Pcal033348.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Zmiz1
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010004865.1:74564-79430[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.025 4.3e+02 1.7 0.7 4 24 460 480 457 485 0.91 2 2 9.6e-26 1.7e-21 76.7 4.4 1 50 540 589 540 589 0.98
Sequence Information
- Coding Sequence
- ATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAGGACATCCCCTCGCAATTCAATCAGATGCAGAGCCAACATGGAATACCCCACCAAACGTACCCCGTGGCGGGGTATGGCCAAAGAGGACCAATGGCAGGAATGGGGCCAGTCGGGATGAACAACTTCAACGGCATAGGCACAATGAGCCCGATGCACACTATGAATTCCATGAATTCGATGAACAGTATGAGTGGCATGAACACGATGAATCCTATGACAATGGGAGGAATGAACGGTATGAACGGTATGAGCGGTATGAATGCTATGAGTGGAATGACACCCATGAACTCCATGAGCAACATGGGCAACGTAGCCATGAACAACATGATGGGACCCAATAACATGCAAATGAACAAAATGCAGGCTCAATCGCATCAAGGCTATCCGCGAAGATTAGCGCCTTATCCGAACCCAGCCATGCACATGGCGCAAAAGCGACAGCAAGTTCCGTATCCCGCTCAGAACCCTACGGCTATGCAGCAGGGCTTCAACGGCATGACGGCAGCGCCGAATTATCCGAACGCCTATCCCACCGGGGCGAGGCCGAATTTTCAACAGCAGTATCAGTCCATGCAGAGCATGAATCCCACAGGGGCTGGTTTCGGACCCAACGCGATGATACGAGGAGCGAATATGAGGCAAACGGCACCGGCTTACAACACCCCCTCTCAGACGGCAGCAGCGAACCAATACGGTTATGGAAATAATGGCGTTTCGGGGGTTTGTATGGTACCCCCTACTTCGGTCGGTAACCAATTCGTCGGCCATCAGCAAAATACGGGAGTAGGATATGGTGGGAATGCGTCGTACGGCGCGTCGGGCGTGGCGACCAGTCAGTATCAGCAGGATGTGGCATCGATGAGGTCGACAAACGGAGGTAACATGAATTATCAGCACAGTCCCATCCCCGGTAATCCGACGCCACCGTTGACACCCGCCACCAGTATGCCGCCTTACATCAGTCCGAATCCGGACATCAAGCCTAACTTCAATGAGATGAAATCGCCCGGCAATATTCAGAATGACGAATTGAGACTAACATTCCCCGTGAGAGACGGTATAATTCTTCCACCTTTCCGCCTAGAGCATAATTTGGCTGTTAGCAATCACGTGTTTCAATTGAAGTCCACGGTGCATCAAACGTTAGCGTGGCGATCAGATCTGGAGTTGCAGCTCAAATGTTTCCATCATGAGGATAGGCAGATGAATACGAATTGGCCGGCGAGTGTGCAAGTCTCCGTTAACGCGACTCCCCTCGTGATCGATCGCGGGGAGAACAAATCTTCCCACAAGCCTCTCTATTTGAAGGACGTATGTCAAGCAGGAAGGAACACGATACAGATTACCGTATCCACGTGCTGTTGTTCGCATCTATTTGTACTCCAATTGGTTCATCGACCCAGTGTACGAAGTGTGCTTCACGGATTACTACGTAAAAGATTGTTGACGGCAGAACATTGTATAACGAAAATCAAAAGAAACTTCAGTAATACAATGTCAAACAACGGTATACAGTCAGAGAAAGACGTAGTGGAACAAACAGCACAAAAGGTATCTTTAAAATGTCCTATCACCTTTAAACGCATTACACTGCCAGCCAGAGGACACGATTGCAAGCATACACAGTGTTTCGATTTGGAATCGTACTTGCAATTGAATTGTGAACGAGGAAACTGGAGATGCCCAGTATGCTCGAAACCCGCACAGCTGGAAGGCTTGGAGGTCGATCAGTATATGTGGGGTATTTTGAATACAATAAATACCGCAGAAGTTGACGAAGTGACGATAGACTCGCTCGCCAACTGGAAACCCACCAAGAATTCACCTGTTAAGTCTGAAGAAGAGAATGATTGTAAACGAACAACCAAGGCGATGTCACCGGGCAGTATGAATATGCCAACTATGAACAATTGGGATATGAACCAAGCTATGAGTCCTTATATACCGCCCGACATGAATAGTATCGTGAGTGGTTCGATGATGAATAATACATCTTCCACGTACCAGAATAACAGCATGAACCACCGGAATACATCCGGCGGAACGTACGAGATAAATTCCGGGACGAATACTATCGGCAATAATGATTATGTCAGCGGAACAGGTCCGCTTTCACACTTAAACGAATCCGTTAATTCTTTAGATCCTCTCAATGCTATGGAGAAATCACTCAACGACCAAATGCCTCATACTCCTCATACGCCACATACCCCGCAATCTACTCCTCACACACCGGCTGGTGGTGCCAGTGGTCCGCCAAGCGTTCCGCCAGCATCACAAGAATCTACGGGAAATCACAATACCTCCGGCAATACAAGTACAACTATAAATAATGACACCGCTACGGACATACCGTCGGACTTAAATTTCGATCCCGCCGCAGTTATAGATGGAGAAGGTACCGGCCAAGAGGGATTGAATCTCTTACCAGACAATGTAGATGCGATGGATCTCCTCTCGTATCTCGAACCACCGGATCTAAACACTCCACCTAGTAGCGGTGCCAGCAGTGGCAATCCTTCCTCTAACGACGACATATTAGCACTCTTCGAGTAA
- Protein Sequence
- MVAAASATATATASVVAMQDRQDIPSQFNQMQSQHGIPHQTYPVAGYGQRGPMAGMGPVGMNNFNGIGTMSPMHTMNSMNSMNSMSGMNTMNPMTMGGMNGMNGMSGMNAMSGMTPMNSMSNMGNVAMNNMMGPNNMQMNKMQAQSHQGYPRRLAPYPNPAMHMAQKRQQVPYPAQNPTAMQQGFNGMTAAPNYPNAYPTGARPNFQQQYQSMQSMNPTGAGFGPNAMIRGANMRQTAPAYNTPSQTAAANQYGYGNNGVSGVCMVPPTSVGNQFVGHQQNTGVGYGGNASYGASGVATSQYQQDVASMRSTNGGNMNYQHSPIPGNPTPPLTPATSMPPYISPNPDIKPNFNEMKSPGNIQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHQTLAWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKSSHKPLYLKDVCQAGRNTIQITVSTCCCSHLFVLQLVHRPSVRSVLHGLLRKRLLTAEHCITKIKRNFSNTMSNNGIQSEKDVVEQTAQKVSLKCPITFKRITLPARGHDCKHTQCFDLESYLQLNCERGNWRCPVCSKPAQLEGLEVDQYMWGILNTINTAEVDEVTIDSLANWKPTKNSPVKSEEENDCKRTTKAMSPGSMNMPTMNNWDMNQAMSPYIPPDMNSIVSGSMMNNTSSTYQNNSMNHRNTSGGTYEINSGTNTIGNNDYVSGTGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTSTTINNDTATDIPSDLNFDPAAVIDGEGTGQEGLNLLPDNVDAMDLLSYLEPPDLNTPPSSGASSGNPSSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863647;
- 90% Identity
- iTF_00129412;
- 80% Identity
- -