Pcha019799.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- Nfil3
- Assembly
- GCA_002278615.1
- Location
- NEEE01002347.1:16905-43800[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 1.9e-11 44.0 3.5 2 59 114 171 113 175 0.93 2 2 0.026 27 5.1 0.1 39 61 452 474 435 477 0.74
Sequence Information
- Coding Sequence
- ATGCATCCAGACGCCGGAATGTTATTCTCGACGCCTCCAGACGTCTTAAAGAGCCGTATGATGGTGGCGGAATTTGTCACCCGGAGTCAGTCCGGTTCACCGATAAATGGTGAAATCCCAATTTTGAATTCAACCATGCCGGGCAGCCAAGGTCGTGAAGGTTCTCTAACTAACGCCCCAAACAGTTTCCTCAATCAAGAGGTAATTATGAGGCCTGTTAGTCCGACCACGCCAAACCCCGAAAATTTTTCATCTAATTTTGAGCTTGCTGCACATATTAAAcgtaaagaattattttctcaACGTAAACAACGCGAATTTATCccagataataaaaaagatgatAATTATTGGGATAGGAGACGTCGCAATAATGAAGCAGCAAAACGTTCTCGAGAAAAGAGACGATTTAATGATATGGTTTTGGAACGTCGCGTTGTTGAATTAACCaaagaaaatcatttattgaaaGCGCAACTTGAAGCTATTAAAGAAGAGTATGGAATTTGTGgggaaaatattgtttgtattgAAAAAGTGATGGCTACTTTACCTACAAGTGAACAAGTATTAAGTATCACAAAACGGCCTAAGTTAAGTGCCGGACCACCGTCAACTTTATTCCTACAATCTTCACCGAGCCCTATTCCTACTTCAGTAATTCATCAGCCAGTTAGTCACCCAGTTATTGGTTCACCTCCCCCATCTGTTTCTCATTCATCCTCGTTAAATCCACACCATCTTCACCTGCACCATCCACACCCAGCTGGAGCTCTCCATGAAACCGCTGTATATAATCATCACCAAATCCACCCGCATCACGAACCAGAAGCATATCACCGAAGCCCATATAGTTACCAGCAATCATTCCCAATTCAATATCAACACGCCAGCTCTATTACAGCTTCAAATAATAACGCTCTTAATTTATCCTCACGATCACGAGCACGTTCACGATCTCGATCTGGAAGCCGAATGCAAAGTCCATTTGAAGTGTCCAGTGGAAGTGGTTCGGGCGATGAAGGTGTTTCCATACCTCCTCCTACATCTGGAAACGGTGCACCAAACACTACTCCAGACTCAAATAATAGTTTACCATTAAAATTGAGACATAAGTCACATTTGGGAGACAAAGAGGCTGCTAGTACACTCTTGTCTCTTCAGAATATTAAACAAGAACCTGGTCCAAGAGCAAGTCCTCCATGGGATGGAGAGGGTTCAAGTGATGAAAGAGATTCTGGTATCTCATTGGGAGGTGAATGGTCTGGAAACTCAGCAGCTGCTGCTGTTGCAGCAATGGCTTCTGCACTTCATAAACAATCTCAACTTGTTAATACTGAAGAAGCAGATTCTGATAATAAACACAGATTGCATTCCGAAATTGTGCGCCTATCTACAGAGGTAGCAACATTGAAATCGCtagttattagaaataaagacACTTCAAAAATAACTGCTGCGCAGCACTGA
- Protein Sequence
- MHPDAGMLFSTPPDVLKSRMMVAEFVTRSQSGSPINGEIPILNSTMPGSQGREGSLTNAPNSFLNQEVIMRPVSPTTPNPENFSSNFELAAHIKRKELFSQRKQREFIPDNKKDDNYWDRRRRNNEAAKRSREKRRFNDMVLERRVVELTKENHLLKAQLEAIKEEYGICGENIVCIEKVMATLPTSEQVLSITKRPKLSAGPPSTLFLQSSPSPIPTSVIHQPVSHPVIGSPPPSVSHSSSLNPHHLHLHHPHPAGALHETAVYNHHQIHPHHEPEAYHRSPYSYQQSFPIQYQHASSITASNNNALNLSSRSRARSRSRSGSRMQSPFEVSSGSGSGDEGVSIPPPTSGNGAPNTTPDSNNSLPLKLRHKSHLGDKEAASTLLSLQNIKQEPGPRASPPWDGEGSSDERDSGISLGGEWSGNSAAAAVAAMASALHKQSQLVNTEEADSDNKHRLHSEIVRLSTEVATLKSLVIRNKDTSKITAAQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -