Pcha018045.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- Ubp1
- Assembly
- GCA_002278615.1
- Location
- NEEE01006370.1:28622-41492[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-69 1.1e-65 221.3 0.0 22 221 265 461 250 463 0.94 2 2 0.027 2.9e+02 0.8 0.0 7 66 644 703 639 711 0.86
Sequence Information
- Coding Sequence
- ATGGATTTCCAATTGTATGATTATtctgaaaacaattttacgaATGAACGATttcatgatttaaaaaattcgtgGGCTATTCCTTCGGACGCAAGTATGGAAAGTAACGAAGAATACTTTAATTGGACAAATGACTTGAAGTTGGCATTAGGAAATCCAAAGCAGTACAATGTAAATACTATTGCTACATCATCGGCCGGAAAATACGTCACTGGTAACGAACAAACTCAAAATcctaaattagaaaatagaaaaCGAAAGTTTTTTTCCAACGCTGTTGAAAACAcatgtaaaatacaaattgttgATGAGTTGAAAGATCCTTTGCAACTTTCACcgaataatacaattattgagAAACGTAATTTAGATAAACGGGAAAATTTAACCGgcACAAGAATTCCATCATGGCCCGTTGATGAAATTGCTGATAATTTAACAGCAGAATTAAATGGTACACTTACAAATTTAAGTGCAGAATTTGGAAATACTACTTATAATGTCAGtGATGCACTATTAGCCTTACCAAgtttaactgtttttaaacaaGAAGCCCCGTCTCCTACTTCTCATGACAATGCGGCTACAAAAACTAATCAGCCAAATCAATCTGTTGCTCAAACAACCGctacaaatgatttttctgATTCTAacaataatcaaaattcaataaatactactttacaaaatttattgagtaGCGGATATACAGGCATTCAATCGCCTATTGAAAATGgagGAGTTGTAGATTCACCATCATCACAAGATGGTCTTCGAAATGTTGTTTCCTCAAGTGATTTATCAGAAGATTCCCGGTTTCAGTACGTGTTGGCAGCTGCAACAAGTATTGCAACTAAAGTAAATGAAGATActctaacatatttaaatcagGGTCAaagttatgaaataaaattgaagaaattaggagatctttcaaattatagaggaagaattttaaagaGTGTAATTCGAATATGCTTCTATGAACGTCGATTACAATACATGGAAAAGGAACAAATGTCTTTATGGCAAAACTCACGTCCTGGAGATCGCATTATTGAAGTTGATGTACCTTTGTCTTATGGTTTATGCGAAGTTACTCAACCgccaaatcaattaaatgctGTTCACTTTCTGTGGGATCCTACAAAAGAAGTTGGTGTATATATAAAGGTAAACTGTATAAGTACCGAGTTCACTCCAAAGAAACATGGTGGAGAAAAAGGTGTTCCATTTAGAATCCAAGTGGAAACCTATTTAAACGGAGACTCAATCAATCCTCCTAAACGTTTGCATGCAGCTGCTTgtcaaattaaagttttcaagCTGAAAGGCGCCGATAGAAAACATAAACAAGATAgagaaaaaattatgaaacgaCCTCCATCGgaacaagaaaaatatcaaCCTAGTTATGACTGTACTGTCCTAAATGATatTCCAAATGATTTCGTAGTGCCTGCTCCATTACCTGCCTTAAATGGTGTTACTTCTTCCGTTCCTGGGCCTTATTCACCGGAAGTtgttTCACCAAACCGTCCAAATGAATATACACAAAAATCAGATGACTGTGGCAATAATAACAGTCCTAATCCAAATTTAACAGTATTACCGAGATGTACATCAGAtcctaatttatttgtttccgaAGAACAAGTATCAGAAACAAATaaacaaataacGCCAGAGTTTACATtccaacaaacaaataattggtTAATATGCAACCGATTTAATAGTTTCTTACAAACTTTCGCTGGATTTTCCGGTTCAGACATGTTGCGCATGTCTAAAGAAGATTTGATACAAATATGCGGTCAAGCTGATGGTATTAGACTTTTCAATGCTTTACATTCaaagCGTATTGCTCCGAAATTGACTTTATACGTATGTcgagaaaatagaaatttatatcatGCAATTTATTTGACAACACATAGCAGCAATGAATTGTGCcaaaaacttacaaatttaattggcGTTCCTAACGACCAAATTCACAATGTGTACTTCCAAGGTCCCCACGGAATTCATGTACATGTTAATGATGATGTTATATGCCATATTAAAGAGGAATCAATGTTTTCTATTGATATTGTTTCCGATAATAATggatatattatcattttaaaaccaattattaaataa
- Protein Sequence
- MDFQLYDYSENNFTNERFHDLKNSWAIPSDASMESNEEYFNWTNDLKLALGNPKQYNVNTIATSSAGKYVTGNEQTQNPKLENRKRKFFSNAVENTCKIQIVDELKDPLQLSPNNTIIEKRNLDKRENLTGTRIPSWPVDEIADNLTAELNGTLTNLSAEFGNTTYNVSDALLALPSLTVFKQEAPSPTSHDNAATKTNQPNQSVAQTTATNDFSDSNNNQNSINTTLQNLLSSGYTGIQSPIENGGVVDSPSSQDGLRNVVSSSDLSEDSRFQYVLAAATSIATKVNEDTLTYLNQGQSYEIKLKKLGDLSNYRGRILKSVIRICFYERRLQYMEKEQMSLWQNSRPGDRIIEVDVPLSYGLCEVTQPPNQLNAVHFLWDPTKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQVETYLNGDSINPPKRLHAAACQIKVFKLKGADRKHKQDREKIMKRPPSEQEKYQPSYDCTVLNDIPNDFVVPAPLPALNGVTSSVPGPYSPEVVSPNRPNEYTQKSDDCGNNNSPNPNLTVLPRCTSDPNLFVSEEQVSETNKQITPEFTFQQTNNWLICNRFNSFLQTFAGFSGSDMLRMSKEDLIQICGQADGIRLFNALHSKRIAPKLTLYVCRENRNLYHAIYLTTHSSNELCQKLTNLIGVPNDQIHNVYFQGPHGIHVHVNDDVICHIKEESMFSIDIVSDNNGYIIILKPIIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -