Pcha011644.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- slbo
- Assembly
- GCA_002278615.1
- Location
- NEEE01001974.1:11853-14145[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 5.9e+03 -2.4 0.2 50 63 65 76 50 78 0.51 2 2 4.4e-16 4.5e-13 49.2 10.9 3 63 289 349 287 351 0.95
Sequence Information
- Coding Sequence
- ATGGACTCCCCGCAAATGTACGATTCTCATCAAGGCGGTCAGCCAAATGGTGTCATGAACTCCGATATGAAAAAATCCGCAAATAATTCATCcccgaataataataataataataacaattcatcgaatacaaataataataatttaacaactttaaataataataatggtaCAACTAAACAGACAGCagcattattaaaacaacacCAATTAGCGCAACAATATCAAGCGCATGGTGGTGATTTAAGCGATTTAAATACACCTGAAATAAGTCTcgatttgcaaaatttaatagacGATTCACAGTTTAATGAAGGCCTTTTCTCGGATATATTAGCACAAAATCCTGCGGTAGCAGGAAAACATGTACAAAATTTACATGGAGGCGGACGACAAATCATGCAGGCAACTGCAGCGAATAGATACCCAAGTACAACCCTTGCGTACATGCCGCAACCTGTTCACAGCGGAGCAGCGTCCGCGGGTTCATACGTAGCAGCGGGAGGTGGTGCACCGAACGGTCCAAACAGTGATTCAAACTCCTCGATGGGAAGTGATGTCCCTAGCATTAAGGAAGAACCGGTAGACCCTCAAGAATATCGTCGACAATGTGCAGCTGCGGGCTACATGCCCGGAGGGTACACCGCAAACACCCCAACATTCGCGACTTTAGCCCCAGGAGGTGTTCTCCACCACCAACACCATCAGCTCCAAGGGTTGGGTGGTGCAACACCTGGTGCTACTTTACCTGGGATGAAAGGCATTCGAAACGGTGCAATGGGACATCATCCGCATGCGCATTCCCATCACAGTGCCGTGGGAGCTGGTGCACGCAAACCCTTAAAACCAACCGATAAAAGTAGCGATGAATACCGCCGAAGACGCGAACGGAATAACATCGCTGTACGAAAAAGCCGTGAAAAGGCAAAAGTGCGAACACGAGAAACTGAAGAGAAAGTCAAATTATTGGTTAAAGAAAATGAACGTCTCACAAAACGGATTGAACTCCTAACGGAGGAGTTAAATGTCCTACGGtcgttattttcaaatgtggGAGTTTTACCAGAGCATATTCAtcgagaaataaataaacacctGGACTCCTTCCAGCTACAGCATCAGCAGCAACATATgTCAGAAGATAGACGAGTGCTGGAAATACTTCAAGAATATGGACCCTAG
- Protein Sequence
- MDSPQMYDSHQGGQPNGVMNSDMKKSANNSSPNNNNNNNNSSNTNNNNLTTLNNNNGTTKQTAALLKQHQLAQQYQAHGGDLSDLNTPEISLDLQNLIDDSQFNEGLFSDILAQNPAVAGKHVQNLHGGGRQIMQATAANRYPSTTLAYMPQPVHSGAASAGSYVAAGGGAPNGPNSDSNSSMGSDVPSIKEEPVDPQEYRRQCAAAGYMPGGYTANTPTFATLAPGGVLHHQHHQLQGLGGATPGATLPGMKGIRNGAMGHHPHAHSHHSAVGAGARKPLKPTDKSSDEYRRRRERNNIAVRKSREKAKVRTRETEEKVKLLVKENERLTKRIELLTEELNVLRSLFSNVGVLPEHIHREINKHLDSFQLQHQQQHMSEDRRVLEILQEYGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -