Pcha014891.1
Basic Information
- Insect
- Pogonus chalceus
- Gene Symbol
- XBP1
- Assembly
- GCA_002278615.1
- Location
- NEEE01010750.1:1599-3451[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8e-15 8.2e-12 45.2 16.4 2 63 50 111 50 127 0.94
Sequence Information
- Coding Sequence
- atGAGTACACCGGTTATAATAACGTTACCAAAATATGTGCCTGCCACAAATAATGGTGGgcctatttttaaagattttgtaGATGGTAAAAATCAGATTGAAACAACAATGAAAGGACGAAAACGAAGACTTGATCATTTAACATGGGAAGAAAAAATGCAGCGCaaaaaattaaaaaaccggGTGGCTGCCCAAACTTCAAGAGACCGGAAGAAACAAAGAATGGAAGAAATGGAAAACACCATACAAGAATTACTTGAAAAAAatgaagatttaataaatgaatgcaGTAAACTTAGAGCATTAAACAAGAAACTCTCTGTCGAAAATAACAGTTTGCgaaaccaaaaatattcaacaatgtCACAATGTAGTTGTCGCGTTCAAAACAGTTCTGTCGATTGTAATCTTTCCAACGGATCAGCAGAATCCAATTCCCCTCTGCCGCAGGGACAAAGAATACAATCGGCAGCTGCTCTGGACAGGCGACAAACTACGATGGCAGTATTGAAGATTGTGTTGGCTTGCCTGTTGTGTCAGACCTCCTCGCGGACCTCGACTCAGAACTCGACATTGATAAACTTGAAGAATTCGCTCAAAGTTTACTCGAAGATATCACCGCAGACCTGGAAGCTGCTTCTTCAGAAAAACAGactaCAACAAGTGATATCCAACAAGATAACCCAAGAAAAATGGTGGGGTCGACACCAGAACAATTGGAACCCAGTCGAAGCGAAAGCTTAA
- Protein Sequence
- MSTPVIITLPKYVPATNNGGPIFKDFVDGKNQIETTMKGRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKQRMEEMENTIQELLEKNEDLINECSKLRALNKKLSVENNSLRNQKYSTMSQCSCRVQNSSVDCNLSNGSAESNSPLPQGQRIQSAAALDRRQTTMAVLKIVLACLLCQTSSRTSTQNSTLINLKNSLKVYSKISPQTWKLLLQKNRLQQVISNKITQEKWWGRHQNNWNPVEAKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -