATCTCAAGTACCTAAAGTTAAAGAAGCTTCTTCACCGGATCGAAAAGAAGCTCCTGTACGTGGTACAAAGACTCCTAAAAAACAAGAAGAAGATAAGCGACGGGGCCGGAAACGGAAGGATACTGTTGAAACTGAAGTTAAAGTCCAACAGGAAACaACTCCTGAACCAGCTCCTAGCACCCAACCTGTAAATATCggtgataaattaaaagtatattatggTCCAACACATGAATCTAAAGTTACTTACGAGGCAAAAGTTTTAGATATTGAAAGAAATAGTACTGGAATTGTATATCGCGTTCATTACACCGGCTGGAATACACGGTATGATGAATGGATAAAACCAGCTAGAATAGCCGAAAACTTAAGTAACACAACAAAAGCTAAACGATTAAAACAATCGTTAACACCAGGTAAGGCGACTCCACCAAAATCCGCGGGTAAAAGAGGACGTGGTCAATCCGTAAGTAGCCGTTCACAAGATCCTCCGCCACGTTCAACAACCCCATCCTCCGTGACATCATCGTCAAGTCGAACAAAAAGCCCTGCTACTCCTGCCAGCAGCAAAACCCCTGGATCTTCACGAATCACGCGTGGAGGTGCTTCAGATACAAGTGGAGGTATCACAACTAATAGAAGAACTCGTAAAACATCCGCCCATACAGATTTATCCGTTCTTTCGGAATCTGACTCGGAGTCTGATCAATCAGAATCAGAACTAACTCGAACGCGAAGCGGAAAAACTGACGAAGTTAAAAGACGAGGTCCTCTTAAACGAAAAGAAAAAGACGATGATGATACAGAAAAGGAAGAAGATGAAAAACCCAAACGTGTTTTAAAACGAAAGAAAACCCCTGAACCCCTTAGAAGTTCCACCGCAGAAAGTGATGAAGACTCATCATCACCGCCGAAAGGAAGAGATTTCGATTTGGATCAAATCAGATCTGAATTAAAAGGATTCGAAAAAGcagttaaaatatcaaataccGATACATCAGTTGATGTACCTGAAGAAAAACAACCTGTTATTGTTGAACCCAAACCTTCCGTGAGTGAGAAGAAATCCGAGGAAAAATCTAAACCAATTGAAAAATCATTAAGTACTGACGATATTTACGAATTCAAAGAACCAGAACCTTTCGAATTCGAGACGCGGACTTCAAAACTCGGTGAAGATAAGGCAACGAAGAAACGGTCAGTTGCTCGGTTGTTTGATGATATGGAGAAATCCCCGAAGAAGAAAGGTGGTAAATCACCACCAAAGAATGAGACCAAGGAAGAAGATAAGAAACGTACTTTTAAACGTACGCCCGTTAAAAAGCTCgaagaagaagaagagaaAACCCCGCCGAAAGAAGAAGTTACCCCAGTTAAAAGTCGTCCAGTTTCTTCCTGTGAAGATCCATTCGATAAACTTGTTGAATCGCCTTCATTCAATATTGGACATGCTCTTTCGGAGAAGAAATCGCCTCCTTCGGAGACTGCCAAATCGAAAGTTGTTAAATCGTTGAATATGGATGAAACATTAAGCTTATTCCGTGAACTTCCCGAAACAGTTGGCGATGATAGTAGAGACCGCTTAGACATGTCGGACACAGATGATACGCAAACGGAACCATTATTCAGTCataaagaacaaatattttccgATGCGTCGTTCAGTAAAGCAGAAACTTCAACGTTGGACCCAATTTTCCGCGGTTTTACAGGTAGTGTTAAGTGTGAAAGTGGTGATGAAACTAAAAAACGTTCTATTAAAGATGGCCAAAGTGATGAAGATGATTCTATCACCGCTGCAATACAACGTGCAATATCAAATACGATGACGGATGAAGACAGTACCGaagatgatttatttattacacaacCCACGGCAATTTATCaaccaaaattaaaatcaaaagaagaaattaaaacatctCCAACACCGACAAACGTAGTACCAGTTAAAAAAGAAACCTCATCTGTATCTTCATTAGAAGATATCAAAGAacctttaacaataaatacaaaagaagAATCCAAGGAACAAAAGGAAATTAAAGATTCATCAAAACCAAAACAAATTTCACCGGCCTTACAAGAAACAGATAGCTCATTACTTGAAGCAATAAGTCTTCAAACAGAAATgctaaaaaaagaagaaacacGGGAACCCCAAATCAAAACAGGAACAAAAATAGCCGATTCAATTcttcaaaaattcaatatgatcaagaaaaatgaagaaataaaaccaGTTAAAGTTGAGCCGAAAGTTGAGCCACTGTCTCCAAAATTGGAGAAACCTGAAGAACCAATCAAGAAAGAGGTAAAACCTGAACCtgaaatcaaatcaaaagaACCAGTTCCTGAAGTTCCAGTCAAAACTGAACAACCATCTGAAGTTGAGATCgctgttgaaattaaaaaacgatcTAATAAAAAGGTTGTTAGCAGAGAATTTATCGAAGAATCGGATACTGATAGTACTGATTCGGAGGAGCGATTAGTCATAGCTAGATCTGATGAAGATTCCCAAACAAACCCATCagataaaattgatttcaaagATACAGACAGTAATATTTCCATTGTTCAACCAAATACAGATGAATCCCAAGAATGCGAAAGGAATTTCAAATTGGAAGCAATTAAACCAGCTGAAACAATTGTTGAACCTACTCCAGAGCCTGAAGTACCTAAACCTGAACCAGAACCTGCAAAAACAGAAGAAGAACCTGaaagtaatatttcattattacttTGCAAGGAAACTATTCCTGGTAGTCCAGCGCCGGTTCCAGAAATGTCACCAGCATCGACAGAGTCACGTAGTAAACCAAAAAGTGCTAAAAGTTTATTACTTGAAATGCCGTTTGCTAGTGCACCTGGAAGTAGCAACAGTAAAGGATTATTAAATCCTGTTGAGTTAGCACCTCAACAACAAAAACCTCAAAATGTAGTACAAAAAGAACCTCAACCACTTGCCGTACCTTTAGAAACcactgaaacaaatgaaacaagtGCGGTTATTGATAATACCCCGCCTACTACACCTGAAAgtacaatttcaaatttatcacCAAGAGGtgatCAAGATAGAATTTCCCCTAATACAGCTGATAATGAAAGTTGTAAGTCTACTGACTCTGGACAACGTGCGCAAACCAGCAAAGTTACCCACTACAGTGAAGAAGatacatTAATGACAACAGAACCAATCCCTGTCCCTCCAAAGAAAATCCCTAGAGAAGAAACTGCAGCTCCATGCAGAAAACGTCGCCGATCTTGTAAAGCATCGGACGAAATCCCAGTCAAACGAGGCCGAAAGCCAAATGTTCGAAATGTCCGAGCGAATAGTGATAGCGACGACACCTCGGAACATTCCGTCGCGGCTTCGGCCTCACCGGCCGGCGGTTCAACCCCAAATGCGGCTACAACTGAAACCAGATTAAGCTCCAGGTCACCCCGGCCGTCGAAATTCAACTTTATCATTGAACTAGaCCCGTCTATGGAGTGTGGGCAAAGAATCTCTTTgttaacacaaaaattatcAGAATTACGAAAAACGTACAATAATGTTAAGACTGAACTAGCGTGTATTGATAGAAGGCGGAAGAAGTTACGACGAAGGGAACGTGAagCATTAAAGGCAGCGAAACAAGAGATGACGTGTTCATGA
- Protein Sequence
- MQGDDPPYLPVGTAVSAKYKGAFCEAKVSKVVRCVKCKITYKMGLGTATVTDEQIRGPLRVGHTVQARHSEKKEFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQLKEDSSEGEPEEETEPDLDLYSGDIGKVVCVEGNEKKKSKDNWFPGLVVVPSAQPTVRINVREEYLIRSFKDGRYYTVPKKEISEFSRDMGARIESTALSEAMEKALRYLDRDELPIHWERATLFDLQLPDSDSDENYTDSSDDEPREEKDHFVAQLYKFMDDRGTPLNKSPMIANRDVDLYRLFRVVHKLGGYNRVTNQSKWRSVTIRLGYQHNHATYNSVKQAYKKYLFSFEEFYRKLGCTMINHPRNAKKHRGRSLIRDRDRATPVNSSPRPERNEDTNPEPEKKEEEKPPVVQRPKSSLSKKVVEKEEEKIKKKEIIESSDTSSNSSEGTIDVQSDSGQSTSKKDEPKKKVDVKTVKERKVKGATGEKVKALVEQFEEQTKKETKEDDKVQQTRSKSSQVPKVKEASSPDRKEAPVRGTKTPKKQEEDKRRGRKRKDTVETEVKVQQETTPEPAPSTQPVNIGDKLKVYYGPTHESKVTYEAKVLDIERNSTGIVYRVHYTGWNTRYDEWIKPARIAENLSNTTKAKRLKQSLTPGKATPPKSAGKRGRGQSVSSRSQDPPPRSTTPSSVTSSSSRTKSPATPASSKTPGSSRITRGGASDTSGGITTNRRTRKTSAHTDLSVLSESDSESDQSESELTRTRSGKTDEVKRRGPLKRKEKDDDDTEKEEDEKPKRVLKRKKTPEPLRSSTAESDEDSSSPPKGRDFDLDQIRSELKGFEKAVKISNTDTSVDVPEEKQPVIVEPKPSVSEKKSEEKSKPIEKSLSTDDIYEFKEPEPFEFETRTSKLGEDKATKKRSVARLFDDMEKSPKKKGGKSPPKNETKEEDKKRTFKRTPVKKLEEEEEKTPPKEEVTPVKSRPVSSCEDPFDKLVESPSFNIGHALSEKKSPPSETAKSKVVKSLNMDETLSLFRELPETVGDDSRDRLDMSDTDDTQTEPLFSHKEQIFSDASFSKAETSTLDPIFRGFTGSVKCESGDETKKRSIKDGQSDEDDSITAAIQRAISNTMTDEDSTEDDLFITQPTAIYQPKLKSKEEIKTSPTPTNVVPVKKETSSVSSLEDIKEPLTINTKEESKEQKEIKDSSKPKQISPALQETDSSLLEAISLQTEMLKKEETREPQIKTGTKIADSILQKFNMIKKNEEIKPVKVEPKVEPLSPKLEKPEEPIKKEVKPEPEIKSKEPVPEVPVKTEQPSEVEIAVEIKKRSNKKVVSREFIEESDTDSTDSEERLVIARSDEDSQTNPSDKIDFKDTDSNISIVQPNTDESQECERNFKLEAIKPAETIVEPTPEPEVPKPEPEPAKTEEEPESNISLLLCKETIPGSPAPVPEMSPASTESRSKPKSAKSLLLEMPFASAPGSSNSKGLLNPVELAPQQQKPQNVVQKEPQPLAVPLETTETNETSAVIDNTPPTTPESTISNLSPRGDQDRISPNTADNESCKSTDSGQRAQTSKVTHYSEEDTLMTTEPIPVPPKKIPREETAAPCRKRRRSCKASDEIPVKRGRKPNVRNVRANSDSDDTSEHSVAASASPAGGSTPNAATTETRLSSRSPRPSKFNFIIELDPSMECGQRISLLTQKLSELRKTYNNVKTELACIDRRRKKLRRREREALKAAKQEMTCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01225440;
- 90% Identity
- -
- 80% Identity
- -